; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017973 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017973
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationscaffold373:4340477..4341046
RNA-Seq ExpressionMS017973
SyntenyMS017973
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044602 - RING-H2 finger protein ATL10/ATL75-79


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017072.1 RING-H2 finger protein ATL79, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-8182.2Show/hide
Query:  MRPTPLDADDTVRFH-APPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDD-PSDGNGLSQAGQQQELRDEPKP
        MRPTPLDADDTV F   PPPPPCHD RAC+WRPYSNS+DFEANAAVVVIILLCGLIC+LALNTAIRCFLRR G  D+ PSD        +Q+ELRDE KP
Subjt:  MRPTPLDADDTVRFH-APPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDD-PSDGNGLSQAGQQQELRDEPKP

Query:  ILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN
         L+D LKMAPALVFSAE+KPKLAGAEAECTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLILHSSCPTCR SYLPPSPSS+ H GDGDG+
Subjt:  ILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN

XP_004145965.1 RING-H2 finger protein ATL79 [Cucumis sativus]7.9e-8182.35Show/hide
Query:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL
        MRPTPLDADDTVRF  PP PPCHD RAC+WRPYS+S+DFEANAAVVVIILLCGLICALALNTAIRCFLRR G  DD S  +      +Q+EL +E KP L
Subjt:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL

Query:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGD
        +D LKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSPSSS   GDG+
Subjt:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGD

XP_022159530.1 RING-H2 finger protein ATL79-like [Momordica charantia]1.0e-10499.47Show/hide
Query:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL
        MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL
Subjt:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL

Query:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN
        LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDG+
Subjt:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN

XP_022928967.1 RING-H2 finger protein ATL79-like [Cucurbita moschata]2.7e-8182.2Show/hide
Query:  MRPTPLDADDTVRFH-APPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDD-PSDGNGLSQAGQQQELRDEPKP
        MRPTPLDADDTV F   PPPPPCHD RAC+WRPYSNS+DFEANAAVVVIILLCGLIC+LALNTAIRCFLRR G  D+ PSD        +Q+ELRDE KP
Subjt:  MRPTPLDADDTVRFH-APPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDD-PSDGNGLSQAGQQQELRDEPKP

Query:  ILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN
         L+D LKMAPALVFSAE+KPKLAGAEAECTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLILHSSCPTCR SYLPPSPSS+ H GDGDG+
Subjt:  ILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN

XP_038875287.1 RING-H2 finger protein ATL79-like [Benincasa hispida]1.2e-8182.63Show/hide
Query:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRR-DDPSDGNGLSQAGQQQELRDEPKPI
        MRPTPLDADDTV F  PP PPCHD RAC+WRPYSNS+DFEANAAVVVIILLCGLICALALNTAIRCFLRR G   DDPSD        +Q+EL+DE KP 
Subjt:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRR-DDPSDGNGLSQAGQQQELRDEPKPI

Query:  LLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN
        L+D LKMAPALVFSAE KPKLAGAEAECTICLTEF EGEEIRVL+ICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSP SS   GDGDGN
Subjt:  LLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN

TrEMBL top hitse value%identityAlignment
A0A0A0KNJ7 RING-type E3 ubiquitin transferase3.8e-8182.35Show/hide
Query:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL
        MRPTPLDADDTVRF  PP PPCHD RAC+WRPYS+S+DFEANAAVVVIILLCGLICALALNTAIRCFLRR G  DD S  +      +Q+EL +E KP L
Subjt:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL

Query:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGD
        +D LKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSPSSS   GDG+
Subjt:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGD

A0A1S3AU49 RING-type E3 ubiquitin transferase1.1e-8081.28Show/hide
Query:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL
        MRPTPLDAD+TVRF  PP PPCHD RAC+WRPYSNS+DFEANAAVVVIILLCGLICALALNTAIRCFLRR G  DD S+ +      +Q+EL++E KP L
Subjt:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL

Query:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGD
        ++ LKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSPSSS   GDG+
Subjt:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGD

A0A5D3C3S3 RING-type E3 ubiquitin transferase1.1e-8081.28Show/hide
Query:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL
        MRPTPLDAD+TVRF  PP PPCHD RAC+WRPYSNS+DFEANAAVVVIILLCGLICALALNTAIRCFLRR G  DD S+ +      +Q+EL++E KP L
Subjt:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL

Query:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGD
        ++ LKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSPSSS   GDG+
Subjt:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGD

A0A6J1DZ01 RING-type E3 ubiquitin transferase5.0e-10599.47Show/hide
Query:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL
        MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL
Subjt:  MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPIL

Query:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN
        LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDG+
Subjt:  LDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN

A0A6J1ELF7 RING-type E3 ubiquitin transferase1.3e-8182.2Show/hide
Query:  MRPTPLDADDTVRFH-APPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDD-PSDGNGLSQAGQQQELRDEPKP
        MRPTPLDADDTV F   PPPPPCHD RAC+WRPYSNS+DFEANAAVVVIILLCGLIC+LALNTAIRCFLRR G  D+ PSD        +Q+ELRDE KP
Subjt:  MRPTPLDADDTVRFH-APPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDD-PSDGNGLSQAGQQQELRDEPKP

Query:  ILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN
         L+D LKMAPALVFSAE+KPKLAGAEAECTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLILHSSCPTCR SYLPPSPSS+ H GDGDG+
Subjt:  ILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGN

SwissProt top hitse value%identityAlignment
Q6NQG7 RING-H2 finger protein ATL781.9e-2140.58Show/hide
Query:  PYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICL
        PY    +F+AN  +V+ +LLC L+C+L LN+ IRC LR       PS+       G    +R     +    LK    + +S E+   L G + EC ICL
Subjt:  PYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICL

Query:  TEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCR
        +EF   E +++L  C HGFHV+CI  WL  HSSCPTCR
Subjt:  TEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCR

Q9FGJ6 RING-H2 finger protein ATL797.8e-3145.73Show/hide
Query:  PPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPK
        P C+    C W+PYSNS DF ANA+V++I+++  LICAL+L  AIRCFLR     +D              + + +P+     T    P LV+S+++  +
Subjt:  PPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPK

Query:  LAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRS-YLPPSPSSSEH
        LAGAEAEC ICL+EF +GE I+VL  C+HGFHV+CI  WL   SSCPTCR S +   S + S H
Subjt:  LAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRS-YLPPSPSSSEH

Q9FLC6 RING-H2 finger protein ATL731.6e-2341.29Show/hide
Query:  NSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGR---RDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICL
        N    + +  +++  LLC LICAL +N+ +RC LR   R    +DP D N            +  K I    LK+ P   +S E+K K      EC ICL
Subjt:  NSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGR---RDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICL

Query:  TEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLP-PSPSSSEHSGD
         +F EGE +RVL  C HGFHV+CI TWL+ HSSCPTCR+S L   +P++    GD
Subjt:  TEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLP-PSPSSSEHSGD

Q9LZV8 RING-H2 finger protein ATL747.3e-2138.93Show/hide
Query:  YSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICLT
        Y+   +F+AN  +++  LLC LI AL LN+ +RC +R          G GLS +     + D       +  K   A   S E+K     A  EC ICL 
Subjt:  YSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICLT

Query:  EFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSE
        EF++GE +RVL  C H FH+ CI TWL+ HSSCP CR S +    + SE
Subjt:  EFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSE

Q9SG96 RING-H2 finger protein ATL721.7e-2240.28Show/hide
Query:  NSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEF
        N   F+ N  +++  LLC LICAL+LN+A+RC LR   R       +  S A            +    LK  P  ++ + +    A    EC ICL +F
Subjt:  NSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEF

Query:  SEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPS
         +GE++RVL  C HGFHV+CI TWL+  SSCPTCR+S L   PS
Subjt:  SEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPS

Arabidopsis top hitse value%identityAlignment
AT3G10910.1 RING/U-box superfamily protein1.2e-2340.28Show/hide
Query:  NSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEF
        N   F+ N  +++  LLC LICAL+LN+A+RC LR   R       +  S A            +    LK  P  ++ + +    A    EC ICL +F
Subjt:  NSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICLTEF

Query:  SEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPS
         +GE++RVL  C HGFHV+CI TWL+  SSCPTCR+S L   PS
Subjt:  SEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPS

AT4G17245.1 RING/U-box superfamily protein2.8e-2844.1Show/hide
Query:  ACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKP---ILLDTLKMAPALVFSAEMKPKLAGA
        +C W+PYS+S DF ANA +++IIL C  IC L+L+ AIRC LR                      L+  PKP   +        P LV+S  +   LAG 
Subjt:  ACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKP---ILLDTLKMAPALVFSAEMKPKLAGA

Query:  EAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWL-ILHSSCPTCRRSYLPPSPSSSEHS
        EAEC ICL+EF +G+ +RVL  CKHGFHV CIQ WL   HSSCPTCR +     P     S
Subjt:  EAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWL-ILHSSCPTCRRSYLPPSPSSSEHS

AT5G01880.1 RING/U-box superfamily protein5.2e-2238.93Show/hide
Query:  YSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICLT
        Y+   +F+AN  +++  LLC LI AL LN+ +RC +R          G GLS +     + D       +  K   A   S E+K     A  EC ICL 
Subjt:  YSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICLT

Query:  EFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSE
        EF++GE +RVL  C H FH+ CI TWL+ HSSCP CR S +    + SE
Subjt:  EFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSE

AT5G05280.1 RING/U-box superfamily protein1.1e-2441.29Show/hide
Query:  NSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGR---RDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICL
        N    + +  +++  LLC LICAL +N+ +RC LR   R    +DP D N            +  K I    LK+ P   +S E+K K      EC ICL
Subjt:  NSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGR---RDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPKLAGAEAECTICL

Query:  TEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLP-PSPSSSEHSGD
         +F EGE +RVL  C HGFHV+CI TWL+ HSSCPTCR+S L   +P++    GD
Subjt:  TEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLP-PSPSSSEHSGD

AT5G47610.1 RING/U-box superfamily protein5.5e-3245.73Show/hide
Query:  PPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPK
        P C+    C W+PYSNS DF ANA+V++I+++  LICAL+L  AIRCFLR     +D              + + +P+     T    P LV+S+++  +
Subjt:  PPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPALVFSAEMKPK

Query:  LAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRS-YLPPSPSSSEH
        LAGAEAEC ICL+EF +GE I+VL  C+HGFHV+CI  WL   SSCPTCR S +   S + S H
Subjt:  LAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRS-YLPPSPSSSEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACCAACTCCGTTAGATGCCGACGACACCGTCCGCTTCCACGCGCCGCCTCCACCGCCGTGCCACGACTTCCGCGCGTGTTCTTGGCGGCCGTACTCCAATTCCAA
GGATTTCGAAGCTAACGCCGCCGTCGTCGTCATCATTCTCCTCTGCGGCCTCATCTGCGCCCTCGCTCTCAACACCGCCATCCGCTGCTTCCTCCGCCGCGACGGCCGCC
GTGATGATCCGTCCGACGGTAATGGTCTTTCTCAAGCCGGCCAGCAGCAGGAACTTCGCGACGAGCCGAAGCCGATTTTACTGGACACATTGAAGATGGCTCCGGCGCTG
GTTTTTTCGGCGGAGATGAAGCCGAAGCTCGCCGGAGCGGAGGCGGAGTGTACGATTTGCTTGACGGAGTTCTCGGAGGGGGAAGAGATTCGAGTATTGTCGATTTGTAA
GCACGGATTTCACGTGCAGTGCATTCAAACGTGGTTAATTTTGCATTCTTCTTGTCCGACTTGCCGCCGGAGCTACCTTCCTCCCTCGCCGTCGTCCTCCGAGCACAGCG
GCGACGGCGACGGCAACCAC
mRNA sequenceShow/hide mRNA sequence
ATGCGACCAACTCCGTTAGATGCCGACGACACCGTCCGCTTCCACGCGCCGCCTCCACCGCCGTGCCACGACTTCCGCGCGTGTTCTTGGCGGCCGTACTCCAATTCCAA
GGATTTCGAAGCTAACGCCGCCGTCGTCGTCATCATTCTCCTCTGCGGCCTCATCTGCGCCCTCGCTCTCAACACCGCCATCCGCTGCTTCCTCCGCCGCGACGGCCGCC
GTGATGATCCGTCCGACGGTAATGGTCTTTCTCAAGCCGGCCAGCAGCAGGAACTTCGCGACGAGCCGAAGCCGATTTTACTGGACACATTGAAGATGGCTCCGGCGCTG
GTTTTTTCGGCGGAGATGAAGCCGAAGCTCGCCGGAGCGGAGGCGGAGTGTACGATTTGCTTGACGGAGTTCTCGGAGGGGGAAGAGATTCGAGTATTGTCGATTTGTAA
GCACGGATTTCACGTGCAGTGCATTCAAACGTGGTTAATTTTGCATTCTTCTTGTCCGACTTGCCGCCGGAGCTACCTTCCTCCCTCGCCGTCGTCCTCCGAGCACAGCG
GCGACGGCGACGGCAACCAC
Protein sequenceShow/hide protein sequence
MRPTPLDADDTVRFHAPPPPPCHDFRACSWRPYSNSKDFEANAAVVVIILLCGLICALALNTAIRCFLRRDGRRDDPSDGNGLSQAGQQQELRDEPKPILLDTLKMAPAL
VFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPSSSEHSGDGDGNH