; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018040 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018040
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA-binding protein 2-like
Genome locationscaffold1336:126661..131210
RNA-Seq ExpressionMS018040
SyntenyMS018040
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141348.1 RNA-binding protein 2-like [Momordica charantia]8.7e-129100Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGSG
        MDEQDPESNYLRLQFSRHPGPRSGSGSG
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGSG

XP_031743537.1 RNA-binding protein 2 isoform X3 [Cucumis sativus]7.9e-12288.8Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        ELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAVSPDLAP
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGSGVQFLFHCFLLLSH
        MDEQDPESNYLRLQFSRHPGPRSGSGSG +       +L H
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGSGVQFLFHCFLLLSH

XP_031743540.1 RNA-binding protein 2 isoform X6 [Cucumis sativus]7.9e-12288.8Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        ELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAVSPDLAP
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGSGVQFLFHCFLLLSH
        MDEQDPESNYLRLQFSRHPGPRSGSGSG +       +L H
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGSGVQFLFHCFLLLSH

XP_031743541.1 RNA-binding protein 2 isoform X7 [Cucumis sativus]1.3e-12192.98Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        ELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAVSPDLAP
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGSG
        MDEQDPESNYLRLQFSRHPGPRSGSGSG
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGSG

XP_038884976.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]6.1e-12293.86Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        ELPSSGLP+GHEMHNYL SDDRGG R+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVGSRMPGP +PDP+VMSRPPAVSPD+AP
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGSG
        MDEQDPESNYLRLQFSRHPGPRSGSGSG
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGSG

TrEMBL top hitse value%identityAlignment
A0A0A0KCN5 RRM domain-containing protein6.9e-15664.88Show/hide
Query:  ALLSLSAELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA
        ALLSLSAELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPA
Subjt:  ALLSLSAELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA

Query:  VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAM
        VSPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAM
Subjt:  VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAM

Query:  SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGVQFLFHCFLLLSHLHGKIHSGTEAGTFRFPASSNAPKSAYFGRHSTHTSMQFPRPSFETQLRLLR
        SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG +         + L   I     AG +R PASSN PKSAY   HST+ S+  P+      L   R
Subjt:  SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGVQFLFHCFLLLSHLHGKIHSGTEAGTFRFPASSNAPKSAYFGRHSTHTSMQFPRPSFETQLRLLR

Query:  LERN-----------MGC------ATAILIAWVCLNVSTKLSAQHVHPSSPPPAAPPPIVSLFPLPPKKHKQLQWSLPPVA-----EPIVPYFPFVY--I
         + N             C        ++L+A V LN+ +K SA + H        PPP+       PKKHKQ   S PPVA     EPIVPYFPFVY  I
Subjt:  LERN-----------MGC------ATAILIAWVCLNVSTKLSAQHVHPSSPPPAAPPPIVSLFPLPPKKHKQLQWSLPPVA-----EPIVPYFPFVY--I

Query:  PSPSVKPYE-HTSPP---PPSPVA-VAEPIVPYFPFVYI--PSPSVKPYEHTSPSPPSPVAVAEPIVPYFPFTFTPSPSEEPYEHTPPPPSAKRPYRSPL
        PSPS KPYE H  PP   P SP++  + P+VPYFPFVY+  PSPS KP E  +PSP   +    P+VPY+ F F+P PS +   + PP P     + SPL
Subjt:  PSPSVKPYE-HTSPP---PPSPVA-VAEPIVPYFPFVYI--PSPSVKPYEHTSPSPPSPVAVAEPIVPYFPFTFTPSPSEEPYEHTPPPPSAKRPYRSPL

Query:  NHLP
           P
Subjt:  NHLP

A0A1S3B4F0 RNA-binding protein 29.4e-12192.95Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        ELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAVSPDLAP
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGS
        MDEQDPESNYLRLQFSRHPGPRSG GS
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGS

A0A6J1CKA2 RNA-binding protein 2-like4.2e-129100Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGSG
        MDEQDPESNYLRLQFSRHPGPRSGSGSG
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGSG

