; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018045 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018045
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein MKS1-like
Genome locationscaffold1336:167702..168082
RNA-Seq ExpressionMS018045
SyntenyMS018045
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7834171.1 protein MKS1 [Senna tora]3.1e-1241.45Show/hide
Query:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPS---RALQLRHHHQQRRQP-PLVIYELSPQVKNVPAADFMAYVQQQTGYHPS-------AAAASTSS
        PP  +E+ L GPRP+ LSV+KDS KI+KPPLPP     A   R H QQ+  P PL+IY +SP+  NVP  DFM  VQ+ TG   S       + AA  +S
Subjt:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPS---RALQLRHHHQQRRQP-PLVIYELSPQVKNVPAADFMAYVQQQTGYHPS-------AAAASTSS

Query:  VDVTEPEPTTAPHSPP----------------GILSPTPTSLPSISPNIFTP
        ++ T P       S                  GILSP P +LP+IS ++F+P
Subjt:  VDVTEPEPTTAPHSPP----------------GILSPTPTSLPSISPNIFTP

RZR79985.1 hypothetical protein BHM03_00005866 [Ensete ventricosum]1.7e-1040.79Show/hide
Query:  PRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQ-----LRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYH-------PS------AA
        PRR+   L GPRPA L V+K+S KIKKPP+ PS   Q          QQ+ + P++IY +SP++ +   ++FM  VQ+ TG +       PS      + 
Subjt:  PRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQ-----LRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYH-------PS------AA

Query:  AASTSSVDVTEPEPTTA---------PHSPPGILSPTPTSLPSISPNIFTPT
        AA  +S + T P P  A         P S PGILSP P SLP ISPN+F+P+
Subjt:  AASTSSVDVTEPEPTTA---------PHSPPGILSPTPTSLPSISPNIFTPT

XP_006854610.1 protein MKS1 [Amborella trichopoda]5.2e-1243.54Show/hide
Query:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPP--LPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAS------------
        PPR++   L GPRPA L V KDS KIKKPP  LPP  +L L H  Q R  PP++IY +SP+V +  A+DFM  VQ  TG   S+   S            
Subjt:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPP--LPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAS------------

Query:  ----TSSVDVTEP--EPTTAPHSPPGILSPTPTSLPSISPNIFTPTP
            +S +   E    P +  H   GILSP P+SLP ISP+ F P+P
Subjt:  ----TSSVDVTEP--EPTTAPHSPPGILSPTPTSLPSISPNIFTPTP

XP_022141658.1 protein MKS1-like [Momordica charantia]1.1e-5999.22Show/hide
Query:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPS-AAAASTSSVDVTEPEPTT
        PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPS AAAASTSSVDVTEPEPTT
Subjt:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPS-AAAASTSSVDVTEPEPTT

Query:  APHSPPGILSPTPTSLPSISPNIFTPTP
        APHSPPGILSPTPTSLPSISPNIFTPTP
Subjt:  APHSPPGILSPTPTSLPSISPNIFTPTP

XP_028766054.1 protein MKS1 [Prosopis alba]1.5e-1140.79Show/hide
Query:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPP----SRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG-YHPS------AAAASTSS
        PP R+E+ L GPRP+ LSV+K+S KI+KPPLPP      A   RH  QQ +  P++IY +SP+V +VP  DFM  VQ+ TG   PS      + AA  +S
Subjt:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPP----SRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG-YHPS------AAAASTSS

Query:  VDVTEPEPTTAPHSPP----------------GILSPTPTSLPSISPNIFTP
        ++ T P       +                  GILSP P S+P IS  IF+P
Subjt:  VDVTEPEPTTAPHSPP----------------GILSPTPTSLPSISPNIFTP

TrEMBL top hitse value%identityAlignment
A0A5A7UZA1 Protein MKS1-like3.1e-1037.32Show/hide
Query:  PRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSV--DVTEPEPTT
        P +KE+ L GPRP+AL + KDS KIKKPPLPP +              P++IY +SP++ +     F   VQ+ TG+H   +++S  ++  D   P+P +
Subjt:  PRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSV--DVTEPEPTT

