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MS017953 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017953
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChloride channel protein
Genome locationscaffold373:4096982..4097116
RNA-Seq ExpressionMS017953
SyntenyMS017953
Gene Ontology termsGO:0006821 - chloride transport (biological process)
GO:0015706 - nitrate transport (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0009705 - plant-type vacuole membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005247 - voltage-gated chloride channel activity (molecular function)
GO:0009671 - nitrate:proton symporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578371.1 Chloride channel protein CLC-b, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
KAG7015953.1 Chloride channel protein CLC-b [Cucurbita argyrosperma subsp. argyrosperma]2.2e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
XP_022133662.1 chloride channel protein CLC-a [Momordica charantia]2.2e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
XP_022992593.1 chloride channel protein CLC-b-like [Cucurbita maxima]2.2e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
XP_023550242.1 chloride channel protein CLC-b-like [Cucurbita pepo subsp. pepo]2.2e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
TrEMBL top hitse value%identityAlignment
A0A1S3B373 Chloride channel protein1.1e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
A0A5D3DLW5 Chloride channel protein1.1e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
A0A6J1BXB9 Chloride channel protein1.1e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
A0A6J1FG30 chloride channel protein CLC-b-like1.1e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
A0A6J1JZP1 chloride channel protein CLC-b-like1.1e-1391.11Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVMESMSVAKALVLF+QVGL HLLI+PKYEAAG
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
SwissProt top hitse value%identityAlignment
P60300 Putative chloride channel-like protein CLC-g4.4e-0962.5Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
        +DLHP +N +PYTV+E+MS+AKAL+LF++VG+ HLL++PK
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
P92941 Chloride channel protein CLC-a3.9e-1375.56Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTV++SMSVAKALVLF+ VGL HLL++PK +A+G
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
P92942 Chloride channel protein CLC-b2.7e-1482.22Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVME+MSVAKALVLF+QVGL HLLI+PK +A+G
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
P92943 Chloride channel protein CLC-d7.3e-0450Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
        IDL P  N +PY V E MS+ K   LF+Q+GL HL ++P+
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
Q96282 Chloride channel protein CLC-c3.4e-0962.5Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
        +DLHP+TNT+PYTV+E++S+AKA +LF+Q+GL HL ++PK
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
Arabidopsis top hitse value%identityAlignment
AT3G27170.1 chloride channel B1.9e-1582.22Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTVME+MSVAKALVLF+QVGL HLLI+PK +A+G
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
AT5G33280.1 Voltage-gated chloride channel family protein3.1e-1062.5Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
        +DLHP +N +PYTV+E+MS+AKAL+LF++VG+ HLL++PK
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
AT5G40890.1 chloride channel A2.7e-1475.56Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTV++SMSVAKALVLF+ VGL HLL++PK +A+G
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
AT5G40890.2 chloride channel A2.7e-1475.56Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
        +DLHPLTNTTPYTV++SMSVAKALVLF+ VGL HLL++PK +A+G
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG
AT5G49890.1 chloride channel C2.4e-1062.5Show/hide
Query:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK
        +DLHP+TNT+PYTV+E++S+AKA +LF+Q+GL HL ++PK
Subjt:  IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCGATCTTCATCCTCTCACTAACACTACGCCTTACACAGTGATGGAGAGCATGTCGGTGGCCAAAGCTCTAGTTTTGTTCAAGCAAGTGGGCCTCCTCCATTTGCTCAT
TTTGCCTAAATATGAAGCAGCTGGG
mRNA sequenceShow/hide mRNA sequence
ATCGATCTTCATCCTCTCACTAACACTACGCCTTACACAGTGATGGAGAGCATGTCGGTGGCCAAAGCTCTAGTTTTGTTCAAGCAAGTGGGCCTCCTCCATTTGCTCAT
TTTGCCTAAATATGAAGCAGCTGGG
Protein sequenceShow/hide protein sequence
IDLHPLTNTTPYTVMESMSVAKALVLFKQVGLLHLLILPKYEAAG