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MS018085 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018085
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBEACH domain-containing protein C2
Genome locationscaffold621:54547..54920
RNA-Seq ExpressionMS018085
SyntenyMS018085
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR000409 - BEACH domain
IPR036372 - BEACH domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR58455.1 hypothetical protein CICLE_v100184682mg, partial [Citrus clementina]1.8e-1256.76Show/hide
Query:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        ++ + + +  + +L  QLQG KFDH DR+FSD+A+T N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

RVW41089.1 BEACH domain-containing protein C2 [Vitis vinifera]1.8e-1265.62Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L  QLQG KFDH DR+FSD+ ST N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

XP_015893032.2 BEACH domain-containing protein C2 [Ziziphus jujuba]1.3e-1265.62Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L+ QLQG KFDH DR+FSD+A T N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

XP_022146927.1 BEACH domain-containing protein C2 [Momordica charantia]1.3e-1258.11Show/hide
Query:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        ++ + + +  + +L  QLQG KFDH DRLFSD+A T N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

XP_034709172.1 BEACH domain-containing protein C2 isoform X2 [Vitis riparia]1.8e-1265.62Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L  QLQG KFDH DR+FSD+ ST N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

TrEMBL top hitse value%identityAlignment
A0A067H204 Uncharacterized protein (Fragment)8.5e-1356.76Show/hide
Query:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        ++ + + +  + +L  QLQG KFDH DR+FSD+A+T N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

A0A438E019 BEACH domain-containing protein C28.5e-1365.62Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L  QLQG KFDH DR+FSD+ ST N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

A0A6J1D0Y5 BEACH domain-containing protein C26.5e-1358.11Show/hide
Query:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        ++ + + +  + +L  QLQG KFDH DRLFSD+A T N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

A0A6P4AD45 BEACH domain-containing protein C26.5e-1365.62Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L+ QLQG KFDH DR+FSD+A T N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

A5B5Q4 Uncharacterized protein8.5e-1365.62Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L  QLQG KFDH DR+FSD+ ST N VLEDMSDVK  +   FYLP+ILTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

SwissProt top hitse value%identityAlignment
F4I9T0 BEACH domain-containing protein B1.1e-0642.42Show/hide
Query:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENS
        ++ +   L  + SL   LQG KFDH DRLF  +  +    L + SDVK  I  FFY+P+ L N NS
Subjt:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENS

F4IG73 BEACH domain-containing protein C21.5e-1462.5Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L  QLQG KFDH DR+FSD   T N VLEDMSDVK  +   FYLP++LTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

F4JD14 BEACH domain-containing protein C11.4e-0448.78Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKRIS
        + +L  QLQG KFD  D++FSD+A+T   VL+DM++VK ++
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKRIS

Q54U63 BEACH domain-containing protein lvsC1.4e-0437.84Show/hide
Query:  LVLFF-YSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQ
        +VLF+   L  + +    LQG +FDH DR+F  +A   +  L   +DVK  I  F+Y+P+ LTN N I +   Q
Subjt:  LVLFF-YSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQ

Q55AV3 BEACH domain-containing protein lvsD4.1e-0438.6Show/hide
Query:  QLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKRIS-NFFYLPKILTNENSIVYDTTQ
        +LQ   FDH DR+F  +       L   SDVK ++  FFYLP+ L N N + +   Q
Subjt:  QLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKRIS-NFFYLPKILTNENSIVYDTTQ

Arabidopsis top hitse value%identityAlignment
AT1G58230.1 binding8.1e-0842.42Show/hide
Query:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENS
        ++ +   L  + SL   LQG KFDH DRLF  +  +    L + SDVK  I  FFY+P+ L N NS
Subjt:  LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENS

AT2G45540.1 WD-40 repeat family protein / beige-related1.1e-1562.5Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L  QLQG KFDH DR+FSD   T N VLEDMSDVK  +   FYLP++LTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

AT2G45540.2 WD-40 repeat family protein / beige-related1.1e-1562.5Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL
        + +L  QLQG KFDH DR+FSD   T N VLEDMSDVK  +   FYLP++LTNENSI + TTQL
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKR-ISNFFYLPKILTNENSIVYDTTQL

AT3G60920.1 CONTAINS InterPro DOMAIN/s: Beige/BEACH (InterPro:IPR000409)9.9e-0648.78Show/hide
Query:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKRIS
        + +L  QLQG KFD  D++FSD+A+T   VL+DM++VK ++
Subjt:  YNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKRIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGTATTATTTTTTTATAGTTTGACAATTTACAACTCTCTCGATTCTCAGCTGCAAGGTCACAAATTCGATCATGTAGATCGGTTATTCTCAGATATGGCTAGT
ACTTCGAATAGGGTTCTGGAAGATATGAGTGACGTCAAAAGAATTAGTAACTTTTTTTACCTTCCTAAGATATTAACAAATGAAAACTCAATTGTATATGACACA
ACCCAATTA
mRNA sequenceShow/hide mRNA sequence
TTAGTATTATTTTTTTATAGTTTGACAATTTACAACTCTCTCGATTCTCAGCTGCAAGGTCACAAATTCGATCATGTAGATCGGTTATTCTCAGATATGGCTAGT
ACTTCGAATAGGGTTCTGGAAGATATGAGTGACGTCAAAAGAATTAGTAACTTTTTTTACCTTCCTAAGATATTAACAAATGAAAACTCAATTGTATATGACACA
ACCCAATTA
Protein sequenceShow/hide protein sequence
LVLFFYSLTIYNSLDSQLQGHKFDHVDRLFSDMASTSNRVLEDMSDVKRISNFFYLPKILTNENSIVYDTTQL