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MS018038 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018038
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1336:99576..99881
RNA-Seq ExpressionMS018038
SyntenyMS018038
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054914.1 hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa]5.3e-0748.54Show/hide
Query:  MGCSMAN-LVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQKPLLRPVKVSHKRKPASARENGDDVSETPISSKDPVGRKPWPKKFVDKSPP
        MGCS AN L+  I VAS+AL LPS TTA A  DP   S    P  P++   +    KV    +  S  ENGDD S+ P S +    RKPWPK  V KSPP
Subjt:  MGCSMAN-LVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQKPLLRPVKVSHKRKPASARENGDDVSETPISSKDPVGRKPWPKKFVDKSPP

Query:  PPF
        PPF
Subjt:  PPF
KAG6578898.1 hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0851.89Show/hide
Query:  MGCSMANLVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPP---PPVHQKPLLRPVKVSHKRKPASARENGDDVSETPISSKDPVG-RKPWPKKFVDK
        MG S ANL+F ILVAS+AL LP    ASA V PS     LPPP    P  Q    RP+KVS      + + +G+D +E P SSKD  G RKPWPK+ V K
Subjt:  MGCSMANLVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPP---PPVHQKPLLRPVKVSHKRKPASARENGDDVSETPISSKDPVG-RKPWPKKFVDK

Query:  SPPPPF
        +PPPPF
Subjt:  SPPPPF
KAG6578899.1 hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0952.29Show/hide
Query:  MGCSMANLVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQK-----PLLRPVKVSHKRKPASARENGDDVSE-TPISSKDPVG-RKPWPKKF
        MG S ANL  VILVAS+AL  PS TTASA V PS      P PPP++          R +K+S + K     ENG+D SE  P SSK   G R+PWPKK 
Subjt:  MGCSMANLVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQK-----PLLRPVKVSHKRKPASARENGDDVSE-TPISSKDPVG-RKPWPKKF

Query:  VDKSPPPPF
        V KSPPPPF
Subjt:  VDKSPPPPF
TrEMBL top hitse value%identityAlignment
A0A0A0K9K2 Uncharacterized protein1.4e-0543.4Show/hide
Query:  MGCSMANLVFV-ILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQKPLL---RPVKVSHKRKPASARENGDDVSETPISSKDPVGRKPWPKKFVDK
        MGCS AN+V + I VAS+AL LP+ TTA A  DP           P+    LL     +KV    +  S   +GDD S+ P+  ++   RKPWPK  V K
Subjt:  MGCSMANLVFV-ILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQKPLL---RPVKVSHKRKPASARENGDDVSETPISSKDPVGRKPWPKKFVDK

Query:  SPPPPF
        SPPPPF
Subjt:  SPPPPF
A0A5A7UIB8 Uncharacterized protein2.6e-0748.54Show/hide
Query:  MGCSMAN-LVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQKPLLRPVKVSHKRKPASARENGDDVSETPISSKDPVGRKPWPKKFVDKSPP
        MGCS AN L+  I VAS+AL LPS TTA A  DP   S    P  P++   +    KV    +  S  ENGDD S+ P S +    RKPWPK  V KSPP
Subjt:  MGCSMAN-LVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQKPLLRPVKVSHKRKPASARENGDDVSETPISSKDPVGRKPWPKKFVDKSPP

Query:  PPF
        PPF
Subjt:  PPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGTTCAATGGCCAATCTAGTTTTTGTTATCTTGGTAGCATCCGTGGCTCTAAGCCTGCCGTCTACAACCACCGCAAGCGCCGCCGTGGACCCTTCTAAAAGGTC
CCTTTTCCTGCCACCGCCGCCGCCAGTACACCAGAAACCATTACTCCGCCCTGTGAAAGTAAGCCATAAACGCAAGCCGGCCTCAGCTCGTGAAAATGGAGACGATGTAT
CTGAAACACCAATATCATCGAAGGATCCCGTGGGAAGGAAACCTTGGCCAAAGAAATTCGTCGATAAATCCCCACCACCTCCATTT
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGTTCAATGGCCAATCTAGTTTTTGTTATCTTGGTAGCATCCGTGGCTCTAAGCCTGCCGTCTACAACCACCGCAAGCGCCGCCGTGGACCCTTCTAAAAGGTC
CCTTTTCCTGCCACCGCCGCCGCCAGTACACCAGAAACCATTACTCCGCCCTGTGAAAGTAAGCCATAAACGCAAGCCGGCCTCAGCTCGTGAAAATGGAGACGATGTAT
CTGAAACACCAATATCATCGAAGGATCCCGTGGGAAGGAAACCTTGGCCAAAGAAATTCGTCGATAAATCCCCACCACCTCCATTT
Protein sequenceShow/hide protein sequence
MGCSMANLVFVILVASVALSLPSTTTASAAVDPSKRSLFLPPPPPVHQKPLLRPVKVSHKRKPASARENGDDVSETPISSKDPVGRKPWPKKFVDKSPPPPF