; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017887 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017887
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein LITTLE ZIPPER like
Genome locationscaffold373:3516971..3517344
RNA-Seq ExpressionMS017887
SyntenyMS017887
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647881.1 hypothetical protein Csa_000025 [Cucumis sativus]1.2e-2979.17Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
        MC+SAT+S  FH I +SKNRR  KRS  QV RLTSRRRC EEK+GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLAL+TE QKKF HL++
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-3384.38Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL+SRRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
XP_022159679.1 protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia]6.4e-4298.98Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
        MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLT RRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
XP_022159680.1 protein LITTLE ZIPPER 2-like isoform X2 [Momordica charantia]8.9e-44100Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
        MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]1.3e-3184.38Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL SRRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
TrEMBL top hitse value%identityAlignment
A0A0A0KKF8 Uncharacterized protein4.3e-2878.12Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
        MC+SAT+S  FH I +SKNRR  KRS  QV RLT RRRC EEK+GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLAL+TE QKKF HL++
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X24.3e-44100Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
        MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X13.1e-4298.98Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
        MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLT RRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD
A0A6J1E3C5 protein LITTLE ZIPPER 1-like7.9e-3081.25Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
        MCISAT+S  FHQI TSKNRRR KRSKLQV RLT RRRC EEK+GKDIELKNLQLYL+NQTII+EN+KLRE+ANILHQEN+ALMTE QKKF HL++
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
A0A7J0FTG6 Uncharacterized protein2.1e-2264.58Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
        MCI ATE  P   +     ++R KRSK++VQRL  R+R  EEKVGKD+ELKNL+LY EN TI+EENEKLR++A++LHQENLALMTE QKKF H DR
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR
SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 11.8e-0743.33Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKK
        MC+S++E+  F    T        +S +++ RL+ RRR   E+  K +E+ NL+LY+ENQ II ENEKL+++A +LHQEN  L + LQ K
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKK
Q9LZX5 Protein LITTLE ZIPPER 21.8e-0741.67Show/hide
Query:  SSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKF
        S+ +H  H SK      ++ L++  LT RRR  +E+  K++E++NL+L++ENQ+II ENE L+++A +LH EN AL   L  K+
Subjt:  SSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKF
Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.3e-0843.33Show/hide
Query:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKK
        MC+S++E+  F    T        +S +++ RL+ RRR   E+  K +E+ NL+LY+ENQ II ENEKL+++A +LHQEN  L + LQ K
Subjt:  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKK
AT3G60890.1 protein binding1.3e-0841.67Show/hide
Query:  SSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKF
        S+ +H  H SK      ++ L++  LT RRR  +E+  K++E++NL+L++ENQ+II ENE L+++A +LH EN AL   L  K+
Subjt:  SSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKF
AT3G60890.2 protein binding4.9e-0842.86Show/hide
Query:  SSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKF
        S+ +H  H SK      ++ L++  LTSRRR    K  K++E++NL+L++ENQ+II ENE L+++A +LH EN AL   L  K+
Subjt:  SSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTATCAGTGCAACAGAGAGCAGCCCATTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTGAAAAGATCCAAACTTCAAGTTCAGAGGCTCACCAGCAGGAG
GAGATGCACTGAGGAGAAGGTGGGGAAGGATATTGAGCTGAAGAATCTACAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAGAGCCA
ATATTCTTCATCAAGAGAACTTGGCCTTAATGACTGAGTTACAGAAAAAATTCCAACATTTGGATCGCTTTGAC
mRNA sequenceShow/hide mRNA sequence
ATGTGTATCAGTGCAACAGAGAGCAGCCCATTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTGAAAAGATCCAAACTTCAAGTTCAGAGGCTCACCAGCAGGAG
GAGATGCACTGAGGAGAAGGTGGGGAAGGATATTGAGCTGAAGAATCTACAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAGAGCCA
ATATTCTTCATCAAGAGAACTTGGCCTTAATGACTGAGTTACAGAAAAAATTCCAACATTTGGATCGCTTTGAC
Protein sequenceShow/hide protein sequence
MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD