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MS017992 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017992
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/LRR-repeat protein
Genome locationscaffold373:4516752..4516997
RNA-Seq ExpressionMS017992
SyntenyMS017992
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]2.6e-1259.55Show/hide
Query:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAA--AGKDSHRPHYST-----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+N TPPSLF F  L IILL  TPL A+RRL  +A     DS RP  +T     +PP AV+D  T  S+NY VSLRKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAA--AGKDSHRPHYST-----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0651.14Show/hide
Query:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAA--AGKDSHRPHYST----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+NP      F  L +I+L    PLSA RRLSTA      DS  P  ++    +PP  VE+     SQNYAVS RKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAA--AGKDSHRPHYST----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]2.4e-1051.65Show/hide
Query:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAAAGKDS-----HRPHYS----TEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+N  PP+  F  L +I+L   TPL A+RR  T+A   ++     H P  S    T+PP AVED  T  S+NY VSLRKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAAAGKDS-----HRPHYS----TEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein1.2e-1051.65Show/hide
Query:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAAAGKDS-----HRPHYS----TEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+N  PP+  F  L +I+L   TPL A+RR  T+A   ++     H P  S    T+PP AVED  T  S+NY VSLRKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAAAGKDS-----HRPHYS----TEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
A0A5A7THA6 F-box/LRR-repeat protein1.2e-1259.55Show/hide
Query:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAA--AGKDSHRPHYST-----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+N TPPSLF F  L IILL  TPL A+RRL  +A     DS RP  +T     +PP AV+D  T  S+NY VSLRKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAA--AGKDSHRPHYST-----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAAAACCCCACTCCTCCCTCTCTCTTCTTCTTCCTCCTCCTCCTCATAATTCTCCTCGCCGCCACCCCTCTCTCCGCCTCCCGCCGCCTCTCCACCGCCGC
CGCCGGGAAGGATTCCCACCGTCCGCATTACTCCACGGAGCCGCCGCTCGCCGTGGAAGACAACACCACGCCTCAAAGTCAAAACTACGCCGTTTCGCTCCGCAAAGTCC
CGGCCGGTCCGAACCCACTACATAAC
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAAAACCCCACTCCTCCCTCTCTCTTCTTCTTCCTCCTCCTCCTCATAATTCTCCTCGCCGCCACCCCTCTCTCCGCCTCCCGCCGCCTCTCCACCGCCGC
CGCCGGGAAGGATTCCCACCGTCCGCATTACTCCACGGAGCCGCCGCTCGCCGTGGAAGACAACACCACGCCTCAAAGTCAAAACTACGCCGTTTCGCTCCGCAAAGTCC
CGGCCGGTCCGAACCCACTACATAAC
Protein sequenceShow/hide protein sequence
MASKNPTPPSLFFFLLLLIILLAATPLSASRRLSTAAAGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN