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MS018115 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018115
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationscaffold461:379805..380089
RNA-Seq ExpressionMS018115
SyntenyMS018115
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0042973 - glucan endo-1,3-beta-D-glucosidase activity (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157636.1 glucan endo-1,3-beta-D-glucosidase-like isoform X1 [Momordica charantia]1.3e-3179.52Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        SQGQ WCV NEN GANKLQAGLEYACGVGG DCG IQ  STC+NPNTLEAH SYAFN+FYQK   A  SC+F+GAAYVVDQPP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

XP_022157637.1 glucan endo-1,3-beta-D-glucosidase-like isoform X2 [Momordica charantia]1.3e-3179.52Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        SQGQ WCV NEN GANKLQAGLEYACGVGG DCG IQ  STC+NPNTLEAH SYAFN+FYQK   A  SC+F+GAAYVVDQPP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

XP_022157639.1 glucan endo-1,3-beta-D-glucosidase-like [Momordica charantia]1.6e-2974.7Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        SQGQTWCV N N GA+KLQAGLEY CG  G DCG IQS +TCYNPNTLEAH SYAFN+FYQK+  AV SC+FNGAA +VD+PP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

XP_022158683.1 glucan endo-1,3-beta-glucosidase 13-like [Momordica charantia]3.2e-3075.9Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        S+GQTWCV NEN GA KLQAGLEYACG GG DCG IQ  STCY PNT++AH SYAFN++YQK+A A  SC+FNGAAYVVDQPP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

XP_022159039.1 glucan endo-1,3-beta-glucosidase 12-like isoform X1 [Momordica charantia]5.1e-2871.08Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        SQ Q+WCV NEN GA+KLQAGL+YACGVGG DCG IQ  S C++PNTLEAH SYAFN++YQK A A  SC+F+GAAY+V+QPP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

TrEMBL top hitse value%identityAlignment
A0A6J1DV03 (1->3)-beta-glucan endohydrolase6.2e-3279.52Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        SQGQ WCV NEN GANKLQAGLEYACGVGG DCG IQ  STC+NPNTLEAH SYAFN+FYQK   A  SC+F+GAAYVVDQPP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

A0A6J1DWT4 (1->3)-beta-glucan endohydrolase1.5e-3075.9Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        S+GQTWCV NEN GA KLQAGLEYACG GG DCG IQ  STCY PNT++AH SYAFN++YQK+A A  SC+FNGAAYVVDQPP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

A0A6J1DX18 (1->3)-beta-glucan endohydrolase7.6e-3074.7Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        SQGQTWCV N N GA+KLQAGLEY CG  G DCG IQS +TCYNPNTLEAH SYAFN+FYQK+  AV SC+FNGAA +VD+PP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

A0A6J1DXI4 (1->3)-beta-glucan endohydrolase2.5e-2871.08Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        SQ Q+WCV NEN GA+KLQAGL+YACGVGG DCG IQ  S C++PNTLEAH SYAFN++YQK A A  SC+F+GAAY+V+QPP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

A0A6J1DYS1 (1->3)-beta-glucan endohydrolase6.2e-3279.52Show/hide
Query:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        SQGQ WCV NEN GANKLQAGLEYACGVGG DCG IQ  STC+NPNTLEAH SYAFN+FYQK   A  SC+F+GAAYVVDQPP
Subjt:  SQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 13.0e-1543.75Show/hide
Query:  QTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        QT+C+  + V A  LQA L++ACG G  +C  IQ   +CY PN ++ H S+AFN++YQK   A  SC+F G A +    P
Subjt:  QTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

Q8VYE5 Glucan endo-1,3-beta-glucosidase 121.0e-1542.31Show/hide
Query:  WCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        WC+ +      +LQ  L++ACG G VDC  +Q    C+ P+T+ +H SYAFN +YQ+S  +   C+FNGA+  VD+ P
Subjt:  WCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

Q9C7U5 Glucan endo-1,3-beta-glucosidase 24.3e-1440Show/hide
Query:  QTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        QT+C   E      LQA L++ACG G +DC  I+   TCY P+ + AH +YAF+ +Y ++ +   +CNFNG A +    P
Subjt:  QTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

Q9FZ86 PLASMODESMATA CALLOSE-BINDING PROTEIN 37.4e-1447.22Show/hide
Query:  TWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAA
        TWCV  E +    LQ  L+YACG  G DCG I  +  C+NPNT+++H SYA N+F+QK   ++ +C+F G A
Subjt:  TWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAA

Q9ZU91 Glucan endo-1,3-beta-glucosidase 36.7e-1543.9Show/hide
Query:  QTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPPHK
        QT+C+  E V    LQA L++ACG G VDC  +    +CY P+ + AH +YAFN +YQK   A  SC+F G A V    P +
Subjt:  QTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPPHK

Arabidopsis top hitse value%identityAlignment
AT2G05790.1 O-Glycosyl hydrolases family 17 protein3.3e-2560.49Show/hide
Query:  GQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        G TWCV N + G  +LQ GL+YACG GG DC  IQ  + CY+P+TLEAH S+AFN++YQK   A  SC F GAAYVV QPP
Subjt:  GQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

AT2G30933.1 Carbohydrate-binding X8 domain superfamily protein3.7e-2153.75Show/hide
Query:  QTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        Q+WCV  ENV    LQA L+YACG+GG DC  IQ    CYNPN+L AH S+AFN++YQK+     SCNF+G A  +   P
Subjt:  QTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

AT4G26830.1 O-Glycosyl hydrolases family 17 protein1.2e-2458.54Show/hide
Query:  QGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP
        +G TWCV+N  V   KLQ  L+YACG GG DC  IQ  +TCY+P +LEAH SYAFN++YQK++  V +C F GAA+VV QPP
Subjt:  QGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPP

AT5G55180.1 O-Glycosyl hydrolases family 17 protein7.1e-2865.12Show/hide
Query:  GQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPPHKYHK
        GQTWCV N      KLQ GL+YACG GG DC  IQ  +TCYNP +LEAH SYAFN++YQK+A  V +CNF GAAYVV QPP KY K
Subjt:  GQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPPHKYHK

AT5G55180.2 O-Glycosyl hydrolases family 17 protein5.4e-2865.06Show/hide
Query:  GQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPPHK
        GQTWCV N      KLQ GL+YACG GG DC  IQ  +TCYNP +LEAH SYAFN++YQK+A  V +CNF GAAYVV QPP K
Subjt:  GQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPPHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTCCCAAGGTCAAACGTGGTGTGTGACCAACGAGAATGTTGGGGCAAATAAGCTCCAAGCAGGGCTAGAATATGCGTGTGGAGTGGGAGGTGTCGATTGTGGCCTGAT
CCAGTCTAGTTCCACATGCTACAATCCTAATACACTCGAGGCCCACCCTTCATACGCTTTCAACAACTTTTACCAGAAGAGTGCTCATGCGGTTAGGTCCTGCAATTTCA
ATGGAGCTGCATACGTTGTTGATCAACCTCCCCATAAGTACCATAAAAATTTCAATCGCCCCATT
mRNA sequenceShow/hide mRNA sequence
TTGTCCCAAGGTCAAACGTGGTGTGTGACCAACGAGAATGTTGGGGCAAATAAGCTCCAAGCAGGGCTAGAATATGCGTGTGGAGTGGGAGGTGTCGATTGTGGCCTGAT
CCAGTCTAGTTCCACATGCTACAATCCTAATACACTCGAGGCCCACCCTTCATACGCTTTCAACAACTTTTACCAGAAGAGTGCTCATGCGGTTAGGTCCTGCAATTTCA
ATGGAGCTGCATACGTTGTTGATCAACCTCCCCATAAGTACCATAAAAATTTCAATCGCCCCATT
Protein sequenceShow/hide protein sequence
LSQGQTWCVTNENVGANKLQAGLEYACGVGGVDCGLIQSSSTCYNPNTLEAHPSYAFNNFYQKSAHAVRSCNFNGAAYVVDQPPHKYHKNFNRPI