A0A6J1FKI7 RNA-binding protein 2-like isoform X11.8e-11688.51Show/hide
Query:  ALLSLSAELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA
        ALLSLS+E PSSGLP  HEMHNY+ +DD GGPRAVKDTQTIGSAYDRYLQSVQ SSF SGEVPTHG+MGM RP+ANRMP+ +RMPGP +PDPVVMSRP A
Subjt:  ALLSLSAELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA

Query:  VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAM
        VSPDLA NGRNIEY NHLP+DS  RP RETVPLPPDA+NTLYVEGLPSDSSRREVAHIFRPFVGYKELRLV+KESKHRGGDPLILCFVDFANPACAATAM
Subjt:  VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAM

Query:  SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG
        SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG
Subjt:  SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG

A0A6J1JZU6 RNA-binding protein 2-like isoform X11.2e-11889.79Show/hide
Query:  ALLSLSAELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA
        ALLSLS+E PSSGLP  HEMHNY+ +DD GGPRAVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RP+ANRMP+G+RMPGP +PDPVVMSRP A
Subjt:  ALLSLSAELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA

Query:  VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAM
        VSPDLA NGRNIEYGNHLP+DS  RP RETVPLPPDA+NTLYVEGLPSDSSRREVAHIFRPFVGYKELRLV+KESKHRGGDPLILCFVDFANPACAATAM
Subjt:  VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAM

Query:  SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG
        SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG
Subjt:  SALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A2.2e-5053.12Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        E PSS +  GH    Y   +D   P    DT+TIGSAYDRYLQSVQ     SGE    G + M R        G  +      D  ++ R   +  D  P
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR GDP++LCFVDF NPACAATA+SALQGY+
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSG
        MDE + +S +LRLQFSR PG R G
Subjt:  MDEQDPESNYLRLQFSRHPGPRSG

F4HWF9 Nuclear speckle RNA-binding protein B6.6e-6356.95Show/hide
Query:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI
        +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     ++  D  PNGR++
Subjt:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI

Query:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD
         +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ Y+MDE +
Subjt:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD

Query:  PESNYLRLQFSRHPGPRSGSGSG
        P+S  LRLQF R+PGPR G   G
Subjt:  PESNYLRLQFSRHPGPRSGSGSG

G7ID19 RNA-binding protein 28.3e-7462.61Show/hide
Query:  SGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV--SPDLAPNG
        SG+ +G+E+HNY+  ++  G + + DT+ +GSAYDR+LQS  L+SFNSGE    G +G AR V         +PG S+ DP  M     V   PDL+ NG
Subjt:  SGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV--SPDLAPNG

Query:  RNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMD
        R++ +G  LP+D+++RPG ET+PLP DAS+TLYVEGLPSDS++REVAHIFRPFVGY+E+RLV+KESKHRGGDPLILCFVDFANPACAATA+SALQGYK+D
Subjt:  RNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMD

Query:  EQDPESNYLRLQFSRHPGPRSG
        E +PES+YLRLQFSR PG RSG
Subjt:  EQDPESNYLRLQFSRHPGPRSG

Q6JB11 Protein MATERNALLY EXPRESSED GENE 55.3e-2864.52Show/hide
Query:  MDS--MTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDE
        MDS  M   GR   PLPPDAS+TLY+EGLP++ +RREV+HIFRPFVG++E+RLV+KES+H GGDP +LCFVDF NPA A  A+ ALQG+  D+
Subjt:  MDS--MTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDE

Q8H0P8 RNA-binding protein 15.4e-7363.44Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVM-SRPPAVSPDLA
        E+P+SGLP+G+EMH     +DR G   VKD++TIGSAYDRYLQ  Q+ SF SGE  T G +G+ R +         +P  S+ DP  M  R     PDLA
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVM-SRPPAVSPDLA

Query:  PNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGY
        PNGR + YG   PMD ++R G E   LPPDAS TLY+EGLPSD +RREVAHIFRPFVGY+E+RLVSKE+KHR GDPLILCFVDFANPACAATA+SALQGY
Subjt:  PNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGY

Query:  KMDEQDPESNYLRLQFSRHPGPRSGSG
        K+DE +PES++LRLQFSR+PGPRSG G
Subjt:  KMDEQDPESNYLRLQFSRHPGPRSGSG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding4.7e-6456.95Show/hide
Query:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI
        +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     ++  D  PNGR++
Subjt:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI

Query:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD
         +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ Y+MDE +
Subjt:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD

Query:  PESNYLRLQFSRHPGPRSGSGSG
        P+S  LRLQF R+PGPR G   G
Subjt:  PESNYLRLQFSRHPGPRSGSGSG

AT1G21320.2 nucleotide binding;nucleic acid binding4.7e-6456.95Show/hide
Query:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI
        +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     ++  D  PNGR++
Subjt:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI

Query:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD
         +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ Y+MDE +
Subjt:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD

Query:  PESNYLRLQFSRHPGPRSGSGSG
        P+S  LRLQF R+PGPR G   G
Subjt:  PESNYLRLQFSRHPGPRSGSGSG

AT1G26240.1 Proline-rich extensin-like family protein2.0e-0635.62Show/hide
Query:  HVHPSSPPPA----APPPIVSLFPLPPKKHKQLQWSLPPVAEPIVPYFPFVYIPSPSVKPYEHTSPPPPSPVAVAEPIVPYF-------PFVYIPSPSVK
        +V+ S PPP     +PPP   ++  PP          PP      P  P+VY  SP   PY ++SPPPP  V  + P  PY        P+VY  SP   
Subjt:  HVHPSSPPPA----APPPIVSLFPLPPKKHKQLQWSLPPVAEPIVPYFPFVYIPSPSVKPYEHTSPPPPSPVAVAEPIVPYF-------PFVYIPSPSVK

Query:  PYEHTSPSPPSPVAVAEPIVPYF-------PFTF-TPSPSEEPYEHTPPPPSAKRPYRSP
        PY ++SP PP  V  + P  PY        P+ + +PSP    Y+  PPPPS    Y SP
Subjt:  PYEHTSPSPPSPVAVAEPIVPYF-------PFTF-TPSPSEEPYEHTPPPPSAKRPYRSP

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-5153.12Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        E PSS +  GH    Y   +D   P    DT+TIGSAYDRYLQSVQ     SGE    G + M R        G  +      D  ++ R   +  D  P
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR GDP++LCFVDF NPACAATA+SALQGY+
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSG
        MDE + +S +LRLQFSR PG R G
Subjt:  MDEQDPESNYLRLQFSRHPGPRSG

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-4361.7Show/hide
Query:  DPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDF
        D  ++ R   +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR GDP++LCFVDF
Subjt:  DPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDF

Query:  ANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG
         NPACAATA+SALQGY+MDE + +S +LRLQFSR PG R G
Subjt:  ANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCCTTCTTTCACTCTCTGCAGAACTTCCATCCTCTGGATTGCCTACAGGCCATGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAAAGA
TACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGCCTG
TTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGATCCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGTCGA
AATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACGTGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCC
TTCAGACAGTTCCAGGAGAGAAGTAGCTCATATTTTCCGCCCGTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCTCTTA
TATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCCTTGCAAGGTTATAAAATGGACGAACAAGATCCTGAATCTAATTACTTGCGACTC
CAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTCTGGATCTGGTGTACAATTTTTATTTCATTGTTTTCTATTGCTATCACATTTGCATGGTAAGATTCATTCAGGTAC
TGAAGCAGGAACTTTCAGATTTCCTGCATCCTCCAACGCACCAAAATCAGCCTATTTCGGTCGCCATTCAACCCATACGAGTATGCAATTCCCCAGGCCAAGTTTTGAAA
CCCAGCTCCGGTTGTTGAGATTGGAGAGGAATATGGGGTGTGCAACTGCAATACTTATTGCATGGGTCTGTTTAAATGTGTCAACAAAATTAAGTGCACAACACGTTCAT
CCATCTTCTCCTCCTCCAGCAGCTCCTCCTCCCATTGTTTCCTTGTTTCCCTTGCCACCAAAGAAGCATAAGCAATTACAGTGGTCACTACCTCCGGTTGCTGAGCCAAT
AGTTCCCTATTTTCCTTTTGTGTATATACCATCTCCATCTGTGAAGCCTTATGAACACACATCACCACCACCACCATCTCCGGTTGCCGTTGCGGAGCCAATAGTTCCCT
ATTTCCCTTTTGTATATATACCATCTCCATCTGTGAAACCTTATGAACACACATCACCATCACCACCATCTCCGGTTGCTGTTGCCGAACCGATAGTTCCATATTTTCCT
TTCACATTTACACCATCCCCATCGGAGGAACCTTATGAACATACACCACCGCCGCCCTCTGCAAAACGCCCCTATCGTTCTCCACTCAACCACCTTCCCCCG
mRNA sequenceShow/hide mRNA sequence
GCCCTTCTTTCACTCTCTGCAGAACTTCCATCCTCTGGATTGCCTACAGGCCATGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAAAGA
TACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGCCTG
TTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGATCCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGTCGA
AATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACGTGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCC
TTCAGACAGTTCCAGGAGAGAAGTAGCTCATATTTTCCGCCCGTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCTCTTA
TATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCCTTGCAAGGTTATAAAATGGACGAACAAGATCCTGAATCTAATTACTTGCGACTC
CAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTCTGGATCTGGTGTACAATTTTTATTTCATTGTTTTCTATTGCTATCACATTTGCATGGTAAGATTCATTCAGGTAC
TGAAGCAGGAACTTTCAGATTTCCTGCATCCTCCAACGCACCAAAATCAGCCTATTTCGGTCGCCATTCAACCCATACGAGTATGCAATTCCCCAGGCCAAGTTTTGAAA
CCCAGCTCCGGTTGTTGAGATTGGAGAGGAATATGGGGTGTGCAACTGCAATACTTATTGCATGGGTCTGTTTAAATGTGTCAACAAAATTAAGTGCACAACACGTTCAT
CCATCTTCTCCTCCTCCAGCAGCTCCTCCTCCCATTGTTTCCTTGTTTCCCTTGCCACCAAAGAAGCATAAGCAATTACAGTGGTCACTACCTCCGGTTGCTGAGCCAAT
AGTTCCCTATTTTCCTTTTGTGTATATACCATCTCCATCTGTGAAGCCTTATGAACACACATCACCACCACCACCATCTCCGGTTGCCGTTGCGGAGCCAATAGTTCCCT
ATTTCCCTTTTGTATATATACCATCTCCATCTGTGAAACCTTATGAACACACATCACCATCACCACCATCTCCGGTTGCTGTTGCCGAACCGATAGTTCCATATTTTCCT
TTCACATTTACACCATCCCCATCGGAGGAACCTTATGAACATACACCACCGCCGCCCTCTGCAAAACGCCCCTATCGTTCTCCACTCAACCACCTTCCCCCG
Protein sequenceShow/hide protein sequence
ALLSLSAELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGR
NIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRL
QFSRHPGPRSGSGSGVQFLFHCFLLLSHLHGKIHSGTEAGTFRFPASSNAPKSAYFGRHSTHTSMQFPRPSFETQLRLLRLERNMGCATAILIAWVCLNVSTKLSAQHVH
PSSPPPAAPPPIVSLFPLPPKKHKQLQWSLPPVAEPIVPYFPFVYIPSPSVKPYEHTSPPPPSPVAVAEPIVPYFPFVYIPSPSVKPYEHTSPSPPSPVAVAEPIVPYFP
FTFTPSPSEEPYEHTPPPPSAKRPYRSPLNHLPP