; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017964 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017964
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPLAT domain-containing protein
Genome locationscaffold373:4193145..4193621
RNA-Seq ExpressionMS017964
SyntenyMS017964
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001024 - PLAT/LH2 domain
IPR010417 - Embryo-specific ATS3
IPR036392 - PLAT/LH2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042612.1 Lipoxygenase, LH2 [Cucumis melo var. makuwa]3.5e-7479.25Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        +KCVYT YV+TGSILKGGTDSKIS+ LGDS GQ V ISDLESWGLM  GHDYFERD++D+FSGRG C+++PVCRLNLTSDGSG HHGWYCDYVEVTS GP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HRACSQTAFYVDQWLATD PPFQLTT LDGC+DW+ GHGPS+HMN  +LVVS S+K+ +
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

XP_004145970.2 PLAT domain-containing protein 3 [Cucumis sativus]1.6e-7479.87Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        +KCVYT YV+TGSILKGGTDSKIS+TLGDS GQ V ISDLESWGLM  GHDYFERD++D+FSGRG C+++PVCRLNLTSDGSG HHGW+CDYVEVTS GP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HRACSQTAFYVDQWLATD PPFQLTTILDGC+DW+ GHG S+HM+S +L+VSSSKK+ +
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

XP_008437507.1 PREDICTED: uncharacterized protein LOC103482902 [Cucumis melo]1.6e-7479.87Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        +KCVYT YV+TGSILKGGTDSKIS+ LGDS GQ V ISDLESWGLM  GHDYFERD++D+FSGRG C+++PVCRLNLTSDGSG HHGWYCDYVEVTS GP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HRACSQTAFYVDQWLATD PPFQLTT LDGC+DW+ GHGPS+HMN  RLVVS S+K+ +
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

XP_022159540.1 PLAT domain-containing protein 3-like [Momordica charantia]6.0e-9099.37Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQ VSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

XP_022957900.1 PLAT domain-containing protein 3-like [Cucurbita moschata]1.2e-7176.1Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        +KCVYTFYV+TGS+LKGGTD+ IS+T+ D+ GQ V I+DLESWGLM   HDYFERD+VD+FSGRG CI+AP+CRLNLTSDGSG HHGW+CDY+EVTSTGP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HR+CSQTAFYVDQWLATD PPFQLTTILDGC+DW++GHG S+H +S +LVVS SK +AS
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

TrEMBL top hitse value%identityAlignment
A0A0A0KNI5 PLAT domain-containing protein7.6e-7579.87Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        +KCVYT YV+TGSILKGGTDSKIS+TLGDS GQ V ISDLESWGLM  GHDYFERD++D+FSGRG C+++PVCRLNLTSDGSG HHGW+CDYVEVTS GP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HRACSQTAFYVDQWLATD PPFQLTTILDGC+DW+ GHG S+HM+S +L+VSSSKK+ +
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

A0A1S3AUB5 uncharacterized protein LOC1034829027.6e-7579.87Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        +KCVYT YV+TGSILKGGTDSKIS+ LGDS GQ V ISDLESWGLM  GHDYFERD++D+FSGRG C+++PVCRLNLTSDGSG HHGWYCDYVEVTS GP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HRACSQTAFYVDQWLATD PPFQLTT LDGC+DW+ GHGPS+HMN  RLVVS S+K+ +
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

A0A5A7TGT6 Lipoxygenase, LH21.7e-7479.25Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        +KCVYT YV+TGSILKGGTDSKIS+ LGDS GQ V ISDLESWGLM  GHDYFERD++D+FSGRG C+++PVCRLNLTSDGSG HHGWYCDYVEVTS GP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HRACSQTAFYVDQWLATD PPFQLTT LDGC+DW+ GHGPS+HMN  +LVVS S+K+ +
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

A0A6J1DZ35 PLAT domain-containing protein 3-like2.9e-9099.37Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQ VSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

A0A6J1H1X8 PLAT domain-containing protein 3-like6.1e-7276.1Show/hide
Query:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP
        +KCVYTFYV+TGS+LKGGTD+ IS+T+ D+ GQ V I+DLESWGLM   HDYFERD+VD+FSGRG CI+AP+CRLNLTSDGSG HHGW+CDY+EVTSTGP
Subjt:  DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGP

Query:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS
        HR+CSQTAFYVDQWLATD PPFQLTTILDGC+DW++GHG S+H +S +LVVS SK +AS
Subjt:  HRACSQTAFYVDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS

SwissProt top hitse value%identityAlignment
O65660 PLAT domain-containing protein 13.7e-4256.15Show/hide
Query:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPH
        CVYTFY+RTGSI K GTDS IS  + D  G  + I +L++W GLMGP ++YFER ++D+FSGR  C+ +P+C LNLTSDGSG HHGWY +YVE+T+ G H
Subjt:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPH

Query:  RACSQTAFYVDQWLATDVPPFQLTTILDGC
          CS   F ++QWLATD  P++LT + + C
Subjt:  RACSQTAFYVDQWLATDVPPFQLTTILDGC

Q2V2V3 PLAT domain-containing protein 35.3e-3362.5Show/hide
Query:  ISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVT-STGPHRACSQTAFYVDQWLATDVP
        +S+ L DS+GQ   ISDL SW GLMGP HDYFER ++D+FSG G+C+  PVC +NLTSDGSG HHGWYC+YVEVT S    R+CSQ  F V+QWLA D  
Subjt:  ISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVT-STGPHRACSQTAFYVDQWLATDVP

Query:  PFQL
        P++L
Subjt:  PFQL

Q681K2 Embryo-specific protein ATS3A5.2e-0429.06Show/hide
Query:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPHR
        C YT  ++T       T  KISI+ GD +G  V +  L+      P    FE+ S D +   G C+   VC L L   GS    GW  + V++  +    
Subjt:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPHR

Query:  ACSQTAFYVDQWLATDV
        +     FY + +L   V
Subjt:  ACSQTAFYVDQWLATDV

Q9SIE7 PLAT domain-containing protein 26.3e-4255.38Show/hide
Query:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPH
        CVYTF++RTGS  K GTDS IS  + D +G  + I +LE+W GLMGPG++Y+ER ++D+FSG+  C+ +PVC LNLTSDGSG HHGWY +YVEVT+ G H
Subjt:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPH

Query:  RACSQTAFYVDQWLATDVPPFQLTTILDGC
          CS  +F V+QWLA+D  P++L+ + + C
Subjt:  RACSQTAFYVDQWLATDVPPFQLTTILDGC

Arabidopsis top hitse value%identityAlignment
AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein4.5e-4355.38Show/hide
Query:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPH
        CVYTF++RTGS  K GTDS IS  + D +G  + I +LE+W GLMGPG++Y+ER ++D+FSG+  C+ +PVC LNLTSDGSG HHGWY +YVEVT+ G H
Subjt:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPH

Query:  RACSQTAFYVDQWLATDVPPFQLTTILDGC
          CS  +F V+QWLA+D  P++L+ + + C
Subjt:  RACSQTAFYVDQWLATDVPPFQLTTILDGC

AT2G41475.1 Embryo-specific protein 3, (ATS3)3.7e-0529.06Show/hide
Query:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPHR
        C YT  ++T       T  KISI+ GD +G  V +  L+      P    FE+ S D +   G C+   VC L L   GS    GW  + V++  +    
Subjt:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPHR

Query:  ACSQTAFYVDQWLATDV
        +     FY + +L   V
Subjt:  ACSQTAFYVDQWLATDV

AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein2.6e-4356.15Show/hide
Query:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPH
        CVYTFY+RTGSI K GTDS IS  + D  G  + I +L++W GLMGP ++YFER ++D+FSGR  C+ +P+C LNLTSDGSG HHGWY +YVE+T+ G H
Subjt:  CVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPH

Query:  RACSQTAFYVDQWLATDVPPFQLTTILDGC
          CS   F ++QWLATD  P++LT + + C
Subjt:  RACSQTAFYVDQWLATDVPPFQLTTILDGC

AT5G65158.1 Lipase/lipooxygenase, PLAT/LH2 family protein3.8e-3462.5Show/hide
Query:  ISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVT-STGPHRACSQTAFYVDQWLATDVP
        +S+ L DS+GQ   ISDL SW GLMGP HDYFER ++D+FSG G+C+  PVC +NLTSDGSG HHGWYC+YVEVT S    R+CSQ  F V+QWLA D  
Subjt:  ISITLGDSFGQLVSISDLESW-GLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVT-STGPHRACSQTAFYVDQWLATDVP

Query:  PFQL
        P++L
Subjt:  PFQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACAAATGCGTGTACACCTTCTATGTGAGGACAGGTTCAATACTGAAGGGCGGGACGGACTCCAAAATCAGCATCACCCTCGGCGATTCATTCGGCCAATTGGTGTCGAT
TTCAGATCTGGAATCGTGGGGGCTGATGGGACCCGGCCACGACTATTTCGAACGTGACAGCGTCGACGTATTCAGCGGGCGAGGCGCGTGCATCGACGCGCCGGTGTGTC
GACTGAACTTGACCTCCGACGGTTCGGGCCCACACCACGGGTGGTACTGTGACTACGTGGAGGTCACGTCGACGGGGCCGCACAGAGCGTGCTCCCAGACGGCGTTTTAC
GTGGACCAGTGGCTGGCGACGGACGTGCCGCCGTTTCAGCTGACGACAATTCTGGACGGGTGCGAGGATTGGGTCCGTGGACATGGACCGTCGAAGCATATGAATAGCAG
AAGGCTGGTGGTCTCCAGTTCCAAAAAAGCTGCTTCA
mRNA sequenceShow/hide mRNA sequence
GACAAATGCGTGTACACCTTCTATGTGAGGACAGGTTCAATACTGAAGGGCGGGACGGACTCCAAAATCAGCATCACCCTCGGCGATTCATTCGGCCAATTGGTGTCGAT
TTCAGATCTGGAATCGTGGGGGCTGATGGGACCCGGCCACGACTATTTCGAACGTGACAGCGTCGACGTATTCAGCGGGCGAGGCGCGTGCATCGACGCGCCGGTGTGTC
GACTGAACTTGACCTCCGACGGTTCGGGCCCACACCACGGGTGGTACTGTGACTACGTGGAGGTCACGTCGACGGGGCCGCACAGAGCGTGCTCCCAGACGGCGTTTTAC
GTGGACCAGTGGCTGGCGACGGACGTGCCGCCGTTTCAGCTGACGACAATTCTGGACGGGTGCGAGGATTGGGTCCGTGGACATGGACCGTCGAAGCATATGAATAGCAG
AAGGCTGGTGGTCTCCAGTTCCAAAAAAGCTGCTTCA
Protein sequenceShow/hide protein sequence
DKCVYTFYVRTGSILKGGTDSKISITLGDSFGQLVSISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEVTSTGPHRACSQTAFY
VDQWLATDVPPFQLTTILDGCEDWVRGHGPSKHMNSRRLVVSSSKKAAS