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MS018091 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018091
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0481 protein At3g47200-like
Genome locationscaffold621:138247..138537
RNA-Seq ExpressionMS018091
SyntenyMS018091
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049543.1 UPF0481 protein [Cucumis melo var. makuwa]1.4e-2870.83Show/hide
Query:  DVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        DVK+LC +KIL  LE DE QII NLKW+R+QK +LSGTYFAG+VQKLNE PD+ +V WRRLRR P AIGV AVL +VVIF AAFF+A S+LQRRY+
Subjt:  DVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

XP_008438948.1 PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]8.8e-2869.79Show/hide
Query:  DVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        DVK+LC +KIL  LE DE QII NLKW+R+QK +LSGTYFAG+VQKLNE PD+ +V WRRLRR P AIGV A L +VVIF AAFF+A S+LQRRY+
Subjt:  DVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

XP_022138112.1 UPF0481 protein At3g47200-like [Momordica charantia]3.3e-4395.88Show/hide
Query:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        ED+KLLCGRKILINLEKDETQII NLKWMRQQKANLSGTYFAGVVQKLNEPPD+FIVWWRRLRRNPVAIGVVAV ALVVIFVAAFFSALSLLQRRYR
Subjt:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

XP_023526431.1 UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo]6.8e-2871.13Show/hide
Query:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        +DVK+L  RKILI+ E DE QII NLKWM  +K +LSGTYFAG+VQKLNE PD+ +  WR+LRRNPVAIG+VAVL +VVIFVAAFFSA S+LQRRY+
Subjt:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

XP_038880915.1 UPF0481 protein At3g47200-like [Benincasa hispida]1.7e-3175.26Show/hide
Query:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        EDVK+LC RKILI+LE DE QII NLKWMR++K +LSGTYFAG+VQKLNE PD+ +  WR LRRNPVAIGV AV  +VVIFVAAFFSA+SLLQRRY+
Subjt:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

TrEMBL top hitse value%identityAlignment
A0A0A0L821 Uncharacterized protein1.1e-2361.86Show/hide
Query:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        EDVK+LC +KIL  L+ +E QII  LKW+R+QK +LSGT+FAG+VQKL E PD+ +  WRRLR N  AI V  VL +VVIF AAFF+A S+LQRRY+
Subjt:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

A0A1S3AY98 UPF0481 protein At3g47200-like4.3e-2869.79Show/hide
Query:  DVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        DVK+LC +KIL  LE DE QII NLKW+R+QK +LSGTYFAG+VQKLNE PD+ +V WRRLRR P AIGV A L +VVIF AAFF+A S+LQRRY+
Subjt:  DVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

A0A5D3CXY5 UPF0481 protein6.6e-2970.83Show/hide
Query:  DVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        DVK+LC +KIL  LE DE QII NLKW+R+QK +LSGTYFAG+VQKLNE PD+ +V WRRLRR P AIGV AVL +VVIF AAFF+A S+LQRRY+
Subjt:  DVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

A0A6J1CA62 UPF0481 protein At3g47200-like1.6e-4395.88Show/hide
Query:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        ED+KLLCGRKILINLEKDETQII NLKWMRQQKANLSGTYFAGVVQKLNEPPD+FIVWWRRLRRNPVAIGVVAV ALVVIFVAAFFSALSLLQRRYR
Subjt:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

A0A6J1GVU1 UPF0481 protein At3g47200-like2.3e-2668.04Show/hide
Query:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR
        +DVK+L  RKIL + E DE QII NLKWM  ++ +LSGTYFAG+VQKLNE PD+ +  WR+LRR PVAIG+VAVL +VVIFVAAFFSA S+LQRRY+
Subjt:  EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGACGTGAAGCTGCTCTGTGGACGAAAAATCCTGATCAATCTAGAGAAGGATGAGACGCAGATTATCGGGAATCTGAAATGGATGAGGCAGCAGAAGGCGAAC
TTGTCGGGAACGTACTTCGCCGGCGTTGTTCAGAAATTAAACGAGCCGCCGGACCAATTCATAGTGTGGTGGCGGAGGCTGAGAAGAAATCCGGTGGCCATCGGC
GTCGTCGCAGTTTTGGCGTTGGTTGTGATCTTCGTGGCGGCCTTCTTCTCCGCACTTTCTCTCCTTCAGCGCCGTTACAGG
mRNA sequenceShow/hide mRNA sequence
GAGGACGTGAAGCTGCTCTGTGGACGAAAAATCCTGATCAATCTAGAGAAGGATGAGACGCAGATTATCGGGAATCTGAAATGGATGAGGCAGCAGAAGGCGAAC
TTGTCGGGAACGTACTTCGCCGGCGTTGTTCAGAAATTAAACGAGCCGCCGGACCAATTCATAGTGTGGTGGCGGAGGCTGAGAAGAAATCCGGTGGCCATCGGC
GTCGTCGCAGTTTTGGCGTTGGTTGTGATCTTCGTGGCGGCCTTCTTCTCCGCACTTTCTCTCCTTCAGCGCCGTTACAGG
Protein sequenceShow/hide protein sequence
EDVKLLCGRKILINLEKDETQIIGNLKWMRQQKANLSGTYFAGVVQKLNEPPDQFIVWWRRLRRNPVAIGVVAVLALVVIFVAAFFSALSLLQRRYR