; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018053 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018053
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF150 domain-containing protein
Genome locationscaffold1336:222943..225805
RNA-Seq ExpressionMS018053
SyntenyMS018053
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR003728 - Ribosome maturation factor RimP
IPR028989 - Ribosome maturation factor RimP, N-terminal
IPR035956 - RimP, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141365.1 uncharacterized protein LOC111011782 isoform X1 [Momordica charantia]3.1e-16799.04Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
        VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY

Query:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
        FEEEYVEDNNAEVYVGDGGEGGGISLA TWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
Subjt:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD
        SVPENISLEVSSPGVERVV+IPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSW LADVRINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDF
        SLRLVRLYSDF
Subjt:  SLRLVRLYSDF

XP_022141366.1 uncharacterized protein LOC111011782 isoform X2 [Momordica charantia]3.1e-15995.82Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
        VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY

Query:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
        FEEEYVEDNNAEVYVGDGGEGGGISLA TWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
Subjt:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD
        SVPENISLE           IPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSW LADVRINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDF
        SLRLVRLYSDF
Subjt:  SLRLVRLYSDF

XP_022939572.1 uncharacterized protein LOC111445430 isoform X2 [Cucurbita moschata]1.4e-13882.96Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
        V++T RNFRLSAV  S ILP++GFR SLI PR + FPFV H  P   +NPL++HARK+NSESEPV+KRNIVEEVS DEE+D  LDELEDDEIMDDDGEDY
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY

Query:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
        FEEE++ED NAEVYVGDGGEGGGISLA TWWDK+ALA+AEEVILSFDG+LKIYAFKTVSNSTVQVRIEKLSNKSGSP MEDIEAFSS YR RLDEAEL+K
Subjt:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD
        +VPENISLEVSSPGVERVVRIPDELDRFKER +YVKYTND+ T  S SESDG+FKLVSF++E RCC WGLADVRINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDF
        SLRLVRLYSD+
Subjt:  SLRLVRLYSDF

XP_022993908.1 uncharacterized protein LOC111489765 isoform X1 [Cucurbita maxima]2.6e-13782.69Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDEL-EDDEIMDDDGED
        VL+T  NFRLSAV  S ILP++GFR SLI PR + FPFV H  P   +NPL++HARK+NSESEPV+KRNIVEEVS DEE+D+ LDEL EDDEIMDDDGED
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDEL-EDDEIMDDDGED

Query:  YFEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELA
        YFEEE++ED NAEVYVGDGGEGGGISLA TWWDK+ALA+AEEVILSFDG+LKIYAFKTVSNSTVQVRIEKLSNKSGSP MEDIEAFSS YR RLDEAEL+
Subjt:  YFEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELA

Query:  KSVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPF
        K+VPENISLEVSSPGVERVVRIPDELDRFKER +YVKY ND+ T  S SESDG+FKLVSFD+E RCC WGLADVRINREKAGKGRPLSKKQREWRLETPF
Subjt:  KSVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPF

Query:  DSLRLVRLYSDF
        DSLRLVRLYSD+
Subjt:  DSLRLVRLYSDF

XP_038884405.1 uncharacterized protein LOC120075260 [Benincasa hispida]7.2e-14083.87Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
        VL+T RN RLSAVS S ILP +GFRWS I PR + FPFVEH LP   +NPL++HARKRNSESEPVLKRNIVEEVS DEE+D+ LDELE+DEIM+DDGEDY
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY

Query:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
        FEE+Y+E  NAEVY GDGGEGGGISLA TWWDK+ALAIAEEVILSF G+LKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFS+TYR RLDEAELAK
Subjt:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD
        SVPEN+SLEVSSPGVERVV+IPDELDRFKER +YVKYTND+ATA S SESDG+FKLVSFD+EA+ C+WGLADV+INREKAGKGRPLSKKQR+WRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSD
        SLRLVRLYSD
Subjt:  SLRLVRLYSD

TrEMBL top hitse value%identityAlignment
A0A6J1CHV5 uncharacterized protein LOC111011782 isoform X11.5e-16799.04Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
        VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY

Query:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
        FEEEYVEDNNAEVYVGDGGEGGGISLA TWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
Subjt:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD
        SVPENISLEVSSPGVERVV+IPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSW LADVRINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDF
        SLRLVRLYSDF
Subjt:  SLRLVRLYSDF

A0A6J1CIZ0 uncharacterized protein LOC111011782 isoform X21.5e-15995.82Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
        VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY

Query:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
        FEEEYVEDNNAEVYVGDGGEGGGISLA TWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
Subjt:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD
        SVPENISLE           IPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSW LADVRINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDF
        SLRLVRLYSDF
Subjt:  SLRLVRLYSDF

A0A6J1FGA6 uncharacterized protein LOC111445430 isoform X15.8e-13582.89Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
        V++T RNFRLSAV  S ILP++GFR SLI PR + FPFV H  P   +NPL++HARK+NSESEPV+KRNIVEEVS DEE+D  LDELEDDEIMDDDGEDY
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY

Query:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
        FEEE++ED NAEVYVGDGGEGGGISLA TWWDK+ALA+AEEVILSFDG+LKIYAFKTVSNSTVQVRIEKLSNKSGSP MEDIEAFSS YR RLDEAEL+K
Subjt:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD
        +VPENISLEVSSPGVERVVRIPDELDRFKER +YVKYTND+ T  S SESDG+FKLVSF++E RCC WGLADVRINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRL
        SLRL
Subjt:  SLRL

A0A6J1FH63 uncharacterized protein LOC111445430 isoform X26.6e-13982.96Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY
        V++T RNFRLSAV  S ILP++GFR SLI PR + FPFV H  P   +NPL++HARK+NSESEPV+KRNIVEEVS DEE+D  LDELEDDEIMDDDGEDY
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDY

Query:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK
        FEEE++ED NAEVYVGDGGEGGGISLA TWWDK+ALA+AEEVILSFDG+LKIYAFKTVSNSTVQVRIEKLSNKSGSP MEDIEAFSS YR RLDEAEL+K
Subjt:  FEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD
        +VPENISLEVSSPGVERVVRIPDELDRFKER +YVKYTND+ T  S SESDG+FKLVSF++E RCC WGLADVRINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDF
        SLRLVRLYSD+
Subjt:  SLRLVRLYSDF

A0A6J1K3N1 uncharacterized protein LOC111489765 isoform X11.2e-13782.69Show/hide
Query:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDEL-EDDEIMDDDGED
        VL+T  NFRLSAV  S ILP++GFR SLI PR + FPFV H  P   +NPL++HARK+NSESEPV+KRNIVEEVS DEE+D+ LDEL EDDEIMDDDGED
Subjt:  VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDEL-EDDEIMDDDGED

Query:  YFEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELA
        YFEEE++ED NAEVYVGDGGEGGGISLA TWWDK+ALA+AEEVILSFDG+LKIYAFKTVSNSTVQVRIEKLSNKSGSP MEDIEAFSS YR RLDEAEL+
Subjt:  YFEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELA

Query:  KSVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPF
        K+VPENISLEVSSPGVERVVRIPDELDRFKER +YVKY ND+ T  S SESDG+FKLVSFD+E RCC WGLADVRINREKAGKGRPLSKKQREWRLETPF
Subjt:  KSVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPF

Query:  DSLRLVRLYSDF
        DSLRLVRLYSD+
Subjt:  DSLRLVRLYSDF

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP6.0e-0433.8Show/hide
Query:  SNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFK
        +++ +++ ++ L++K+GS S+ED E  S   +  LD+         + +L+VSS G ERV+R+P++L RF+
Subjt:  SNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFK

B0SQH2 Ribosome maturation factor RimP6.0e-0433.8Show/hide
Query:  SNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFK
        +++ +++ ++ L++K+GS S+ED E  S   +  LD+         + +L+VSS G ERV+R+P++L RF+
Subjt:  SNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFK

Q72NX1 Ribosome maturation factor RimP1.2e-0428.68Show/hide
Query:  AEEVILSFDGEL----KIYAFKT---VSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER
        +EE+    DG L    K+Y+ K     ++S ++V ++ L +  GS S+ + E  S   +  L+      S   + +L+VSS G ER + +P +LDRF+  
Subjt:  AEEVILSFDGEL----KIYAFKT---VSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER

Query:  PLYVKYTNDIATAGSFSESDGVFKLVSFD
        P+ + + ++     S  E +G+F++V+ D
Subjt:  PLYVKYTNDIATAGSFSESDGVFKLVSFD

Q8F7K3 Ribosome maturation factor RimP1.2e-0428.68Show/hide
Query:  AEEVILSFDGEL----KIYAFKT---VSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER
        +EE+    DG L    K+Y+ K     ++S ++V ++ L +  GS S+ + E  S   +  L+      S   + +L+VSS G ER + +P +LDRF+  
Subjt:  AEEVILSFDGEL----KIYAFKT---VSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER

Query:  PLYVKYTNDIATAGSFSESDGVFKLVSFD
        P+ + + ++     S  E +G+F++V+ D
Subjt:  PLYVKYTNDIATAGSFSESDGVFKLVSFD

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00901.9e-4538.38Show/hide
Query:  SNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDYFEEEYVEDNNAEV
        S+S +LP+T  R  L LPR   FPF      F  S          +S   P  +       + DEE+       +D E+++D  ED       ED + E 
Subjt:  SNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDYFEEEYVEDNNAEV

Query:  YVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSP
         +GDGG+GGGI L    W ++ L+IA +V+   + +L+++AFKT     + VR++KLS + G P+M+++E FS  ++ RLD+A   K +PE+++LEVSSP
Subjt:  YVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSP

Query:  GVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD
        G ER++R+P++L RFK+ P+ V Y  +  T    +   GVF L S D E+  C W LADVR NR+   KGRPLS+KQ++ R+  PF   + + LY D
Subjt:  GVERVVRIPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD

AT1G69210.2 Uncharacterised protein family UPF00906.7e-1934.52Show/hide
Query:  SNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDYFEEEYVEDNNAEV
        S+S +LP+T  R  L LPR   FPF      F  S          +S   P  +       + DEE+       +D E+++D  ED       ED + E 
Subjt:  SNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDYFEEEYVEDNNAEV

Query:  YVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEV
         +GDGG+GGGI L    W ++ L+IA +V+   + +L+++AFKT     + VR++KLS + G P+M+++E FS  ++ RLD+A   K +PE+++LEV
Subjt:  YVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEV

AT1G77122.1 Uncharacterised protein family UPF00907.3e-8260.89Show/hide
Query:  HARKRNSESEPVLKRNIVEEVSM------DEEEDIYL--------DELEDDEIMDDDGEDYFEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIA
        HA+++N  S    K N VEE+ +      +EEE+I L        DEL  D+  D+D +D FE    +++  E+Y GDGG GGGI LA T WDK ALA+A
Subjt:  HARKRNSESEPVLKRNIVEEVSM------DEEEDIYL--------DELEDDEIMDDDGEDYFEEEYVEDNNAEVYVGDGGEGGGISLARTWWDKKALAIA

Query:  EEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTN
         +V  SFDG+L IYAFKT+ NST+QVRIE+L+NK GSP+MEDIEAFS+ YR +L EAELAKS+P+NISLEVSSPGVERVVRIP +LDR+K+RP+YV+YTN
Subjt:  EEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERPLYVKYTN

Query:  DIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD
        +     + +E DG+F+LVSFD+EA+ C WG+AD+R+NREKAGKGRPLSKKQREWRLET F+SLRLVRL+S+
Subjt:  DIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCTTGGTTACGGCCCGAAATTTCAGACTCTCTGCAGTTTCAAATTCACCAATTCTTCCAGAGACTGGCTTCAGATGGTCTTTAATCTTGCCTAGAAAAATTTCCTTCCC
ATTTGTTGAGCATCCGCTTCCTTTTAAGTTGAGTAATCCACTTATAGTTCATGCCAGAAAGAGAAATTCAGAATCGGAGCCAGTTCTCAAACGAAACATTGTCGAGGAAG
TGTCGATGGACGAAGAAGAGGACATTTATCTCGATGAACTTGAAGATGATGAGATAATGGACGATGATGGCGAAGATTACTTTGAAGAAGAATATGTGGAGGATAATAAT
GCTGAAGTTTATGTAGGGGATGGGGGGGAAGGAGGTGGAATTTCCCTTGCCCGGACATGGTGGGATAAAAAAGCACTGGCTATAGCTGAAGAAGTCATTCTTTCTTTTGA
TGGCGAGTTGAAGATTTATGCCTTCAAAACAGTCTCTAATTCCACTGTTCAAGTGCGCATTGAAAAGCTTTCGAACAAATCTGGTTCCCCCAGTATGGAAGATATTGAGG
CTTTTTCTTCAACATATCGAACACGATTGGATGAAGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGGGTTGAACGGGTTGTTCGG
ATTCCTGATGAGCTGGACCGGTTCAAAGAAAGACCATTGTACGTGAAATACACAAATGATATAGCTACAGCTGGTTCCTTCTCAGAGAGCGATGGGGTTTTCAAACTTGT
GTCGTTTGACTTGGAAGCAAGATGCTGTTCTTGGGGTTTAGCAGACGTGAGGATAAATAGAGAGAAGGCAGGGAAAGGAAGACCACTAAGCAAAAAGCAAAGAGAGTGGC
GTTTGGAGACTCCCTTTGATTCATTACGTTTGGTTAGGTTGTATTCTGATTTT
mRNA sequenceShow/hide mRNA sequence
GTCTTGGTTACGGCCCGAAATTTCAGACTCTCTGCAGTTTCAAATTCACCAATTCTTCCAGAGACTGGCTTCAGATGGTCTTTAATCTTGCCTAGAAAAATTTCCTTCCC
ATTTGTTGAGCATCCGCTTCCTTTTAAGTTGAGTAATCCACTTATAGTTCATGCCAGAAAGAGAAATTCAGAATCGGAGCCAGTTCTCAAACGAAACATTGTCGAGGAAG
TGTCGATGGACGAAGAAGAGGACATTTATCTCGATGAACTTGAAGATGATGAGATAATGGACGATGATGGCGAAGATTACTTTGAAGAAGAATATGTGGAGGATAATAAT
GCTGAAGTTTATGTAGGGGATGGGGGGGAAGGAGGTGGAATTTCCCTTGCCCGGACATGGTGGGATAAAAAAGCACTGGCTATAGCTGAAGAAGTCATTCTTTCTTTTGA
TGGCGAGTTGAAGATTTATGCCTTCAAAACAGTCTCTAATTCCACTGTTCAAGTGCGCATTGAAAAGCTTTCGAACAAATCTGGTTCCCCCAGTATGGAAGATATTGAGG
CTTTTTCTTCAACATATCGAACACGATTGGATGAAGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGGGTTGAACGGGTTGTTCGG
ATTCCTGATGAGCTGGACCGGTTCAAAGAAAGACCATTGTACGTGAAATACACAAATGATATAGCTACAGCTGGTTCCTTCTCAGAGAGCGATGGGGTTTTCAAACTTGT
GTCGTTTGACTTGGAAGCAAGATGCTGTTCTTGGGGTTTAGCAGACGTGAGGATAAATAGAGAGAAGGCAGGGAAAGGAAGACCACTAAGCAAAAAGCAAAGAGAGTGGC
GTTTGGAGACTCCCTTTGATTCATTACGTTTGGTTAGGTTGTATTCTGATTTT
Protein sequenceShow/hide protein sequence
VLVTARNFRLSAVSNSPILPETGFRWSLILPRKISFPFVEHPLPFKLSNPLIVHARKRNSESEPVLKRNIVEEVSMDEEEDIYLDELEDDEIMDDDGEDYFEEEYVEDNN
AEVYVGDGGEGGGISLARTWWDKKALAIAEEVILSFDGELKIYAFKTVSNSTVQVRIEKLSNKSGSPSMEDIEAFSSTYRTRLDEAELAKSVPENISLEVSSPGVERVVR
IPDELDRFKERPLYVKYTNDIATAGSFSESDGVFKLVSFDLEARCCSWGLADVRINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDF