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MS018090 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018090
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationscaffold621:127375..127482
RNA-Seq ExpressionMS018090
SyntenyMS018090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020253243.1 putative nuclease HARBI1 isoform X1 [Asparagus officinalis]1.7e-0580Show/hide
Query:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
        RKYYLVD GYTNMP FL+PY GE YHL+DY
Subjt:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
XP_020266015.1 uncharacterized protein LOC109841457 [Asparagus officinalis]1.7e-0580Show/hide
Query:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
        RKYYLVD GYTNMP FL+PY GE YHL+DY
Subjt:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
XP_020266099.1 protein ALP1-like [Asparagus officinalis]1.7e-0580Show/hide
Query:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
        RKYYLVD GYTNMP FL+PY GE YHL+DY
Subjt:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
XP_020271936.1 protein ALP1-like [Asparagus officinalis]1.7e-0580Show/hide
Query:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
        RKYYLVD GYTNMP FL+PY GE YHL+DY
Subjt:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
XP_021863590.1 uncharacterized protein LOC110802472 [Spinacia oleracea]3.9e-0576.67Show/hide
Query:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
        RKYYL+D GYTNMP FL+PY GE YHL DY
Subjt:  RKYYLVDFGYTNMPSFLAPYHGETYHLSDY
TrEMBL top hitse value%identityAlignment
A0A0R0L8X8 DDE Tnp4 domain-containing protein2.1e-0475.86Show/hide
Query:  KYYLVDFGYTNMPSFLAPYHGETYHLSDY
        KYYL D GYTN+PSFL+PYHGE Y L DY
Subjt:  KYYLVDFGYTNMPSFLAPYHGETYHLSDY
A0A1R3GLP1 Harbinger transposase-derived nuclease3.2e-0577.42Show/hide
Query:  IRKYYLVDFGYTNMPSFLAPYHGETYHLSDY
        I KYYLVD GYTNMP FL+PY GE YHL DY
Subjt:  IRKYYLVDFGYTNMPSFLAPYHGETYHLSDY
A0A2P6SH66 Putative harbinger transposase-derived nuclease domain-containing protein2.7e-0478.57Show/hide
Query:  YYLVDFGYTNMPSFLAPYHGETYHLSDY
        YY+VD GYTNMP FLAPY GE YHL DY
Subjt:  YYLVDFGYTNMPSFLAPYHGETYHLSDY
A0A6V7QBM8 DDE Tnp4 domain-containing protein2.7e-0470.97Show/hide
Query:  IRKYYLVDFGYTNMPSFLAPYHGETYHLSDY
        +RKYYLVDFGY N   FLAPY GE YHLS +
Subjt:  IRKYYLVDFGYTNMPSFLAPYHGETYHLSDY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)3.2e-0550Show/hide
Query:  SNGIRKYYLVDFGYTNMPSFLAPYHGETYHLSDY
        S+ +RK+YLVD G+ N  +FLAP+ G  YHL ++
Subjt:  SNGIRKYYLVDFGYTNMPSFLAPYHGETYHLSDY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATAATTCAAATGGAATAAGAAAATATTATCTAGTGGATTTTGGATATACAAACATGCCTAGTTTCTTAGCTCCATATCATGGTGAGACATATCATTTAAGCGAT
TAT
mRNA sequenceShow/hide mRNA sequence
TATAATTCAAATGGAATAAGAAAATATTATCTAGTGGATTTTGGATATACAAACATGCCTAGTTTCTTAGCTCCATATCATGGTGAGACATATCATTTAAGCGAT
TAT
Protein sequenceShow/hide protein sequence
YNSNGIRKYYLVDFGYTNMPSFLAPYHGETYHLSDY