Query:  APHSPP--------------GILSPTPTSLPSISPNIFTPTP
         P +                GILSPTP  LP ISP IF+  P
Subjt:  APHSPP--------------GILSPTPTSLPSISPNIFTPTP

A0A6J1CL52 protein MKS1-like5.5e-6099.22Show/hide
Query:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPS-AAAASTSSVDVTEPEPTT
        PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPS AAAASTSSVDVTEPEPTT
Subjt:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPS-AAAASTSSVDVTEPEPTT

Query:  APHSPPGILSPTPTSLPSISPNIFTPTP
        APHSPPGILSPTPTSLPSISPNIFTPTP
Subjt:  APHSPPGILSPTPTSLPSISPNIFTPTP

A0A7J8Z731 VQ domain-containing protein4.0e-1037.21Show/hide
Query:  RKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQ-RRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEPEP-----
        RKE  L GPRPA L V KDS KIKKPPL P   LQ + H Q  + +PP++IY +SP+V +   +DFM  VQ+ TG   S+++ S++    T   P     
Subjt:  RKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQ-RRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEPEP-----

Query:  TTAPHSP--------------------------------------------PGILSPTPTSLPSISPNIFTP
        T+   SP                                            PGILSP PTSLP ISPN F+P
Subjt:  TTAPHSP--------------------------------------------PGILSPTPTSLPSISPNIFTP

I1KTG3 VQ domain-containing protein5.3e-1041.22Show/hide
Query:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQP----PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAA----AASTSSVDV
        PP +KE+ L G RP  L V+KDS KI+KPPLPP+        HQ    P    P++IY +SP+V +VPA DFM  VQ+ TG  PS+     AA  +S++ 
Subjt:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQP----PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAA----AASTSSVDV

Query:  TEPEPTTAPHSP----------------PGILSPTPTSLPSISPNIFT
        T P      HS                 PGILS  P +LP ISP  F+
Subjt:  TEPEPTTAPHSP----------------PGILSPTPTSLPSISPNIFT

U5D3U9 VQ domain-containing protein2.5e-1243.54Show/hide
Query:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPP--LPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAS------------
        PPR++   L GPRPA L V KDS KIKKPP  LPP  +L L H  Q R  PP++IY +SP+V +  A+DFM  VQ  TG   S+   S            
Subjt:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPP--LPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAS------------

Query:  ----TSSVDVTEP--EPTTAPHSPPGILSPTPTSLPSISPNIFTPTP
            +S +   E    P +  H   GILSP P+SLP ISP+ F P+P
Subjt:  ----TSSVDVTEP--EPTTAPHSPPGILSPTPTSLPSISPNIFTPTP

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B3.2e-0438.53Show/hide
Query:  GPRPAALSVAKDSLK-IKKPPL-PPSRALQLRHHHQQR----RQP--PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEPEPT-TAP
        GP+P  L V  DS K IKKPPL PP    Q    HQQ     R P  P+ IY ++P++ +    +FM  VQ+ TG   ++  +S+SS   +EP+ T T  
Subjt:  GPRPAALSVAKDSLK-IKKPPL-PPSRALQLRHHHQQR----RQP--PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEPEPT-TAP

Query:  HSPPGILSP
         +  G++SP
Subjt:  HSPPGILSP

Q8LGD5 Protein MKS13.1e-0732.47Show/hide
Query:  RRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG--------------YHPSAAAASTS
        +++++ + GPRP+ LSV KDS KIKKPP  P+             + P+VIY +SP+V +  A++FM  VQ+ TG                P+A  AST 
Subjt:  RRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG--------------YHPSAAAASTS

Query:  S-----------------VDVTEPEPTTAPHSPPGILSPTPTSLPSISPNIFTP
        +                 ++    E        PGILSP+P  LP+ S  IF+P
Subjt:  S-----------------VDVTEPEPTTAPHSPPGILSPTPTSLPSISPNIFTP

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding2.3e-0538.53Show/hide
Query:  GPRPAALSVAKDSLK-IKKPPL-PPSRALQLRHHHQQR----RQP--PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEPEPT-TAP
        GP+P  L V  DS K IKKPPL PP    Q    HQQ     R P  P+ IY ++P++ +    +FM  VQ+ TG   ++  +S+SS   +EP+ T T  
Subjt:  GPRPAALSVAKDSLK-IKKPPL-PPSRALQLRHHHQQR----RQP--PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEPEPT-TAP

Query:  HSPPGILSP
         +  G++SP
Subjt:  HSPPGILSP

AT1G21326.1 VQ motif-containing protein8.6e-0537.61Show/hide
Query:  GPRPAALSVAKDSLK-IKKPPL-PPSRALQLRHHHQQR----RQP--PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEP-EPTTAP
        GPRP  L V  DS K IKKPPL PP    Q    HQQ     R P  P++IY +SP++ +    +FM  VQ+ TG   ++  +S+ S   + P + +T  
Subjt:  GPRPAALSVAKDSLK-IKKPPL-PPSRALQLRHHHQQR----RQP--PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEP-EPTTAP

Query:  HSPPGILSP
         +  G++SP
Subjt:  HSPPGILSP

AT3G18360.1 VQ motif-containing protein8.6e-0540Show/hide
Query:  PLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG
        P   P P  L V KDS  IKKPP P S +   +  H      P++IY  +P++ +    DFMA VQ+ TG
Subjt:  PLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG

AT3G18690.1 MAP kinase substrate 12.2e-0832.47Show/hide
Query:  RRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG--------------YHPSAAAASTS
        +++++ + GPRP+ LSV KDS KIKKPP  P+             + P+VIY +SP+V +  A++FM  VQ+ TG                P+A  AST 
Subjt:  RRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG--------------YHPSAAAASTS

Query:  S-----------------VDVTEPEPTTAPHSPPGILSPTPTSLPSISPNIFTP
        +                 ++    E        PGILSP+P  LP+ S  IF+P
Subjt:  S-----------------VDVTEPEPTTAPHSPPGILSPTPTSLPSISPNIFTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTCCGAGAAGAAAAGAAATTCCACTGAATGGCCCCCGCCCCGCCGCCCTCTCCGTCGCCAAAGACTCTCTAAAGATCAAGAAGCCGCCGCTTCCGCCGTCCCGTGCCCT
CCAACTCCGCCACCACCACCAGCAACGCCGGCAACCGCCCCTCGTAATCTACGAACTCTCCCCACAGGTTAAGAACGTCCCCGCCGCTGACTTTATGGCCTACGTCCAAC
AACAAACCGGCTACCACCCCTCCGCCGCCGCCGCTTCTACTTCCTCCGTCGACGTCACCGAACCCGAACCCACGACGGCGCCTCATTCTCCGCCGGGGATCCTCTCCCCC
ACCCCCACTTCCCTGCCATCCATTTCCCCCAATATTTTCACGCCGACGCCG
mRNA sequenceShow/hide mRNA sequence
CCTCCGAGAAGAAAAGAAATTCCACTGAATGGCCCCCGCCCCGCCGCCCTCTCCGTCGCCAAAGACTCTCTAAAGATCAAGAAGCCGCCGCTTCCGCCGTCCCGTGCCCT
CCAACTCCGCCACCACCACCAGCAACGCCGGCAACCGCCCCTCGTAATCTACGAACTCTCCCCACAGGTTAAGAACGTCCCCGCCGCTGACTTTATGGCCTACGTCCAAC
AACAAACCGGCTACCACCCCTCCGCCGCCGCCGCTTCTACTTCCTCCGTCGACGTCACCGAACCCGAACCCACGACGGCGCCTCATTCTCCGCCGGGGATCCTCTCCCCC
ACCCCCACTTCCCTGCCATCCATTTCCCCCAATATTTTCACGCCGACGCCG
Protein sequenceShow/hide protein sequence
PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAASTSSVDVTEPEPTTAPHSPPGILSP
TPTSLPSISPNIFTPTP