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MS017943 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017943
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold373:4007464..4007799
RNA-Seq ExpressionMS017943
SyntenyMS017943
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649006.1 hypothetical protein Csa_008454 [Cucumis sativus]7.3e-1034.51Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHL-VVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEM
        +  P L+++ F NV+P VKS  EF  I ++ + +V  +E  +R   +    +LL VFH A SFTLP   T  +    +    CF N+KHL+ +TK T  +
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHL-VVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEM

Query:  IEVPIGPNTISNF
        +E  +    + NF
Subjt:  IEVPIGPNTISNF

XP_004141639.1 F-box/LRR-repeat protein At3g26922 [Cucumis sativus]7.3e-1034.51Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHL-VVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEM
        +  P L+++ F NV+P VKS  EF  I ++ + +V  +E  +R   +    +LL VFH A SFTLP   T  +    +    CF N+KHL+ +TK T  +
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHL-VVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEM

Query:  IEVPIGPNTISNF
        +E  +    + NF
Subjt:  IEVPIGPNTISNF

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]4.0e-0838.78Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRH----YEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK
        +  P LK+V F NV+P ++S SEF CI ++ + ++      +    Q+++     LL V HNA+SFTLP   TQV+     LS   F N++HL+ KTK
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRH----YEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]5.6e-3460.87Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVV-RHY--EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTK
        +C PNL+SV+F NV+PC+KSASEF+C+H++++ V  +Y    RN+QK++EN+S+LLRVFHNATSFTLP N  QV+FK+PSL+G  F NL+HL+F+T W+K
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVV-RHY--EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTK

Query:  EMIEVPIGPNTISNF
        EMIE P+  NT SNF
Subjt:  EMIEVPIGPNTISNF

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]2.1e-0941.18Show/hide
Query:  PNLKSVQFYNVVPCVKSASEFLCIHEIHLVVR----HYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEM
        P L++V F NV+P VKS SEF CIH++ + ++           QK++ N  +LL VFHNA SFTLP   T V+     L    F N+ HL+ KTK +  +
Subjt:  PNLKSVQFYNVVPCVKSASEFLCIHEIHLVVR----HYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEM

Query:  IE
        +E
Subjt:  IE

TrEMBL top hitse value%identityAlignment
A0A061FRY8 F-box/RNI-like superfamily protein1.3e-0433.33Show/hide
Query:  APNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRHYEPRNRQKMEENISKLLRV---FHNATSFTLPSNTTQVLFKAPSLSG---FCFPNLKHLKFKT-KW
        AP L + ++  + P V        + +++  ++   P  ++  EE++ +L++    F +A S TL S+T QVL K PSL G   F F NLKHLK K  KW
Subjt:  APNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRHYEPRNRQKMEENISKLLRV---FHNATSFTLPSNTTQVLFKAPSLSG---FCFPNLKHLKFKT-KW

Query:  TKEMIEVP
          +   +P
Subjt:  TKEMIEVP

A0A061FSL5 F-box/RNI-like superfamily protein4.5e-0530.56Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRHYE-PRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSL---SGFCFPNLKHLKFKT-KW
        +CAP L + ++  + P V S      + +++  ++ Y   RN ++    +    + F  A S TL ++T ++L K PSL   +   F NLKHLK K  KW
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRHYE-PRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSL---SGFCFPNLKHLKFKT-KW

Query:  TKEMIEVP
          +  E+P
Subjt:  TKEMIEVP

A0A0A0KSW6 F-box domain-containing protein3.6e-1034.51Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHL-VVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEM
        +  P L+++ F NV+P VKS  EF  I ++ + +V  +E  +R   +    +LL VFH A SFTLP   T  +    +    CF N+KHL+ +TK T  +
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHL-VVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEM

Query:  IEVPIGPNTISNF
        +E  +    + NF
Subjt:  IEVPIGPNTISNF

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.9e-0838.78Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRH----YEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK
        +  P LK+V F NV+P ++S SEF CI ++ + ++      +    Q+++     LL V HNA+SFTLP   TQV+     LS   F N++HL+ KTK
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRH----YEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK

A0A5A7TCF1 F-box/LRR-repeat protein2.9e-0439.74Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRH----YEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQ-VLF
        +  P LK+V F NV+P ++S SEF CI ++ + ++      +    Q+++     LL V HNA+SFTLP   TQ VLF
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRH----YEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQ-VLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCCCCAAATCTCAAAAGTGTCCAGTTTTACAATGTTGTGCCTTGTGTAAAATCTGCTTCTGAGTTTCTGTGCATACACGAAATACATCTAGTAGTTCGTCATTA
TGAACCCAGAAACCGGCAAAAGATGGAGGAAAATATCTCTAAATTGCTTAGAGTTTTTCATAATGCAACTTCTTTTACGCTGCCTTCCAATACAACACAGGTTCTGTTTA
AAGCTCCTTCTTTAAGCGGGTTTTGTTTTCCTAATTTGAAACATTTGAAGTTCAAAACAAAGTGGACCAAGGAGATGATAGAGGTGCCGATTGGTCCAAACACAATCTCC
AATTTC
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCCCCAAATCTCAAAAGTGTCCAGTTTTACAATGTTGTGCCTTGTGTAAAATCTGCTTCTGAGTTTCTGTGCATACACGAAATACATCTAGTAGTTCGTCATTA
TGAACCCAGAAACCGGCAAAAGATGGAGGAAAATATCTCTAAATTGCTTAGAGTTTTTCATAATGCAACTTCTTTTACGCTGCCTTCCAATACAACACAGGTTCTGTTTA
AAGCTCCTTCTTTAAGCGGGTTTTGTTTTCCTAATTTGAAACATTTGAAGTTCAAAACAAAGTGGACCAAGGAGATGATAGAGGTGCCGATTGGTCCAAACACAATCTCC
AATTTC
Protein sequenceShow/hide protein sequence
MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHLVVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTKWTKEMIEVPIGPNTIS
NF