; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017913 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017913
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationscaffold373:3775896..3781817
RNA-Seq ExpressionMS017913
SyntenyMS017913
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]5.6e-19889Show/hide
Query:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS KDK   ++S S  EQ  VGKEGIEWIMNLPDVPMKLPPH+EL RTRVE KADAPIHTDTIQY GAYAS+G+DNSL+LD FR NFKIEVIDL EDD+E
Subjt:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQ  LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        ELK+KCPV+VFDIEDIANGKKRATVARPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

KAG7028290.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-19888.97Show/hide
Query:  MSAKDKRSRDISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
        MS K K   ++S S  EQ VGKEGIEWIMNLPDVPMKLPPH+EL RTRVE KADAPIHTDTIQY GAYAS+G+DNSL+LD FR NFKIEVIDL EDD+EF
Subjt:  MSAKDKRSRDISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF

Query:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
        DMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSKALTWLPN
Subjt:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN

Query:  GSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
        GSEFPLVSDKSV N+KPKTYTSFSCSQ  LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAEE
Subjt:  GSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE

Query:  LKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        LK+KCPV+VFDIEDIANGKKRATVARPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  LKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

XP_022158557.1 DNA-directed RNA polymerases I and III subunit RPAC1-like isoform X1 [Momordica charantia]4.0e-20493.68Show/hide
Query:  ISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
        +S S+ EQ  GKEGIEWIMNLPDVPMKLPPHLE+ RTRVE KADAPIHTDTIQY GAYASMGVDNSL+LDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
Subjt:  ISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA

Query:  NAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDK
        NAFRRILIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSK LTWLPNGSEFPLVSDK
Subjt:  NAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDK

Query:  SVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVF
        SVPNSKPKTYTSFSCSQ  LPEFS N IGPKD+DIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELK KCPVDVF
Subjt:  SVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVF

Query:  DIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        DIEDIANGKKRA VARPRSCTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  DIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

XP_022158862.1 LOW QUALITY PROTEIN: DNA-directed RNA polymerases I and III subunit RPAC1-like [Momordica charantia]4.8e-21897.69Show/hide
Query:  MSAKDKRSRDISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
        MSAKDKRSRDI GSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVE KADAPIHTDTIQY GAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
Subjt:  MSAKDKRSRDISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF

Query:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
        DMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
Subjt:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN

Query:  GSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
        GSEFPLVSDKSVPNSKPKTYTSFSCSQ ALPEFSKNPIGPKDSDIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
Subjt:  GSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE

Query:  LKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        LKSKCPVDVFDIEDIANGKKRATV RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
Subjt:  LKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]1.7e-19990.54Show/hide
Query:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS KDK   ++S S+ EQ  V KEGIEWIMNLPDVPMKLPPHLEL RTRVE KADAPIHTDTIQY GA+ASMGVDNSL+LDYFRNNFKIEVIDL EDDIE
Subjt:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PIHVDPRLFEYSDKDTPNEKNTIVFRLHA CERGK RLTVTSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQ  LPEFS NPIGPKDSDII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI+DELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        ELK KCPV+VFDIEDIA GKKRATVARPR+CTLCRECIRG+ WEKRV+LRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC15.8e-19388.01Show/hide
Query:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS KDK   ++S S+ EQ  V KEGIEWIMNLPDVPMKLPPH+EL RTRVE KADAPIHTDTIQY GA+ASMG DNSL+LD FRNNFKIEVIDL EDDIE
Subjt:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDPALANAFRRILI+EVPTMAIEKVL ANNTSI+QDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLHA CERGKPRLTVTSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVAL-PEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        NGSEFPLVSDKSV NSKPKTYTSFSCSQ  L  EFS NPIGPKDSDII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+EEIEDELA
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVAL-PEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        EEL+ KCPV+VFDIEDIA GKKRATVARPR CTLCRECIRG+AWEKRV+LRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  EELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC11.9e-20493.68Show/hide
Query:  ISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
        +S S+ EQ  GKEGIEWIMNLPDVPMKLPPHLE+ RTRVE KADAPIHTDTIQY GAYASMGVDNSL+LDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
Subjt:  ISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA

Query:  NAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDK
        NAFRRILIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSK LTWLPNGSEFPLVSDK
Subjt:  NAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDK

Query:  SVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVF
        SVPNSKPKTYTSFSCSQ  LPEFS N IGPKD+DIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELK KCPVDVF
Subjt:  SVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVF

Query:  DIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        DIEDIANGKKRA VARPRSCTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  DIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC12.3e-21897.69Show/hide
Query:  MSAKDKRSRDISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
        MSAKDKRSRDI GSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVE KADAPIHTDTIQY GAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
Subjt:  MSAKDKRSRDISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF

Query:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
        DMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
Subjt:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN

Query:  GSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
        GSEFPLVSDKSVPNSKPKTYTSFSCSQ ALPEFSKNPIGPKDSDIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
Subjt:  GSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE

Query:  LKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        LKSKCPVDVFDIEDIANGKKRATV RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
Subjt:  LKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC12.7e-19889Show/hide
Query:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS KDK   ++S S  EQ  VGKEGIEWIMNLPDVPMKLPPH+EL RTRVE KADAPIHTDTIQY GAYAS+G+DNSL+LD FR NFKIEVIDL EDD+E
Subjt:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQ  LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        ELK+KCPV+VFDIEDIANGKKRATVARPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC16.0e-19889Show/hide
Query:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS +DK    +S S  EQ  VGKEGIEWIMNLPDVPMKLPPH+EL RTRVE KADAPIHTDTIQY GAYAS+G+DNSL+LD FR NFKIEVIDL EDD+E
Subjt:  MSAKDKRSRDISGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TS+ALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQ  LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        ELK+KCPV+VFDIEDIANGKKRATVARPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKSKCPVDVFDIEDIANGKKRATVARPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC17.8e-7845.73Show/hide
Query:  LELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        +E  R+RV        +  T  + G Y+  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  LELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R                   V ++ +TW+P G++  L                    
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVAR
              F +  I P   DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V +++++  GKK A VA 
Subjt:  QVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVAR

Query:  PRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL
        PR  T  RE  R E  +K V L RV++H+IF +ESTG LPP+VL +EAIK+L  KC R + EL
Subjt:  PRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC14.5e-6539.33Show/hide
Query:  RTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAH
        RT +   +D      ++ + G Y     DN   LD F+ N K+ +  L ++ + F++ GID ++ANAFRRILIAE+PT+A E V + NNTSIIQDEVL+H
Subjt:  RTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAH

Query:  RLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERGK---------PRLTVTSKA----LTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        R+GL+PI  DP +F++     P ++      +T+VF L+ +CE  K          RL V S+     L W P G +                       
Subjt:  RLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERGK---------PRLTVTSKA----LTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVAR
              F+ NPI   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + +   P  V ++E+  +GKK+A VA 
Subjt:  QVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVAR

Query:  PRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKC
         R  T+ REC+R   +  +V L RV++H++F +ESTG + P+VLF ++I +L+ KC
Subjt:  PRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC18.7e-7747.47Show/hide
Query:  LELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        +E  RTRV        +  T  + G YA  G D++   + F  NF+++V+ + ED +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  LELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQVALP------EF
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL  RC R               PN ++     D S PN     +  ++     +P       F
Subjt:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQVALP------EF

Query:  SKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVARPRSCTLC
         +  I P   DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL       V ++E++  GKK A VA  R  T  
Subjt:  SKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVARPRSCTLC

Query:  RECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL
        RE  R E  +K V L RV++H+IF +ESTG LPP+VL +EAIKIL  KC R + EL
Subjt:  RECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC19.2e-7946.56Show/hide
Query:  LELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        +E  RTRV        +  T  + G Y+  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  LELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R                   V ++ +TW+P G++  L                    
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVAR
              F +  I P   DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V ++++I  GKK A VA 
Subjt:  QVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVAR

Query:  PRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL
        PR  T  RE  R E  +K V L RV++HFIF +ESTG LPP+VL +EAIK+L  KC+R + EL
Subjt:  PRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac12.4e-7142.9Show/hide
Query:  PHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQ
        P+LE  RT+V        +     Y GAY S+G DNS  L+ F+ NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt:  PHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQ

Query:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GK-PRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQVAL
        DEVLAHRLG+IPI VDPR F +     PN+    ++T++F+L  +CE+    GK    T  SK L W+P   +     ++  PN + +            
Subjt:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GK-PRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQVAL

Query:  PEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVARPRSC
                 P + DI I +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L  KCP  VFDIED      +   ARP  C
Subjt:  PEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVARPRSC

Query:  TLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKC
        T+CRECIR   +E+ V + RV++HFIF IESTGAL    +F EAIKI  +KC
Subjt:  TLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 436.7e-14168.49Show/hide
Query:  IMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
        I +LPDVP  LPPHLEL RTRV  K D+ IH   I + GAY+SMGVDNS++L+ F  +FK++VI L E D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIE

Query:  KVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        KV VANNTS+IQDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LH +C +G PR  V +  L WLPNGSE  L+ +     + PKTYTSF+ S
Subjt:  KVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVAR
        Q + PEF++NPI P   DI+IA+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL   CP  VFDIED+  G+KRATVAR
Subjt:  QVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVAR

Query:  PRSCTLCRECIR-GEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        PR C+LCRECIR G  WE +V LRRVKNHFIF IESTG+ PPEVLF EA+KILEDKCER+I+ELS
Subjt:  PRSCTLCRECIR-GEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein7.4e-13265.83Show/hide
Query:  IMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+  +TRV  K +AP HT +  Y G Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVA
        SQ +LPEF+ NPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L + CP +VFDIED+  GKKRATVA
Subjt:  SQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVA

Query:  RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERL
        +PR CTLC+EC+R +     V L  VKNHFIF IESTG+LPPEVLFTEA+KILE KCE +
Subjt:  RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein7.4e-13265.83Show/hide
Query:  IMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+  +TRV  K +AP HT +  Y G Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVA
        SQ +LPEF+ NPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L + CP +VFDIED+  GKKRATVA
Subjt:  SQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVA

Query:  RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERL
        +PR CTLC+EC+R +     V L  VKNHFIF IESTG+LPPEVLFTEA+KILE KCE +
Subjt:  RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein5.7e-9265.27Show/hide
Query:  IMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+  +TRV  K +AP HT +  Y G Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQ +LPEF+ NPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein3.0e-3232.37Show/hide
Query:  KIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA
        KI++ +L +D  +F++   D ++ANA RR++I+EVPT+AI+ V +  N+S++ DE +AHRLGLIP+  +        R  +  D D   E  ++ FRL +
Subjt:  KIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA

Query:  RCERGKPRLTVTSKAL-TWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVAT
        +C   +  L VTS+ L +  P  +      D SV +S                         +   III +L  GQE++L A A KG+GK HAKWSP AT
Subjt:  RCERGKPRLTVTSKAL-TWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVAT

Query:  AWYRMLPEVVLLEEIEDELAEELK----SKCPVDVFDIEDIANGKKRATVARPRSCTLCRECI-RGEAWEK--RVSLRRVKNHFIFKIESTGALPPEVLF
          +   P++++ E++ D L++E K       P  VF ++ +    ++  V  P + T   E I + EA  K   + +    + FIF +ESTGA+    L 
Subjt:  AWYRMLPEVVLLEEIEDELAEELK----SKCPVDVFDIEDIANGKKRATVARPRSCTLCRECI-RGEAWEK--RVSLRRVKNHFIFKIESTGALPPEVLF

Query:  TEAIKILEDKCE
          AI +L+ K +
Subjt:  TEAIKILEDKCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCTAAAGATAAGAGATCGCGTGATATATCGGGCTCAAAATTTGAACAATGTGTGGGCAAAGAAGGCATTGAATGGATAATGAATCTTCCAGACGTGCCCATGAA
GCTCCCACCGCACTTGGAATTGCATAGGACCAGAGTCGAATTCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTTTGGAGCATATGCTTCGATGGGTGTTG
ATAACAGTTTACAATTGGATTATTTTCGCAACAACTTTAAAATTGAAGTGATTGATCTAGGAGAGGATGACATTGAGTTTGACATGATTGGTATTGACCCGGCACTTGCT
AATGCGTTTCGAAGAATCCTTATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACGTCAATAATCCAAGATGAAGTGCTTGCCCATAGGTT
AGGCCTCATTCCGATTCATGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAACGTG
GAAAACCTCGTCTTACAGTGACATCAAAAGCATTGACGTGGTTACCTAATGGTAGTGAATTTCCTTTGGTATCGGACAAATCAGTTCCAAACTCAAAACCCAAAACCTAT
ACTTCTTTTAGTTGCAGCCAAGTTGCGCTACCAGAATTTTCCAAAAATCCAATTGGACCGAAGGACAGTGATATTATAATTGCTAGACTTGGCCCGGGTCAGGAAATTGA
ACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTATAGGATGCTTCCAGAGGTTGTACTTTTGGAGGAGATAG
AGGATGAGTTGGCTGAAGAACTCAAAAGTAAATGTCCTGTTGATGTATTTGACATTGAAGACATTGCTAATGGTAAGAAAAGGGCAACTGTAGCACGCCCACGATCTTGC
ACATTATGTAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTTTCATTGCGTCGTGTGAAGAATCATTTCATTTTTAAGATTGAATCAACCGGAGCTTTACCTCC
TGAGGTGCTGTTCACTGAAGCTATAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCT
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCTAAAGATAAGAGATCGCGTGATATATCGGGCTCAAAATTTGAACAATGTGTGGGCAAAGAAGGCATTGAATGGATAATGAATCTTCCAGACGTGCCCATGAA
GCTCCCACCGCACTTGGAATTGCATAGGACCAGAGTCGAATTCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTTTGGAGCATATGCTTCGATGGGTGTTG
ATAACAGTTTACAATTGGATTATTTTCGCAACAACTTTAAAATTGAAGTGATTGATCTAGGAGAGGATGACATTGAGTTTGACATGATTGGTATTGACCCGGCACTTGCT
AATGCGTTTCGAAGAATCCTTATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACGTCAATAATCCAAGATGAAGTGCTTGCCCATAGGTT
AGGCCTCATTCCGATTCATGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAACGTG
GAAAACCTCGTCTTACAGTGACATCAAAAGCATTGACGTGGTTACCTAATGGTAGTGAATTTCCTTTGGTATCGGACAAATCAGTTCCAAACTCAAAACCCAAAACCTAT
ACTTCTTTTAGTTGCAGCCAAGTTGCGCTACCAGAATTTTCCAAAAATCCAATTGGACCGAAGGACAGTGATATTATAATTGCTAGACTTGGCCCGGGTCAGGAAATTGA
ACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTATAGGATGCTTCCAGAGGTTGTACTTTTGGAGGAGATAG
AGGATGAGTTGGCTGAAGAACTCAAAAGTAAATGTCCTGTTGATGTATTTGACATTGAAGACATTGCTAATGGTAAGAAAAGGGCAACTGTAGCACGCCCACGATCTTGC
ACATTATGTAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTTTCATTGCGTCGTGTGAAGAATCATTTCATTTTTAAGATTGAATCAACCGGAGCTTTACCTCC
TGAGGTGCTGTTCACTGAAGCTATAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCT
Protein sequenceShow/hide protein sequence
MSAKDKRSRDISGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRVEFKADAPIHTDTIQYFGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
NAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTY
TSFSCSQVALPEFSKNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVARPRSC
TLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS