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MS017974 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017974
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTumor necrosis factor receptor family protein
Genome locationscaffold373:4346548..4350658
RNA-Seq ExpressionMS017974
SyntenyMS017974
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035535.1 hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]7.4e-6181.17Show/hide
Query:  WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRK
        WLRG Q I +ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRK
Subjt:  WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRK

Query:  MLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        ML+L CNQVGSNKKFLL+T P+DP+ ++LKS+SE  VQR K+ K   RRRK SK
Subjt:  MLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

XP_004145885.1 uncharacterized protein LOC101211684 [Cucumis sativus]3.9e-6280.65Show/hide
Query:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR
        MW R  QRIG+ADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGVV+QHGPL+ISNAWIKAQE GV+GLNSKTHMKL+LKWMRGR
Subjt:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR

Query:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        KML L C+ VGSNKKFLL T PDDP+A++LK+SSE G QR+KR K P +RRK SK
Subjt:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

XP_022159821.1 uncharacterized protein LOC111026127 [Momordica charantia]2.4e-80100Show/hide
Query:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR
        MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR
Subjt:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR

Query:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
Subjt:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

XP_022958708.1 uncharacterized protein LOC111459852 [Cucurbita moschata]1.9e-6181.82Show/hide
Query:  WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRK
        WLRG Q I +ADGGGGSAGLVFSTF RYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRK
Subjt:  WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRK

Query:  MLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        ML+L CNQVGSNKKFLL+T PDDP+A++LKS+SE  VQR K+ K   RRRK SK
Subjt:  MLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

XP_038876162.1 uncharacterized protein LOC120068455 [Benincasa hispida]4.1e-6786.45Show/hide
Query:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR
        MWLR  QRIG+ADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL++SNAWIKAQE GV+GLNSKTHMKL+LKWMRGR
Subjt:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR

Query:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        KML L CNQVGSNKKFLL T PDDP+A+QLKSSSE GVQR+KR K P +RRK SK
Subjt:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein1.9e-6280.65Show/hide
Query:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR
        MW R  QRIG+ADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGVV+QHGPL+ISNAWIKAQE GV+GLNSKTHMKL+LKWMRGR
Subjt:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR

Query:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        KML L C+ VGSNKKFLL T PDDP+A++LK+SSE G QR+KR K P +RRK SK
Subjt:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

A0A1S3ATS9 uncharacterized protein LOC1034828885.2e-6076.77Show/hide
Query:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR
        MW R  QRIG+ DGGGG  GLVF+TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGV++QHGPL++SNAWIKAQE GV+GLNSKTHMKL+LKWMRGR
Subjt:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR

Query:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        +ML L C+ VGSNKKFLL T PDDP+A++LK+ SE G QR+KR K P +RRK SK
Subjt:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

A0A6J1E538 uncharacterized protein LOC1110261271.2e-80100Show/hide
Query:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR
        MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR
Subjt:  MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGR

Query:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
Subjt:  KMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

A0A6J1H3U5 uncharacterized protein LOC1114598529.4e-6281.82Show/hide
Query:  WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRK
        WLRG Q I +ADGGGGSAGLVFSTF RYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRK
Subjt:  WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRK

Query:  MLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        ML+L CNQVGSNKKFLL+T PDDP+A++LKS+SE  VQR K+ K   RRRK SK
Subjt:  MLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

A0A6J1K817 uncharacterized protein LOC1114914953.6e-6181.17Show/hide
Query:  WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRK
        WLRG Q I +ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRK
Subjt:  WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRK

Query:  MLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK
        ML+L CNQVGSNKKFLL+T P+DP+A++LKS+SE  VQR K+ K   RR+K SK
Subjt:  MLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein1.5e-3554.17Show/hide
Query:  ADGGGG-----SAGLVF-------STFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRG
        A GGGG      A  +F       S   RY SR+RA N+RKINPK+  QEA  ++  LY + K HGPLS+ N W++AQE GVSGLNSKTHMKL+LKWMRG
Subjt:  ADGGGG-----SAGLVF-------STFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRG

Query:  RKMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKR
        +KMLKL+CNQVGS+KKF  + LP+DP  +Q  +  E   Q  K+
Subjt:  RKMLKLLCNQVGSNKKFLLSTLPDDPQADQLKSSSELGVQREKR

AT5G49410.1 unknown protein9.8e-1938.38Show/hide
Query:  VFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST
        V     R+F+ K    ++ I     P++   + + ++ ++K HGPL+I+  W + +E G+ GL SK HMK++L+WMR R+ LKL+CN VG +K+FL +T
Subjt:  VFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST

AT5G49410.2 unknown protein9.8e-1938.38Show/hide
Query:  VFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST
        V     R+F+ K    ++ I     P++   + + ++ ++K HGPL+I+  W + +E G+ GL SK HMK++L+WMR R+ LKL+CN VG +K+FL +T
Subjt:  VFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTTCGTGGTTTCCAAAGAATTGGACATGCGGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGGTATTTCTCGAGGAAGCGGGCAGAGAA
TCTTAGGAAGATCAACCCTAAGTTGACTCCTCAGGAAGCTTCTTTAGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCACGGGCCTCTCTCCATTTCCAATGCTTGGA
TTAAAGCCCAGGAATGTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTAATGCTGAAATGGATGAGGGGAAGGAAGATGCTGAAGCTTTTGTGTAACCAAGTT
GGTTCCAACAAGAAATTTCTGCTTTCTACTCTGCCCGATGATCCTCAGGCAGATCAGTTGAAGAGTTCTTCAGAATTAGGAGTCCAGAGAGAGAAGAGAGTGAAGCCACC
AGCAAGGAGAAGAAAGCCATCTAAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTTCGTGGTTTCCAAAGAATTGGACATGCGGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGGTATTTCTCGAGGAAGCGGGCAGAGAA
TCTTAGGAAGATCAACCCTAAGTTGACTCCTCAGGAAGCTTCTTTAGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCACGGGCCTCTCTCCATTTCCAATGCTTGGA
TTAAAGCCCAGGAATGTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTAATGCTGAAATGGATGAGGGGAAGGAAGATGCTGAAGCTTTTGTGTAACCAAGTT
GGTTCCAACAAGAAATTTCTGCTTTCTACTCTGCCCGATGATCCTCAGGCAGATCAGTTGAAGAGTTCTTCAGAATTAGGAGTCCAGAGAGAGAAGAGAGTGAAGCCACC
AGCAAGGAGAAGAAAGCCATCTAAA
Protein sequenceShow/hide protein sequence
MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQV
GSNKKFLLSTLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK