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MS017989 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017989
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionremorin-like
Genome locationscaffold373:4492548..4493220
RNA-Seq ExpressionMS017989
SyntenyMS017989
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0010033 - response to organic substance (biological process)
GO:1901700 - response to oxygen-containing compound (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005516 - Remorin, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN50121.1 hypothetical protein Csa_000115 [Cucumis sativus]1.6e-4069.59Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEE-KQPLRQSEESNISRS
        D+ALARVEWEKK+ALIKAWEESEKIKAENKAYKRLSA++SWE+ +KASIEAQLMKIEEKMEKKKAEY E+MKNKIVGIHK+GEE KQPL+Q+E++  SR 
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEE-KQPLRQSEESNISRS

Query:  RRPLQNTVLRGSPRRIYYSNASVVEKLGVKKVKYRTPISDLHSSFSIW
        R+  +N VL+GS +R+ YSNASVVE L   K ++ + I  L   F +W
Subjt:  RRPLQNTVLRGSPRRIYYSNASVVEKLGVKKVKYRTPISDLHSSFSIW

XP_022159795.1 remorin-like isoform X1 [Momordica charantia]4.5e-3593.48Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEK+   ++E
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

XP_022159796.1 remorin-like isoform X2 [Momordica charantia]4.5e-3593.48Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEK+   ++E
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

XP_038876135.1 remorin 1.4-like isoform X1 [Benincasa hispida]1.8e-3183.7Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D+ALARVEWEKK+ALIKAWEESEKIKAENKAYKRLSA++SWE+ KKASIEAQLMKIEEKMEKKKAEY E+MKNKIVGIHK+GEEK+   ++E
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

XP_038876138.1 remorin 1.4-like isoform X3 [Benincasa hispida]1.8e-3183.7Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D+ALARVEWEKK+ALIKAWEESEKIKAENKAYKRLSA++SWE+ KKASIEAQLMKIEEKMEKKKAEY E+MKNKIVGIHK+GEEK+   ++E
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

TrEMBL top hitse value%identityAlignment
A0A0A0KQX6 Remorin_C domain-containing protein7.7e-4169.59Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEE-KQPLRQSEESNISRS
        D+ALARVEWEKK+ALIKAWEESEKIKAENKAYKRLSA++SWE+ +KASIEAQLMKIEEKMEKKKAEY E+MKNKIVGIHK+GEE KQPL+Q+E++  SR 
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEE-KQPLRQSEESNISRS

Query:  RRPLQNTVLRGSPRRIYYSNASVVEKLGVKKVKYRTPISDLHSSFSIW
        R+  +N VL+GS +R+ YSNASVVE L   K ++ + I  L   F +W
Subjt:  RRPLQNTVLRGSPRRIYYSNASVVEKLGVKKVKYRTPISDLHSSFSIW

A0A1S3AU31 uncharacterized protein At3g61260 isoform X21.9e-3182.61Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D+ALARVEWEKK+ALIKAWEESEKIKAENKAYKRLSA++SWE+ +KASIEAQLMKIEEKMEKKKAEY E+MKNKIVGIHK+GEEK+   ++E
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

A0A5A7TJ21 Remorin isoform X11.9e-3182.61Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D+ALARVEWEKK+ALIKAWEESEKIKAENKAYKRLSA++SWE+ +KASIEAQLMKIEEKMEKKKAEY E+MKNKIVGIHK+GEEK+   ++E
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

A0A6J1DZS7 remorin-like isoform X12.2e-3593.48Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEK+   ++E
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

A0A6J1E511 remorin-like isoform X22.2e-3593.48Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEK+   ++E
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

SwissProt top hitse value%identityAlignment
O80837 Remorin1.7e-2159.14Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSEE
        DV LA +E EKK + IKAWEESEK KAEN+A K++S + +WE+ KKA++EAQL KIEEK+EKKKA+Y E+MKNK+  IHK  EEK+ + ++++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSEE

P93788 Remorin2.6e-2260.87Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D  LARV  EK+++LIKAWEESEK KAENKA K++SAI +WE+ KKA++EA+L K+EE++EKKKAEY E+MKNKI  +HK+ EEK+ + +++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

Q9FFA5 Remorin 1.48.2e-2463.04Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D  LARVE EK+++LIKAWEE+EK K ENKA K+LS+I SWE+ KKA++EA+L K+EE++EKKKAEYVE+MKNKI  IHK+ EEK+ + +++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

Q9M2D8 Uncharacterized protein At3g612601.1e-2055.43Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        DV LA +  EK+L+ ++AWEESEK KAENKA K+++ + +WE+ KKA++EAQL KIEE++EKKKAEY E MKNK+  IHK+ EE++ + +++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

Arabidopsis top hitse value%identityAlignment
AT2G45820.1 Remorin family protein1.2e-2259.14Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSEE
        DV LA +E EKK + IKAWEESEK KAEN+A K++S + +WE+ KKA++EAQL KIEEK+EKKKA+Y E+MKNK+  IHK  EEK+ + ++++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSEE

AT3G48940.1 Remorin family protein2.1e-2255.43Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D  L R+E +K+++LIKAWEE+EK K ENKA K++S++ +WE+ KKAS+EA+L KIEE++ KKKA Y E+MKNKI  IHK+ EEK+ + +++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

AT3G61260.1 Remorin family protein7.9e-2255.43Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        DV LA +  EK+L+ ++AWEESEK KAENKA K+++ + +WE+ KKA++EAQL KIEE++EKKKAEY E MKNK+  IHK+ EE++ + +++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

AT5G23750.1 Remorin family protein5.8e-2563.04Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D  LARVE EK+++LIKAWEE+EK K ENKA K+LS+I SWE+ KKA++EA+L K+EE++EKKKAEYVE+MKNKI  IHK+ EEK+ + +++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE

AT5G23750.2 Remorin family protein5.8e-2563.04Show/hide
Query:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE
        D  LARVE EK+++LIKAWEE+EK K ENKA K+LS+I SWE+ KKA++EA+L K+EE++EKKKAEYVE+MKNKI  IHK+ EEK+ + +++
Subjt:  DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACGTTGCGTTAGCTCGAGTCGAGTGGGAGAAGAAGTTGGCCTTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAAGCAGAGAACAAGGCATACAAAAGGCTCTCTGC
CATTGACTCTTGGGAGGACGGCAAAAAAGCCTCCATAGAAGCACAGCTGATGAAGATAGAGGAGAAAATGGAGAAGAAGAAAGCGGAGTATGTCGAAGAAATGAAGAACA
AAATTGTTGGAATTCACAAGCAAGGCGAAGAGAAGCAGCCATTGAGGCAGAGCGAAGAGAGCAATATCTCAAGGTCGAGGAGACCGCTGCAAAATACCGTTCTTCGGGGT
TCACCCCGAAGAATCTACTACTCAAATGCTTCAGTGGTTGAGAAGCTGGGGGTGAAAAAAGTAAAATATAGAACTCCCATCTCCGATTTGCACTCTAGTTTTAGTATTTG
GCTTGGTTTTGTTTTGAGTTTTTGGCAGGAGATGACCTTCAAGGGATTTTTTTTTTTTTTTTTTTAT
mRNA sequenceShow/hide mRNA sequence
GACGTTGCGTTAGCTCGAGTCGAGTGGGAGAAGAAGTTGGCCTTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAAGCAGAGAACAAGGCATACAAAAGGCTCTCTGC
CATTGACTCTTGGGAGGACGGCAAAAAAGCCTCCATAGAAGCACAGCTGATGAAGATAGAGGAGAAAATGGAGAAGAAGAAAGCGGAGTATGTCGAAGAAATGAAGAACA
AAATTGTTGGAATTCACAAGCAAGGCGAAGAGAAGCAGCCATTGAGGCAGAGCGAAGAGAGCAATATCTCAAGGTCGAGGAGACCGCTGCAAAATACCGTTCTTCGGGGT
TCACCCCGAAGAATCTACTACTCAAATGCTTCAGTGGTTGAGAAGCTGGGGGTGAAAAAAGTAAAATATAGAACTCCCATCTCCGATTTGCACTCTAGTTTTAGTATTTG
GCTTGGTTTTGTTTTGAGTTTTTGGCAGGAGATGACCTTCAAGGGATTTTTTTTTTTTTTTTTTTAT
Protein sequenceShow/hide protein sequence
DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSEESNISRSRRPLQNTVLRG
SPRRIYYSNASVVEKLGVKKVKYRTPISDLHSSFSIWLGFVLSFWQEMTFKGFFFFFFY