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MS018033 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018033
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1336:42079..42417
RNA-Seq ExpressionMS018033
SyntenyMS018033
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054906.1 hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa]3.5e-1249.57Show/hide
Query:  AAPAACACLVLAILVASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHH-QSSPPPSP-----PVKPLRRLNADGKDKCSEEPEYGHEDAKPNRS
        A P A   L + + + SFSPSS S +A A   +  P PP  P     RSL+FH+  SS P SP     P KPL+R+N + KDKC+E P  G++DAK   S
Subjt:  AAPAACACLVLAILVASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHH-QSSPPPSP-----PVKPLRRLNADGKDKCSEEPEYGHEDAKPNRS

Query:  EEPWPKCHVSKSPPPPF
        ++PWPKC VSKSPPPPF
Subjt:  EEPWPKCHVSKSPPPPF
KAE8646677.1 hypothetical protein Csa_023590, partial [Cucumis sativus]7.2e-1354.9Show/hide
Query:  ASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHH-QSSPPPSP-----PVKPLRRLNADGKDKCSEEPEYGHEDAKPNRSEEPWPKCHVSKSPPP
        ASFSPSS S AA A      P PP  P     R L+FH+  SS PPSP     P K  RR+N + KDKCSE P  G++DAKPN+  +PWPKC V KSPPP
Subjt:  ASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHH-QSSPPPSP-----PVKPLRRLNADGKDKCSEEPEYGHEDAKPNRSEEPWPKCHVSKSPPP

Query:  PF
        PF
Subjt:  PF
TrEMBL top hitse value%identityAlignment
A0A0A0KEF9 Uncharacterized protein9.1e-1452.14Show/hide
Query:  AAPAACACLVLAILVASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHH-QSSPPPSP-----PVKPLRRLNADGKDKCSEEPEYGHEDAKPNRS
        A P A   L + + VASFSPSS S AA A      P PP  P     R L+FH+  SS PPSP     P K  RR+N + KDKCSE P  G++DAKPN+ 
Subjt:  AAPAACACLVLAILVASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHH-QSSPPPSP-----PVKPLRRLNADGKDKCSEEPEYGHEDAKPNRS

Query:  EEPWPKCHVSKSPPPPF
         +PWPKC V KSPPPPF
Subjt:  EEPWPKCHVSKSPPPPF
A0A5D3DGG9 Uncharacterized protein1.7e-1249.57Show/hide
Query:  AAPAACACLVLAILVASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHH-QSSPPPSP-----PVKPLRRLNADGKDKCSEEPEYGHEDAKPNRS
        A P A   L + + + SFSPSS S +A A   +  P PP  P     RSL+FH+  SS P SP     P KPL+R+N + KDKC+E P  G++DAK   S
Subjt:  AAPAACACLVLAILVASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHH-QSSPPPSP-----PVKPLRRLNADGKDKCSEEPEYGHEDAKPNRS

Query:  EEPWPKCHVSKSPPPPF
        ++PWPKC VSKSPPPPF
Subjt:  EEPWPKCHVSKSPPPPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAGCTCCGGCGGCATGCGCATGCCTGGTGTTGGCCATTTTGGTCGCATCCTTCTCTCCAAGTTCGCCGTCCAGAGCCGCCGCCGCAAAATACGGTAATTCTTC
TCCGGCTCCTCCGGCGGCGCCACCAAAGAAGCTCCACCGTTCACTCATATTCCATCACCAGAGCTCTCCCCCGCCGTCGCCGCCGGTGAAACCCCTCCGCCGTCTAAATG
CCGACGGTAAAGACAAGTGTTCCGAAGAACCCGAGTATGGACATGAAGATGCAAAGCCGAATCGGAGTGAGGAGCCTTGGCCGAAGTGCCACGTGTCAAAATCGCCACCA
CCTCCTTTC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAGCTCCGGCGGCATGCGCATGCCTGGTGTTGGCCATTTTGGTCGCATCCTTCTCTCCAAGTTCGCCGTCCAGAGCCGCCGCCGCAAAATACGGTAATTCTTC
TCCGGCTCCTCCGGCGGCGCCACCAAAGAAGCTCCACCGTTCACTCATATTCCATCACCAGAGCTCTCCCCCGCCGTCGCCGCCGGTGAAACCCCTCCGCCGTCTAAATG
CCGACGGTAAAGACAAGTGTTCCGAAGAACCCGAGTATGGACATGAAGATGCAAAGCCGAATCGGAGTGAGGAGCCTTGGCCGAAGTGCCACGTGTCAAAATCGCCACCA
CCTCCTTTC
Protein sequenceShow/hide protein sequence
MAAAPAACACLVLAILVASFSPSSPSRAAAAKYGNSSPAPPAAPPKKLHRSLIFHHQSSPPPSPPVKPLRRLNADGKDKCSEEPEYGHEDAKPNRSEEPWPKCHVSKSPP
PPF