; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017920 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017920
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR32-like
Genome locationscaffold373:3820087..3820227
RNA-Seq ExpressionMS017920
SyntenyMS017920
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8077630.1 hypothetical protein FH972_016177 [Carpinus fangiana]5.8e-0965.38Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVGQ  EQRQRFVIP     H LF+QLL +++EE+GFNH GP  IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

KAF7816642.1 auxin-responsive protein SAUR32 [Senna tora]2.2e-0859.62Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVGQ+GE+++RFVIP     H LF+ LL  A+EE+GF+H GP  IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

KAG9133963.1 hypothetical protein Leryth_004671 [Lithospermum erythrorhizon]5.8e-0961.54Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGCVAILVGQ+GE++QRF++P     H LF+QLL +A+EE+GF H GP  IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

XP_027109983.1 auxin-responsive protein SAUR32-like [Coffea arabica]2.2e-0859.62Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVG +GE++QRF+IP     H LF+QLL +A+EE+GF+H GP  IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

XP_027159989.1 auxin-responsive protein SAUR32-like [Coffea eugenioides]2.2e-0859.62Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVG +GE++QRF+IP     H LF+QLL +A+EE+GF+H GP  IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

TrEMBL top hitse value%identityAlignment
A0A4P1QXA1 Uncharacterized protein3.1e-0863.46Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVG QGE++QRFVIP     H LF+QLL +A+EE+GF H GP +IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

A0A5N6RIC8 Uncharacterized protein2.8e-0965.38Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVGQ  EQRQRFVIP     H LF+QLL +++EE+GFNH GP  IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

A0A6A5MGW4 Putative small auxin-up RNA3.1e-0863.46Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVG QGE++QRFVIP     H LF+QLL +A+EE+GF H GP +IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

A0A6P6VLD4 auxin-responsive protein SAUR32-like1.1e-0859.62Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVG +GE++QRF+IP     H LF+QLL +A+EE+GF+H GP  IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

A0A6P6W3P2 auxin-responsive protein SAUR32-like1.1e-0859.62Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AILVG +GE++QRF+IP     H LF+QLL +A+EE+GF+H GP  IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

SwissProt top hitse value%identityAlignment
Q9ZUZ3 Auxin-responsive protein SAUR327.9e-0951.92Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AI VG QGE++QRF++P     H LF+QLL +A++E+GF+  G   IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family5.6e-1051.92Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AI VG QGE++QRF++P     H LF+QLL +A++E+GF+  G   IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

AT3G61900.1 SAUR-like auxin-responsive protein family4.7e-0951.92Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+AI VG + E++QRFV+P     H LF+QLL +A+EE+GF   G   IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

AT4G00880.1 SAUR-like auxin-responsive protein family1.5e-0753.85Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGC+A+ VG QGE+++RFVIP     H LF QLL +A+EE GF   G   IP
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP

AT4G34800.1 SAUR-like auxin-responsive protein family5.4e-0548.89Show/hide
Query:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNH
        KG VA+ VG++ E ++RFV+P     H  F  LL+ A+EE GFNH
Subjt:  KGCVAILVGQQGEQRQRFVIP-----HLLFVQLLNDAKEEHGFNH

AT5G53590.1 SAUR-like auxin-responsive protein family3.1e-0848.15Show/hide
Query:  KGCVAILVGQQGEQR--QRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP
        KGCVAI+VG + ++    RFV+P     H LF+ LL +A++E+GF H GP  IP
Subjt:  KGCVAILVGQQGEQR--QRFVIP-----HLLFVQLLNDAKEEHGFNHHGPSLIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGGGTGCGTGGCGATTCTGGTGGGTCAACAAGGCGAGCAGCGACAGAGGTTCGTCATCCCCCATCTTTTGTTCGTCCAGCTCCTCAACGACGCCAAGGAGGAGCATGG
CTTTAACCACCATGGCCCATCTCTAATCCCC
mRNA sequenceShow/hide mRNA sequence
AAGGGGTGCGTGGCGATTCTGGTGGGTCAACAAGGCGAGCAGCGACAGAGGTTCGTCATCCCCCATCTTTTGTTCGTCCAGCTCCTCAACGACGCCAAGGAGGAGCATGG
CTTTAACCACCATGGCCCATCTCTAATCCCC
Protein sequenceShow/hide protein sequence
KGCVAILVGQQGEQRQRFVIPHLLFVQLLNDAKEEHGFNHHGPSLIP