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MS017923 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017923
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationscaffold373:3823730..3823843
RNA-Seq ExpressionMS017923
SyntenyMS017923
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR014722 - Ribosomal protein L2, domain 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KVG37573.1 Ribosomal protein L2 [Cynara cardunculus var. scolymus]1.2e-0473.68Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        TT+HN +ITLGKGGQLVRAA  +AKL  K EKS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
RYR45922.1 hypothetical protein Ahy_A07g031691 isoform A [Arachis hypogaea]5.9e-0468.42Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T +HN +ITLGKGGQL RAA ++AKL  K EKS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
RZC71849.1 hypothetical protein C5167_035027 [Papaver somniferum]5.9e-0471.05Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        TT+HN +ITLGKGGQL RAA +IAKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
XP_024964635.1 uncharacterized protein LOC112504912 [Cynara cardunculus var. scolymus]1.2e-0473.68Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        TT+HN +ITLGKGGQLVRAA  +AKL  K EKS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
YP_009466290.1 ribosomal protein L2 [Genlisea aurea]7.8e-0471.05Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        TT+HN +ITLGKGGQLVRAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
TrEMBL top hitse value%identityAlignment
A0A103PUL6 Ribosomal protein L25.8e-0573.68Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        TT+HN +ITLGKGGQLVRAA  +AKL  K EKS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
A0A2I6QDG7 50S ribosomal protein L2, chloroplastic3.8e-0471.05Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        TT+HN +ITLGKGGQLVRAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
A0A2I6QDQ4 50S ribosomal protein L2, chloroplastic3.8e-0471.05Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        TT+HN +ITLGKGGQLVRAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
A0A445C4R6 Ribosomal_L2_C domain-containing protein2.9e-0468.42Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T +HN +ITLGKGGQL RAA ++AKL  K EKS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
A0A4Y7KIS3 Ribosomal_L2_C domain-containing protein2.9e-0471.05Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        TT+HN +ITLGKGGQL RAA +IAKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
SwissProt top hitse value%identityAlignment
B0Z4R7 50S ribosomal protein L2, chloroplastic6.6e-0668.42Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T LHN +ITLGKGGQL RAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
B0Z501 50S ribosomal protein L2, chloroplastic6.6e-0668.42Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T LHN +ITLGKGGQL RAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
B0Z585 50S ribosomal protein L2, chloroplastic6.6e-0668.42Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T LHN +ITLGKGGQL RAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
Q06R66 50S ribosomal protein L2, chloroplastic3.9e-0668.42Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T +HN +ITLGKGGQLVRAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
Q9MDU0 50S ribosomal protein L2, chloroplastic6.6e-0668.42Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T LHN +ITLGKGGQL RAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
Arabidopsis top hitse value%identityAlignment
ATCG00830.1 ribosomal protein L21.8e-0663.16Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T +HN +ITLG+GGQL RAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
ATCG01310.1 ribosomal protein L21.8e-0663.16Show/hide
Query:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL
        T +HN +ITLG+GGQL RAA  +AKL  K  KS+TLKL
Subjt:  TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGACCCTACATAATACAAAAATCACTCTTGGAAAAGGGGGACAATTAGTTAGAGCAGCAAGTATTATAGCAAAATTAACGGAAAAAGGGGAGAAATCAAGCACATTAAA
ATTA
mRNA sequenceShow/hide mRNA sequence
ACGACCCTACATAATACAAAAATCACTCTTGGAAAAGGGGGACAATTAGTTAGAGCAGCAAGTATTATAGCAAAATTAACGGAAAAAGGGGAGAAATCAAGCACATTAAA
ATTA
Protein sequenceShow/hide protein sequence
TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL