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MS017895 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017895
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein cornichon homolog 4
Genome locationscaffold373:3600652..3601587
RNA-Seq ExpressionMS017895
SyntenyMS017895
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158397.1 protein cornichon homolog 4 [Momordica charantia]4.7e-5198.1Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

XP_022922295.1 protein cornichon homolog 4-like [Cucurbita moschata]2.9e-4891.43Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLLTGHWIMSLFC PYLYYN+RLYTQR+HLVDVTEIFNQL WEKK+RLFKLVYLVSL+F
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

XP_022957749.1 protein cornichon homolog 4-like [Cucurbita moschata]2.2e-4891.43Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLLTGHWIMS FC PYLYYNLRLYTQR+HLVDVTEIFNQL WEKK+RLFKLVYL+SLLF
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

XP_022969840.1 protein cornichon homolog 4-like [Cucurbita maxima]3.7e-4891.43Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLC FYLLTGHWIMSLFC PYLYYN+RLYTQR+HLVDVTEIFNQL WEKK+RLFKLVYLVSL+F
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

XP_023532889.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]3.7e-4891.43Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLLTGHWIMS FC PYLYYNLRLYTQR+HLVDVTEIFNQL WEKK+RLFKLVYL+SLLF
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

TrEMBL top hitse value%identityAlignment
A0A6J1DX47 protein cornichon homolog 42.3e-5198.1Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

A0A6J1E8A9 protein cornichon homolog 4-like1.4e-4891.43Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLLTGHWIMSLFC PYLYYN+RLYTQR+HLVDVTEIFNQL WEKK+RLFKLVYLVSL+F
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

A0A6J1H2W0 protein cornichon homolog 4-like1.1e-4891.43Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLLTGHWIMS FC PYLYYNLRLYTQR+HLVDVTEIFNQL WEKK+RLFKLVYL+SLLF
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

A0A6J1I130 protein cornichon homolog 4-like1.8e-4891.43Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLC FYLLTGHWIMSLFC PYLYYN+RLYTQR+HLVDVTEIFNQL WEKK+RLFKLVYLVSL+F
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

A0A6J1K131 protein cornichon homolog 4-like2.4e-4891.43Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLLTGHWIMS FC PYLYYNLRLYTQR+HLVDVTEIFNQL WEKK+RLFKLVYL+SLLF
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        LSIFW
Subjt:  LSIFW

SwissProt top hitse value%identityAlignment
Q3EDD7 Probable protein cornichon homolog 22.2e-4378.1Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        +  L+CLADLEFDYINPYDS+SRIN VVLPEFI QGVLC+FYLLTGHW M+L C PYLYYN  LY++RQHLVDVTEIFN L WEKKKRLFKL Y+V  LF
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        L+IFW
Subjt:  LSIFW

Q84W04 Protein cornichon homolog 47.6e-4480.58Show/hide
Query:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS
        QL+CLADLEFDYINPYDS+SRIN VVLPEFI QGVLC+FYLLTGHW M+L C PYLYYN  LY++RQHLVDVTEIFN L WEKKKRLFKL Y+V  LFL+
Subjt:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS

Query:  IFW
        IFW
Subjt:  IFW

Q8GWT5 Protein cornichon homolog 35.1e-4073.79Show/hide
Query:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS
        QL+ LADLEFDYINPYDS+SRIN VVLPE I QG LC+FYL+TGHW M+L C PYLYYN  LY+++QHL+DVTEIFN L WEKKKRLFKL Y++  LFL+
Subjt:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS

Query:  IFW
        IFW
Subjt:  IFW

Q9C7D7 Protein cornichon homolog 14.3e-2348.04Show/hide
Query:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS
        Q++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ +LLT HW+  L   P   Y+  LY +R++L+DVTE+F  +++EKK R  KL + V L  + 
Subjt:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS

Query:  IF
        +F
Subjt:  IF

Q9SZ74 Protein cornichon homolog 58.7e-3256.19Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QL CLADLEFD INPYD SSRIN++VLPEF  QG+LC++Y+LTGHW M++   P+L+YN+RLY +R+HL DVTE++N   WE+KKR++K+ ++   +F
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        ++ +W
Subjt:  LSIFW

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein1.6e-4478.1Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        +  L+CLADLEFDYINPYDS+SRIN VVLPEFI QGVLC+FYLLTGHW M+L C PYLYYN  LY++RQHLVDVTEIFN L WEKKKRLFKL Y+V  LF
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        L+IFW
Subjt:  LSIFW

AT1G12390.1 Cornichon family protein5.4e-4580.58Show/hide
Query:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS
        QL+CLADLEFDYINPYDS+SRIN VVLPEFI QGVLC+FYLLTGHW M+L C PYLYYN  LY++RQHLVDVTEIFN L WEKKKRLFKL Y+V  LFL+
Subjt:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS

Query:  IFW
        IFW
Subjt:  IFW

AT1G62880.1 Cornichon family protein3.6e-4173.79Show/hide
Query:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS
        QL+ LADLEFDYINPYDS+SRIN VVLPE I QG LC+FYL+TGHW M+L C PYLYYN  LY+++QHL+DVTEIFN L WEKKKRLFKL Y++  LFL+
Subjt:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS

Query:  IFW
        IFW
Subjt:  IFW

AT3G12180.1 Cornichon family protein3.1e-2448.04Show/hide
Query:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS
        Q++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ +LLT HW+  L   P   Y+  LY +R++L+DVTE+F  +++EKK R  KL + V L  + 
Subjt:  QLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLS

Query:  IF
        +F
Subjt:  IF

AT4G12090.1 Cornichon family protein6.2e-3356.19Show/hide
Query:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF
        + QL CLADLEFD INPYD SSRIN++VLPEF  QG+LC++Y+LTGHW M++   P+L+YN+RLY +R+HL DVTE++N   WE+KKR++K+ ++   +F
Subjt:  LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLF

Query:  LSIFW
        ++ +W
Subjt:  LSIFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTTGCAGCTCATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCTTCGTCACGGATAAACAAAGTGGTTTTACCTGAGTTCATCACCCAAGGAGT
CTTGTGCATCTTCTATCTTTTGACAGGGCATTGGATTATGTCATTATTTTGTGCGCCTTACCTCTATTACAATTTGAGATTGTACACTCAGCGACAGCACCTGGTAGATG
TTACCGAGATATTCAATCAGTTAACTTGGGAAAAGAAGAAAAGGCTTTTCAAACTAGTCTATCTTGTTTCTCTCCTCTTTCTTTCCATATTTTGG
mRNA sequenceShow/hide mRNA sequence
TTGTTGCAGCTCATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCTTCGTCACGGATAAACAAAGTGGTTTTACCTGAGTTCATCACCCAAGGAGT
CTTGTGCATCTTCTATCTTTTGACAGGGCATTGGATTATGTCATTATTTTGTGCGCCTTACCTCTATTACAATTTGAGATTGTACACTCAGCGACAGCACCTGGTAGATG
TTACCGAGATATTCAATCAGTTAACTTGGGAAAAGAAGAAAAGGCTTTTCAAACTAGTCTATCTTGTTTCTCTCCTCTTTCTTTCCATATTTTGG
Protein sequenceShow/hide protein sequence
LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLSIFW