; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018094 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018094
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationscaffold461:21086..21559
RNA-Seq ExpressionMS018094
SyntenyMS018094
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646554.1 hypothetical protein Csa_005160 [Cucumis sativus]1.6e-3958.43Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRP--SLSPARSY------HRLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELN
        M+KLR  KLRKRLILFS+W GR IRP  SLS  R Y      + L  P+     L+W R   F +Q  +   +    VPKGQLAVYVG+S     GG L+
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRP--SLSPARSY------HRLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELN

Query:  RVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        RV+VPVVY KHR F+ELLREAEEEYGF HE+GITLPCG+SEF+ I+T+IRDCRRS  R R SG+CC
Subjt:  RVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

KAG6575207.1 Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3657.58Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLG----LPRPK--PNFLNWSRIFPFGKQI-PTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR
        MRKLRG KLRKRL+LFS+W+ R IR    PA  Y+RL      P+PK     L+WSR   F ++  P    R  +PVPKGQLAVYVG+S     GGE +R
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLG----LPRPK--PNFLNWSRIFPFGKQI-PTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR

Query:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        V+VPVVY KHR F+ELLREAE+EYGF H++GIT PCG+SEF+ I TRIRDC    R  R SG+CC
Subjt:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

XP_008458152.1 PREDICTED: auxin-responsive protein SAUR36-like [Cucumis melo]5.6e-4060Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRP--SLSPARSYH-----RLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR
        M+KLR  KLRKRLILFS+W GR IRP  SLS AR Y       L  P+     L+W R   F +Q    S  +PD VPKGQLAVYVG+S     GG L+R
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRP--SLSPARSYH-----RLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR

Query:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        V+VPVVY KH+ F+ELLREAEEEYGF HE+GITLPCG+SEF+ I+T+IRDC RS  R R SG+CC
Subjt:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

XP_022959278.1 auxin-responsive protein SAUR36-like [Cucurbita moschata]1.1e-3556.36Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPKP------NFLNWSRIFPFGKQI-PTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR
        MRKLRG KLRKRL+LFS+W+ R IR    PA  Y+RL      P        L+WSR   F ++  P    R  +PVPKGQLAVYVG+S     GGE +R
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPKP------NFLNWSRIFPFGKQI-PTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR

Query:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        V+VPVVY KHR F+ELLREAE+EYGF H++GIT PCG+SEF+ I TRIRDC    R  R SG+CC
Subjt:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

XP_038875651.1 auxin-responsive protein SAUR36-like [Benincasa hispida]7.9e-4260.24Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIR--PSLSPARSYHRLG------LPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELN
        MRK RG+KLRKRLILFS+W+GR IR   SLS  R Y+RL         +     L+W R   F +Q  +G  + PDPVPKGQLAVYVG+S     GGE +
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIR--PSLSPARSYHRLG------LPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELN

Query:  RVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        RV+VPVVY KH+ F+ELLREAEEEYGF HE+GITLPCG+SEF+ IRT+I++CRRS RR R SG+CC
Subjt:  RVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

TrEMBL top hitse value%identityAlignment
A0A0A0K7J7 Uncharacterized protein7.9e-4058.43Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRP--SLSPARSY------HRLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELN
        M+KLR  KLRKRLILFS+W GR IRP  SLS  R Y      + L  P+     L+W R   F +Q  +   +    VPKGQLAVYVG+S     GG L+
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRP--SLSPARSY------HRLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELN

Query:  RVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        RV+VPVVY KHR F+ELLREAEEEYGF HE+GITLPCG+SEF+ I+T+IRDCRRS  R R SG+CC
Subjt:  RVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

A0A1S3C755 auxin-responsive protein SAUR36-like2.7e-4060Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRP--SLSPARSYH-----RLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR
        M+KLR  KLRKRLILFS+W GR IRP  SLS AR Y       L  P+     L+W R   F +Q    S  +PD VPKGQLAVYVG+S     GG L+R
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRP--SLSPARSYH-----RLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR

Query:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        V+VPVVY KH+ F+ELLREAEEEYGF HE+GITLPCG+SEF+ I+T+IRDC RS  R R SG+CC
Subjt:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

A0A5D3CQF2 Auxin-responsive protein SAUR36-like8.8e-3157.66Show/hide
Query:  SLSPARSYH-----RLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGH
        SLS AR Y       L  P+     L+W R   F +Q    S  +PD VPKGQLAVYVG+S     GG L+RV+VPVVY KH+ F+ELLREAEEEYGF H
Subjt:  SLSPARSYH-----RLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGH

Query:  ERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        E+GITLPCG+SEF+ I+T+IRDC RS  R R SG+CC
Subjt:  ERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

A0A6J1H5H7 auxin-responsive protein SAUR36-like5.3e-3656.36Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPKP------NFLNWSRIFPFGKQI-PTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR
        MRKLRG KLRKRL+LFS+W+ R IR    PA  Y+RL      P        L+WSR   F ++  P    R  +PVPKGQLAVYVG+S     GGE +R
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPKP------NFLNWSRIFPFGKQI-PTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNR

Query:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        V+VPVVY KHR F+ELLREAE+EYGF H++GIT PCG+SEF+ I TRIRDC    R  R SG+CC
Subjt:  VVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

A0A6J1L2T6 auxin-responsive protein SAUR36-like5.9e-3555Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPK--PNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNRVVVPV
        MRKLRG KLRKR +LFS+W+ R IRP+    R       P PK     L+W R   F ++       + +PVPKGQLAVYVG+S     GGE +RV+VPV
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPK--PNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNRVVVPV

Query:  VYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        VY KHR F+ELLREAE+EYGF H++GIT PCG+SEF+ I TRIRDC    R  R SG+CC
Subjt:  VYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR365.1e-2038.82Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLG----LPRPKPNFLNWSRIF--PFGKQIPTGSS------REPDPVPKGQLAVYVGKSEAEGEG
        MRK+ G ++ +R+   S+W+ RK R   S     H       L RP     +W +     F ++    S+      ++ DPVP+G LA+YVG+ +     
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLG----LPRPKPNFLNWSRIF--PFGKQIPTGSS------REPDPVPKGQLAVYVGKSEAEGEG

Query:  GELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        G+ +RV+VP+VY  H  F ELLREAE+EYGF HE GIT+PC +S+F+ ++TRI     SS R  P G  C
Subjt:  GELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

O65695 Auxin-responsive protein SAUR507.4e-1143.42Show/hide
Query:  PDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIR
        P  VPKG   VYVG++         +R +VP+ +L H  F  LL+ AEEE+GF H+ G+T+PC    FQT+ + IR
Subjt:  PDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIR

P0DKL1 Auxin-responsive protein SAUR501.8e-0941.25Show/hide
Query:  FGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEF
        FGK      S  P+ VPKG   VYVG+          NR +VP+  L H  F +LL+ +EEE+GF H+ GI +PC   +F
Subjt:  FGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEF

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 102.4e-0940.79Show/hide
Query:  PDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIR
        P  VPKG   VYVG +         +R +VP+ +L H  F  LLR AEEE+GF H+ G+T+PC    F+++ +  R
Subjt:  PDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIR

Q9ZUZ3 Auxin-responsive protein SAUR325.7e-1147.22Show/hide
Query:  VPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRI
        VPKG LA+ VG      +G E  R +VPV+Y  H  FM+LL+EAE+EYGF  +  IT+PC   EF+ ++  I
Subjt:  VPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRI

Arabidopsis top hitse value%identityAlignment
AT2G45210.1 SAUR-like auxin-responsive protein family3.7e-2138.82Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLG----LPRPKPNFLNWSRIF--PFGKQIPTGSS------REPDPVPKGQLAVYVGKSEAEGEG
        MRK+ G ++ +R+   S+W+ RK R   S     H       L RP     +W +     F ++    S+      ++ DPVP+G LA+YVG+ +     
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLG----LPRPKPNFLNWSRIF--PFGKQIPTGSS------REPDPVPKGQLAVYVGKSEAEGEG

Query:  GELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC
        G+ +RV+VP+VY  H  F ELLREAE+EYGF HE GIT+PC +S+F+ ++TRI     SS R  P G  C
Subjt:  GELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC

AT3G60690.1 SAUR-like auxin-responsive protein family7.1e-2540.24Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRP--KPNFLNWSRIFPFGKQIPTGSSR---------------------EPDPVPKGQLAV
        MRKLRG+K+R+ +   S+W+ R+I+   S    Y RL   RP  KP  +  +++  +G+ + + S+R                     +PDPVPKG  AV
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRP--KPNFLNWSRIFPFGKQIPTGSSR---------------------EPDPVPKGQLAV

Query:  YVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRI
        Y+GK +     G+  RV+VP+VY  H  F ELLREAEEE+GF  E GIT+PC +S+F+ ++TRI
Subjt:  YVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRI

AT4G12410.1 SAUR-like auxin-responsive protein family3.3e-1433.76Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPS--LSPARSYHRLG--LPRPKPNFLNWSRIFPFGKQIPTGS--SREPDPVPKGQLAVYVGKSEAEGEGGELNRV
        M+++RG K+  R +   KW+ R   P+   +P      L   L R        S+  P   QI  G    +    VP+G L V+VG+S+      +  RV
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPS--LSPARSYHRLG--LPRPKPNFLNWSRIFPFGKQIPTGS--SREPDPVPKGQLAVYVGKSEAEGEGGELNRV

Query:  VVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIR---DCRRSS
        VVPV+Y  H  F ELL +AE  +GF     IT+PC  S+F+ ++ RI     CRR +
Subjt:  VVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIR---DCRRSS

AT4G22620.1 SAUR-like auxin-responsive protein family6.2e-1334.38Show/hide
Query:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPKPNFL-------NWSRIFPFGKQIPTGSSREP--DPVPKGQLAVYVGKSEAEGEGGEL
        M++LRG K+  R +   KW+ R  R      +    +  P  K   L         +R+    K   T    EP    VP+G L V+VG+S     G + 
Subjt:  MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPKPNFL-------NWSRIFPFGKQIPTGSSREP--DPVPKGQLAVYVGKSEAEGEGGEL

Query:  NRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIR---DCRRSS
         RVVVPV+Y  H  F ELL +AE  YGF     I +PC  S+F+ ++ RI     CRR S
Subjt:  NRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIR---DCRRSS

AT5G53590.1 SAUR-like auxin-responsive protein family4.8e-1346.51Show/hide
Query:  VPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSG
        VPKG +A+ VG  + E EG  L+R VVP+V+L H  F++LL+EAE+EYGF H+  IT+PCG  EF+ ++  I +    + RR   G
Subjt:  VPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELLREAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAGCTCCGAGGCTTGAAGCTCCGAAAGCGTCTGATTCTCTTCTCCAAATGGGTCGGCCGGAAAATTCGGCCGTCGCTGTCGCCGGCCAGATCATACCACAGGCT
GGGCCTGCCGAGACCGAAACCGAACTTCCTCAACTGGAGCCGGATCTTCCCGTTCGGGAAACAAATACCAACCGGGTCGAGTCGGGAGCCCGACCCGGTTCCGAAGGGTC
AGTTGGCGGTATACGTCGGGAAAAGCGAGGCCGAGGGCGAGGGCGGAGAATTGAACAGAGTGGTAGTTCCGGTGGTGTACTTGAAGCACCGGCCGTTCATGGAGCTGCTG
AGGGAGGCGGAGGAGGAATACGGGTTTGGCCATGAAAGGGGGATTACGCTGCCCTGTGGGTTTTCGGAGTTTCAGACAATCCGGACCCGGATCCGGGATTGCCGCCGGAG
CTCGCGGCGGCGGCGGCCTTCCGGAACCTGCTGC
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAGCTCCGAGGCTTGAAGCTCCGAAAGCGTCTGATTCTCTTCTCCAAATGGGTCGGCCGGAAAATTCGGCCGTCGCTGTCGCCGGCCAGATCATACCACAGGCT
GGGCCTGCCGAGACCGAAACCGAACTTCCTCAACTGGAGCCGGATCTTCCCGTTCGGGAAACAAATACCAACCGGGTCGAGTCGGGAGCCCGACCCGGTTCCGAAGGGTC
AGTTGGCGGTATACGTCGGGAAAAGCGAGGCCGAGGGCGAGGGCGGAGAATTGAACAGAGTGGTAGTTCCGGTGGTGTACTTGAAGCACCGGCCGTTCATGGAGCTGCTG
AGGGAGGCGGAGGAGGAATACGGGTTTGGCCATGAAAGGGGGATTACGCTGCCCTGTGGGTTTTCGGAGTTTCAGACAATCCGGACCCGGATCCGGGATTGCCGCCGGAG
CTCGCGGCGGCGGCGGCCTTCCGGAACCTGCTGC
Protein sequenceShow/hide protein sequence
MRKLRGLKLRKRLILFSKWVGRKIRPSLSPARSYHRLGLPRPKPNFLNWSRIFPFGKQIPTGSSREPDPVPKGQLAVYVGKSEAEGEGGELNRVVVPVVYLKHRPFMELL
REAEEEYGFGHERGITLPCGFSEFQTIRTRIRDCRRSSRRRRPSGTCC