; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017865 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017865
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionrRNA processing protein-related
Genome locationscaffold373:3323509..3324399
RNA-Seq ExpressionMS017865
SyntenyMS017865
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0034399 - nuclear periphery (cellular component)
InterPro domainsIPR008610 - Eukaryotic rRNA processing


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035578.1 putative rRNA-processing protein EBP2-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.5e-12989.04Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDF--ESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFY
        MGVSD+ D FLNEDTMEDDDLDSEDSDF  ESES+SEE++DVKLSEPSK A+YNADGLLDKLGDISWPEN GWIHKLSLDIDQEKEVDVNDDLARELAFY
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDF--ESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFY

Query:  TQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
        TQALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
Subjt:  TQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS

Query:  GFAGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR
        GF+  DKGGEMDL+FEDGKAF+RS GKKR GVSPGDRSGGKARH GGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETTNDIR FN G+LSSNK+RK+
Subjt:  GFAGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR

Query:  S
        S
Subjt:  S

XP_022155439.1 probable rRNA-processing protein EBP2 homolog [Momordica charantia]1.1e-14898.99Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
        MGVSDKDDPFLNEDTME DDLDSEDSDFESESDSEEDKDVKLSEPSKTAI+NADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
        AGGDKGGEMDLAFEDGKAFERSGKKR GVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
Subjt:  AGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS

XP_022156156.1 probable rRNA-processing protein EBP2 homolog [Momordica charantia]5.5e-13792.62Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
        MGV DK D FL+EDTMED+DLDSEDSDFESES+ EE++DVKLSEPSK AIYNADGLLDKLGD SWPENAGWIH+LSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQGARMAFEKFQSLGLPFLRP+DYYAEMVKTDTHMEKVKGRLLAEQRKMEEA+ERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
        AGGDKGGEMDL FEDGK FERSGKKR GVSPGDRSGGK RH GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETT+DIR FNKG+LSSNKKRKRS
Subjt:  AGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS

XP_022958567.1 probable rRNA-processing protein EBP2 homolog [Cucurbita moschata]1.9e-12989.37Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDF--ESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFY
        MGVSD+ D FLNEDTMEDDDLDSEDSDF  ESES+SEE++DVKLSEPSK AIYNADGLLDKLGDISWPEN GWIHKLSLDIDQEKEVDVNDDLARELAFY
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDF--ESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFY

Query:  TQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
        TQALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
Subjt:  TQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS

Query:  GFAGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR
        GF+  DKGGEMDL+FEDGKAF+RS GKKR GVSPGDRSGGKARH GGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETTNDIR FN G+LSSNK+RK+
Subjt:  GFAGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR

Query:  S
        S
Subjt:  S

XP_022995363.1 probable rRNA-processing protein EBP2 homolog [Cucurbita maxima]1.4e-12989.3Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
        MGVSD+ D F+NEDTMEDDDLDSEDSDF SES+SEE++DVKLSEPSK AIYNADGLLDKLGDISWPEN GWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
        +  DKGGEMDL FEDGKAF+RS GKKR GVSPGDRSGGKARH GGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETTNDIR FN G+LSSNK+RK+S
Subjt:  AGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS

TrEMBL top hitse value%identityAlignment
A0A6J1DQA0 probable rRNA-processing protein EBP2 homolog5.1e-14998.99Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
        MGVSDKDDPFLNEDTME DDLDSEDSDFESESDSEEDKDVKLSEPSKTAI+NADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
        AGGDKGGEMDLAFEDGKAFERSGKKR GVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
Subjt:  AGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS

A0A6J1DTZ5 probable rRNA-processing protein EBP2 homolog2.6e-13792.62Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
        MGV DK D FL+EDTMED+DLDSEDSDFESES+ EE++DVKLSEPSK AIYNADGLLDKLGD SWPENAGWIH+LSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQGARMAFEKFQSLGLPFLRP+DYYAEMVKTDTHMEKVKGRLLAEQRKMEEA+ERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
        AGGDKGGEMDL FEDGK FERSGKKR GVSPGDRSGGK RH GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETT+DIR FNKG+LSSNKKRKRS
Subjt:  AGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS

A0A6J1H264 probable rRNA-processing protein EBP2 homolog9.1e-13089.37Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDF--ESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFY
        MGVSD+ D FLNEDTMEDDDLDSEDSDF  ESES+SEE++DVKLSEPSK AIYNADGLLDKLGDISWPEN GWIHKLSLDIDQEKEVDVNDDLARELAFY
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDF--ESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFY

Query:  TQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
        TQALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS
Subjt:  TQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKS

Query:  GFAGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR
        GF+  DKGGEMDL+FEDGKAF+RS GKKR GVSPGDRSGGKARH GGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETTNDIR FN G+LSSNK+RK+
Subjt:  GFAGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR

Query:  S
        S
Subjt:  S

A0A6J1IZU9 probable rRNA-processing protein EBP2 homolog1.3e-12888.67Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDS-EEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYT
        MGVSDKD  FLNEDTME+DDL +EDSDFESES+S EE+++VKLSEPSKTAIYNADGLLDKL DISWP+N  WIH+L LDIDQEKEVDVNDDLARELAFYT
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDS-EEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYT

Query:  QALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSG
        QALQG RMA EKFQSLGLPFLRPSDYYAEMVKTDTHM KVKGRLLAEQRKMEEAEERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSG
Subjt:  QALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSG

Query:  FAGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
        FAGGDKGGEM+L+FEDGKAFERS GKKR GVSPGDRSGGKARH  GGKGKN KKK+DFRDSKFGFGGRKSLKKQNTAETTNDIR FN  +L SNK+RKRS
Subjt:  FAGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS

A0A6J1K7Q8 probable rRNA-processing protein EBP2 homolog7.0e-13089.3Show/hide
Query:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
        MGVSD+ D F+NEDTMEDDDLDSEDSDF SES+SEE++DVKLSEPSK AIYNADGLLDKLGDISWPEN GWIHKLSLDIDQEKEVDVNDDLARELAFYTQ
Subjt:  MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQ

Query:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
        ALQG RMA EKFQSLGLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAK+LAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF
Subjt:  ALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGF

Query:  AGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS
        +  DKGGEMDL FEDGKAF+RS GKKR GVSPGDRSGGKARH GGGKGKNP KKRDFRDSKFGFGGRKS+KKQNTAETTNDIR FN G+LSSNK+RK+S
Subjt:  AGGDKGGEMDLAFEDGKAFERS-GKKRLGVSPGDRSGGKARH-GGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS

SwissProt top hitse value%identityAlignment
O13802 Probable rRNA-processing protein ebp21.4e-1531.51Show/hide
Query:  PFLNEDTMEDDDLDSEDSDFESESDSEE---DKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVD-VNDDLARELAFYTQALQG
        P +      D + +SE SD    SD E    ++D  L    K AI N   L +    I +P++  ++   ++   +   ++ V DDLARELAFY Q +  
Subjt:  PFLNEDTMEDDDLDSEDSDFESESDSEE---DKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVD-VNDDLARELAFYTQALQG

Query:  ARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGD
         + AF K +   +   RP DY+AEM+K+D HMEKV+  L+ E    + +++ +K RE K+  K++Q  K +ER ++KKE +E +   +++       GGD
Subjt:  ARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGD

Query:  KGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR
           E D       A   + KK      G RS  K+R        P  KR  ++ K+GFGG K   K N  ++        KG L + K +KR
Subjt:  KGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKR

P36049 rRNA-processing protein EBP21.3e-1629.32Show/hide
Query:  DKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWI--HKLSLDIDQ---------------------
        ++++  L+ + +   D +SED D ESE+DSEED+DV   E S+      +     L D+ +  +A  +  HKL+++  +                     
Subjt:  DKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWI--HKLSLDIDQ---------------------

Query:  ----------EKEVDVNDDLARELAFYTQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQA
                  E   D+ DD  RELAFY Q+L    +A ++ + L +PF RP DY+AEMVK+D HM+K+KG+L+ E    +  EE R+ R+ K+  K++Q 
Subjt:  ----------EKEVDVNDDLARELAFYTQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQA

Query:  QKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMDLA-FEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKK
          L++R  +K+E +E +K  + +R         K  E+D + F  G   E  GK+       DR              P  KR  +++K+G GG K  K+
Subjt:  QKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMDLA-FEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKK

Query:  QNTAETTNDIRSFNKGTLSSNKKR
        +N A ++ D+  F+   +     R
Subjt:  QNTAETTNDIRSFNKGTLSSNKKR

Q9D903 Probable rRNA-processing protein EBP23.8e-1630.13Show/hide
Query:  DDPFLNEDTMEDDDL---DSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDI----------------DQEKEVDV
        D P L+E   E D     D E  D  S    +   +V L +P K A+ +  GL   L +  +  +  W+ +L + +                DQ+K V+ 
Subjt:  DDPFLNEDTMEDDDL---DSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDI----------------DQEKEVDV

Query:  NDDLARELAFYTQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIES
         DD  RE++FY QA         +   L +P  RP+DY+AEM K+D  M+K++ +L  +Q  ME++E+ ++ R  ++  K++Q + L++R ++K   + +
Subjt:  NDDLARELAFYTQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIES

Query:  VKKWRKQRQKSGFAGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSF----
        +KK++K     GF+      ++D    D K  ERS K          +GGK   G    K P  KR +++ KFGFGG+K   K NT E+ +D+ SF    
Subjt:  VKKWRKQRQKSGFAGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSF----

Query:  --NKGTLSSNKK
           KG+    KK
Subjt:  --NKGTLSSNKK

Q9I8J6 Probable rRNA-processing protein EBP25.0e-1627.15Show/hide
Query:  EDDDLDSEDSDFESESDSEEDKDVKLS------------EPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDID--------------QEKEVDVNDD
        ED+     DSDF++   ++++     S            E  K    +A GL   L D+       W+ +L + +D                 +++  DD
Subjt:  EDDDLDSEDSDFESESDSEEDKDVKLS------------EPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDID--------------QEKEVDVNDD

Query:  LARELAFYTQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKK
          RE+ FY QA      +  + + L +   RP DY+AEM KTD HM+K++ +L  +Q  ME++E+ ++ R  ++  K++Q + L++R K+K   +  +KK
Subjt:  LARELAFYTQALQGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKK

Query:  WRKQRQKSGFAGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSS
        ++            KG    L F +G   +++ KK    + G  +  KA++       P  KR ++D KFGFGG+K   K NT  + ND+  F +G+++ 
Subjt:  WRKQRQKSGFAGGDKGGEMDLAFEDGKAFERSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSS

Query:  NK
         K
Subjt:  NK

Q9LUJ5 Probable rRNA-processing protein EBP2 homolog1.2e-8363.18Show/hide
Query:  LNEDTMEDDDL------DSEDSDFESESDSEEDKDV--KLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQAL
        L ED + DD++      D+ DS+ ES SDS+ + ++  KL+EP+KTAIYN DGLLDKL DISWPE+  W HKL+++IDQ   VDVNDDLARE AFYTQAL
Subjt:  LNEDTMEDDDL------DSEDSDFESESDSEEDKDV--KLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQAL

Query:  QGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAG
        +G R AF K   +G+ FLRP++YYAEMVK+D HMEKVK RLL E++++EE+EERRKAR+ KR+AKE+Q+QK+KERAK+KK+ IESVKKWRKQRQ+SGF+ 
Subjt:  QGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAG

Query:  GDKGGEMDLAFEDGKAFER-SGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIR-SFNKGTLSSNKKRKR
         DK GE +L FE GK+F+R  GKKR GVSPGDRSGGK R     G    KKR+FRDSKFG GGRK L KQNTAETTND +  F  G  S NK++KR
Subjt:  GDKGGEMDLAFEDGKAFER-SGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIR-SFNKGTLSSNKKRKR

Arabidopsis top hitse value%identityAlignment
AT3G22660.1 rRNA processing protein-related8.8e-8563.18Show/hide
Query:  LNEDTMEDDDL------DSEDSDFESESDSEEDKDV--KLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQAL
        L ED + DD++      D+ DS+ ES SDS+ + ++  KL+EP+KTAIYN DGLLDKL DISWPE+  W HKL+++IDQ   VDVNDDLARE AFYTQAL
Subjt:  LNEDTMEDDDL------DSEDSDFESESDSEEDKDV--KLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQAL

Query:  QGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAG
        +G R AF K   +G+ FLRP++YYAEMVK+D HMEKVK RLL E++++EE+EERRKAR+ KR+AKE+Q+QK+KERAK+KK+ IESVKKWRKQRQ+SGF+ 
Subjt:  QGARMAFEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAG

Query:  GDKGGEMDLAFEDGKAFER-SGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIR-SFNKGTLSSNKKRKR
         DK GE +L FE GK+F+R  GKKR GVSPGDRSGGK R     G    KKR+FRDSKFG GGRK L KQNTAETTND +  F  G  S NK++KR
Subjt:  GDKGGEMDLAFEDGKAFER-SGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIR-SFNKGTLSSNKKRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTATCGGATAAAGATGATCCCTTCTTAAATGAAGATACAATGGAAGATGATGATCTTGATAGCGAGGATTCTGATTTTGAATCTGAATCTGATTCCGAAGAAGA
CAAAGATGTGAAATTGTCTGAACCATCAAAGACTGCTATATATAATGCAGACGGTCTCCTTGATAAGCTTGGAGATATTAGCTGGCCGGAAAACGCGGGATGGATACACA
AGCTCTCTCTTGATATTGATCAAGAAAAAGAGGTGGATGTGAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGGGCAAGGATGGCCTTTGAG
AAATTTCAATCTTTAGGACTCCCATTTCTCAGACCTTCAGACTATTATGCAGAGATGGTGAAGACAGATACTCACATGGAGAAAGTGAAAGGTCGGCTGCTGGCCGAGCA
GAGAAAGATGGAGGAGGCCGAGGAAAGAAGGAAAGCTAGAGAAGCGAAGAGATTAGCCAAGGAGATTCAAGCCCAGAAGCTAAAGGAGAGGGCTAAGCAGAAGAAAGAAG
AGATTGAATCTGTCAAGAAATGGAGGAAGCAAAGGCAAAAGAGTGGCTTTGCTGGAGGCGACAAAGGTGGTGAGATGGACTTGGCCTTTGAAGATGGAAAAGCATTTGAG
AGGTCCGGTAAGAAGAGGCTGGGGGTGTCTCCGGGCGACCGCTCCGGAGGGAAGGCAAGACATGGAGGTGGAAAAGGAAAAAATCCAAAGAAGAAGAGAGACTTCAGAGA
TTCCAAGTTTGGCTTTGGCGGGAGGAAAAGTTTGAAAAAGCAGAACACAGCCGAGACAACAAATGATATTAGGAGCTTCAACAAAGGAACCTTGTCAAGTAACAAAAAGA
GGAAGAGATCG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTATCGGATAAAGATGATCCCTTCTTAAATGAAGATACAATGGAAGATGATGATCTTGATAGCGAGGATTCTGATTTTGAATCTGAATCTGATTCCGAAGAAGA
CAAAGATGTGAAATTGTCTGAACCATCAAAGACTGCTATATATAATGCAGACGGTCTCCTTGATAAGCTTGGAGATATTAGCTGGCCGGAAAACGCGGGATGGATACACA
AGCTCTCTCTTGATATTGATCAAGAAAAAGAGGTGGATGTGAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGGGCAAGGATGGCCTTTGAG
AAATTTCAATCTTTAGGACTCCCATTTCTCAGACCTTCAGACTATTATGCAGAGATGGTGAAGACAGATACTCACATGGAGAAAGTGAAAGGTCGGCTGCTGGCCGAGCA
GAGAAAGATGGAGGAGGCCGAGGAAAGAAGGAAAGCTAGAGAAGCGAAGAGATTAGCCAAGGAGATTCAAGCCCAGAAGCTAAAGGAGAGGGCTAAGCAGAAGAAAGAAG
AGATTGAATCTGTCAAGAAATGGAGGAAGCAAAGGCAAAAGAGTGGCTTTGCTGGAGGCGACAAAGGTGGTGAGATGGACTTGGCCTTTGAAGATGGAAAAGCATTTGAG
AGGTCCGGTAAGAAGAGGCTGGGGGTGTCTCCGGGCGACCGCTCCGGAGGGAAGGCAAGACATGGAGGTGGAAAAGGAAAAAATCCAAAGAAGAAGAGAGACTTCAGAGA
TTCCAAGTTTGGCTTTGGCGGGAGGAAAAGTTTGAAAAAGCAGAACACAGCCGAGACAACAAATGATATTAGGAGCTTCAACAAAGGAACCTTGTCAAGTAACAAAAAGA
GGAAGAGATCG
Protein sequenceShow/hide protein sequence
MGVSDKDDPFLNEDTMEDDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIYNADGLLDKLGDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAFE
KFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFAGGDKGGEMDLAFEDGKAFE
RSGKKRLGVSPGDRSGGKARHGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS