; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017894 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017894
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold373:3596093..3597970
RNA-Seq ExpressionMS017894
SyntenyMS017894
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1872524.1 hypothetical protein Lal_00016826 [Lupinus albus]9.1e-11692.92Show/hide
Query:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
        R  N+K ARAQ  MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSI+ +KKLYMYINGPGGDLTPSMAIYDTMQS
Subjt:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS

Query:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
        L+SPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLF EL+ KTGQPVEKI +DLSRMKRFNAQEAL+Y
Subjt:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY

Query:  GLIDRIVRPPRIKADAPRKDAGTGLG
        GLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  GLIDRIVRPPRIKADAPRKDAGTGLG

XP_008437161.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo]1.8e-11993.42Show/hide
Query:  KCRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTM
        + RTHNKKAARAQFQMMPIGTPRVPYR PGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS+K YMYINGPGGDLTP+MA+YDTM
Subjt:  KCRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTM

Query:  QSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEAL
        QSL SPVATHCVGYAYN+AAFLLAAGEKGNRFAMPLSRIALQSPAG+ARGQADDIQNEANELLRIRDYLF+ELSKKTGQPVEKI+KDLSR+K FNAQEAL
Subjt:  QSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEAL

Query:  DYGLIDRIVRPPRIKADAPRKDAGTGLG
        DYGLIDRI RPPRIKADAPRKDAGTGLG
Subjt:  DYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_015869008.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Ziziphus jujuba]2.4e-11692.48Show/hide
Query:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
        R HN K +RAQF MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQ+IDEEFSNQILATMLYLDSI+ SKKLYMYINGPGGDLTPSMAIYDTMQS
Subjt:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS

Query:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
        LKSPV THCVGYAYNLAAFL+AAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLF++L++KTGQPVEKI KDLSRMKRFNAQEAL+Y
Subjt:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY

Query:  GLIDRIVRPPRIKADAPRKDAGTGLG
        GLIDR+VRPPRIKADAPRKDAGTGLG
Subjt:  GLIDRIVRPPRIKADAPRKDAGTGLG

XP_022158384.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia]3.7e-125100Show/hide
Query:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
        RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
Subjt:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS

Query:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
        LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
Subjt:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY

Query:  GLIDRIVRPPRIKADAPRKDAGTGLG
        GLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  GLIDRIVRPPRIKADAPRKDAGTGLG

XP_038906920.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida]5.0e-12296.93Show/hide
Query:  KCRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTM
        + R  NKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTM
Subjt:  KCRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTM

Query:  QSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEAL
        QSLKSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYL+DELSKKTGQPVEKIN+DLSRMKRFNAQEAL
Subjt:  QSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEAL

Query:  DYGLIDRIVRPPRIKADAPRKDAGTGLG
        DYGLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  DYGLIDRIVRPPRIKADAPRKDAGTGLG

TrEMBL top hitse value%identityAlignment
A0A1S3ATH1 ATP-dependent Clp protease proteolytic subunit8.6e-12093.42Show/hide
Query:  KCRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTM
        + RTHNKKAARAQFQMMPIGTPRVPYR PGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETS+K YMYINGPGGDLTP+MA+YDTM
Subjt:  KCRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTM

Query:  QSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEAL
        QSL SPVATHCVGYAYN+AAFLLAAGEKGNRFAMPLSRIALQSPAG+ARGQADDIQNEANELLRIRDYLF+ELSKKTGQPVEKI+KDLSR+K FNAQEAL
Subjt:  QSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEAL

Query:  DYGLIDRIVRPPRIKADAPRKDAGTGLG
        DYGLIDRI RPPRIKADAPRKDAGTGLG
Subjt:  DYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A6A4QL77 ATP-dependent Clp protease proteolytic subunit4.4e-11692.92Show/hide
Query:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
        R  N+K ARAQ  MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSI+ +KKLYMYINGPGGDLTPSMAIYDTMQS
Subjt:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS

Query:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
        L+SPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLF EL+ KTGQPVEKI +DLSRMKRFNAQEAL+Y
Subjt:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY

Query:  GLIDRIVRPPRIKADAPRKDAGTGLG
        GLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  GLIDRIVRPPRIKADAPRKDAGTGLG

A0A6A5MD20 ATP-dependent Clp protease proteolytic subunit4.4e-11692.92Show/hide
Query:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
        R  N+K ARAQ  MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSI+ +KKLYMYINGPGGDLTPSMAIYDTMQS
Subjt:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS

Query:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
        L+SPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLF EL+ KTGQPVEKI +DLSRMKRFNAQEAL+Y
Subjt:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY

Query:  GLIDRIVRPPRIKADAPRKDAGTGLG
        GLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  GLIDRIVRPPRIKADAPRKDAGTGLG

A0A6J1DZ88 ATP-dependent Clp protease proteolytic subunit1.8e-125100Show/hide
Query:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
        RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
Subjt:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS

Query:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
        LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
Subjt:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY

Query:  GLIDRIVRPPRIKADAPRKDAGTGLG
        GLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  GLIDRIVRPPRIKADAPRKDAGTGLG

A0A6P3YY14 ATP-dependent Clp protease proteolytic subunit1.2e-11692.48Show/hide
Query:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS
        R HN K +RAQF MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQ+IDEEFSNQILATMLYLDSI+ SKKLYMYINGPGGDLTPSMAIYDTMQS
Subjt:  RTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQS

Query:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY
        LKSPV THCVGYAYNLAAFL+AAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLF++L++KTGQPVEKI KDLSRMKRFNAQEAL+Y
Subjt:  LKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDY

Query:  GLIDRIVRPPRIKADAPRKDAGTGLG
        GLIDR+VRPPRIKADAPRKDAGTGLG
Subjt:  GLIDRIVRPPRIKADAPRKDAGTGLG

SwissProt top hitse value%identityAlignment
Q20F17 ATP-dependent Clp protease proteolytic subunit5.1e-5349.48Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VP+R PGE + QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ E SK LY+YIN PGG +T  +A+YDTM  +K+ V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI
        ++A+F+LA G +G R A+P SRI +  P G +RGQA ++ +E+ E++RIR  +    +++TGQP+ +I++DL R +  +A+EA DYG++D++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI

Q3MDK7 ATP-dependent Clp protease proteolytic subunit 21.1e-5553.89Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VPYR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS +  K +Y+YIN PGG +T  +AIYDTMQ +KS V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ +FLLAAG KG R A+P SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    +AQEA +YGLIDR++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 24.0e-5855.44Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VPYR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS +  K + +YIN PGG +T  MAIYDTMQ +KS V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ +FLLAAG KG R A+P SRI +  P+G  RGQA DI+ EA E+LR+R  L +  +  TGQP+EKI +D+ R    +A+EA +YGLIDR++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q8YP43 Probable ATP-dependent Clp protease proteolytic subunit 33.8e-5653.89Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VPYR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS +  K +Y+YIN PGG +T  +AIYDTMQ +KS V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ +FLLAAG KG R A+P SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    +AQEA++YGLIDR++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic6.3e-10481Show/hide
Query:  KAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPV
        KA+R++ +MMPIGTPRVPYR   EGTWQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD+++ S+++YMY+NGPGGDLTPS+AIYDTM+SLKSPV
Subjt:  KAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPV

Query:  ATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDR
         THCVG AYNLA FLLAAGEKG+RFAMPLSRIALQSPAGAARGQADDIQNEA EL RIRDYLF+EL+K TGQP E++ KDLSR+KRFNA+EA++YGLID+
Subjt:  ATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDR

Query:  IVRPPRIKADAPRKDAGTGLG
        IVRPPRIK DAPR+D   GLG
Subjt:  IVRPPRIKADAPRKDAGTGLG

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 51.8e-3740.69Show/hide
Query:  TPRVPYRTPGEGTWQWV-----DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYA
        +P  P    G+G    V      + + L++ R+I  G  +D++ +N I+A +LYLD+++ +K + MY+N PGG +T  MAI+DTM+ ++  V+T CVG A
Subjt:  TPRVPYRTPGEGTWQWV-----DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYA

Query:  YNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIK
         ++ AFLL+AG KG R+++P SRI +  P G A+G   DI  +ANE+L  +  L   L+  TGQ +EKIN+D  R    +A+EA +YGLID ++  P +K
Subjt:  YNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIK

Query:  ADAP
        A  P
Subjt:  ADAP

AT1G12410.1 CLP protease proteolytic subunit 24.5e-10581Show/hide
Query:  KAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPV
        KA+R++ +MMPIGTPRVPYR   EGTWQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD+++ S+++YMY+NGPGGDLTPS+AIYDTM+SLKSPV
Subjt:  KAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPV

Query:  ATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDR
         THCVG AYNLA FLLAAGEKG+RFAMPLSRIALQSPAGAARGQADDIQNEA EL RIRDYLF+EL+K TGQP E++ KDLSR+KRFNA+EA++YGLID+
Subjt:  ATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDR

Query:  IVRPPRIKADAPRKDAGTGLG
        IVRPPRIK DAPR+D   GLG
Subjt:  IVRPPRIKADAPRKDAGTGLG

AT5G23140.1 nuclear-encoded CLP protease P74.2e-3438.25Show/hide
Query:  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLS
        D+++ L +ER+I I   I+++ S+ ++A +LYL+S   SK ++MY+N PGG +T  +AIYDTMQ ++SP++T C+G A ++A+ LLAAG KG R ++P +
Subjt:  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLS

Query:  RIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV--RPPRIKADA
         + +  P+G   GQA DI     +++R+ D L +   K TGQP++ +  ++ R      +EA  +G+ID ++  RP  +  DA
Subjt:  RIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV--RPPRIKADA

AT5G45390.1 CLP protease P41.1e-3137.21Show/hide
Query:  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLS
        D+   L RER++F+G +ID+  ++ I++ +L LD+ +  K + ++IN PGG L+ +MAIYD +Q +++ V+T  +G A + A+ +L AG KG RFAMP +
Subjt:  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLS

Query:  RIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        RI +  P G A GQA D++ +A E++  ++ +   ++  T +  E++ KD+ R +  +  EA++YGLID ++
Subjt:  RIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

ATCG00670.1 plastid-encoded CLP P4.2e-4241.97Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VP+R+PGEG   WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL   + +K LY++IN PGG +   MAIYDTMQ ++  V T C+G A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGA-ARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI
        ++A+F+L  G    R A P +R+ +  PA +    Q  +   EA ELL++R+ +     ++TG+P+  I++D+ R    +A EA  +G++D +
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGA-ARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATGCAGGACACATAACAAGAAGGCAGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAGGGTGCCTTACAGAACTCCTGGTGAGGGAACTTGGCAATGGGT
TGATTTGTGGAATGCCCTATATCGAGAACGGGTTATCTTCATTGGGCAAAACATCGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATGCTATATCTTGACAGCATTG
AGACGTCCAAGAAACTCTATATGTACATAAATGGCCCTGGTGGAGATCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGAAGAGCCCTGTAGCAACCCAT
TGTGTGGGCTATGCCTATAATCTTGCAGCCTTTCTACTTGCAGCTGGAGAAAAGGGTAACCGCTTTGCGATGCCTCTATCAAGAATTGCTTTGCAATCCCCAGCTGGAGC
TGCTCGTGGTCAGGCTGACGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTTTGATGAGCTTTCCAAGAAAACAGGCCAGCCTGTTGAAAAGA
TTAACAAGGACTTGAGTCGAATGAAGCGCTTTAATGCTCAGGAAGCCCTTGATTATGGGCTTATTGACCGTATAGTTAGGCCACCACGGATTAAGGCCGATGCACCCCGT
AAGGATGCTGGAACAGGGCTTGGT
mRNA sequenceShow/hide mRNA sequence
AAATGCAGGACACATAACAAGAAGGCAGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAGGGTGCCTTACAGAACTCCTGGTGAGGGAACTTGGCAATGGGT
TGATTTGTGGAATGCCCTATATCGAGAACGGGTTATCTTCATTGGGCAAAACATCGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATGCTATATCTTGACAGCATTG
AGACGTCCAAGAAACTCTATATGTACATAAATGGCCCTGGTGGAGATCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGAAGAGCCCTGTAGCAACCCAT
TGTGTGGGCTATGCCTATAATCTTGCAGCCTTTCTACTTGCAGCTGGAGAAAAGGGTAACCGCTTTGCGATGCCTCTATCAAGAATTGCTTTGCAATCCCCAGCTGGAGC
TGCTCGTGGTCAGGCTGACGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTTTGATGAGCTTTCCAAGAAAACAGGCCAGCCTGTTGAAAAGA
TTAACAAGGACTTGAGTCGAATGAAGCGCTTTAATGCTCAGGAAGCCCTTGATTATGGGCTTATTGACCGTATAGTTAGGCCACCACGGATTAAGGCCGATGCACCCCGT
AAGGATGCTGGAACAGGGCTTGGT
Protein sequenceShow/hide protein sequence
KCRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATH
CVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPR
KDAGTGLG