; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018129 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018129
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionleucine-rich repeat extensin-like protein 2
Genome locationscaffold669:154715..155101
RNA-Seq ExpressionMS018129
SyntenyMS018129
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8007888.1 hypothetical protein FH972_004447 [Carpinus fangiana]2.8e-2142.94Show/hide
Query:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAA-------------------------------T
        M+KA KKLKFWS+ K+++KT+D  YLPPPP   C C  S  + +PSAPPLPPWLD      Q+ P  A                               T
Subjt:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAA-------------------------------T

Query:  VVEAAA---SYQQYTAPNPVYGVPIVEMGSTRTRER-----SLFTDLGARLIRCFCPCLHVRE
        + +AA    SYQQY APNPVYG+P+V +G T  RER         + G  L RCFCPCL +RE
Subjt:  VVEAAA---SYQQYTAPNPVYGVPIVEMGSTRTRER-----SLFTDLGARLIRCFCPCLHVRE

KAG6601672.1 hypothetical protein SDJN03_06905, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2353.57Show/hide
Query:  MLKAA-KKLKFWSKNKKRRKTRD-SSYLPPPPPP--YCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATV---VEAAASYQQYTAPNPVYGVP-IV
        MLKAA KKLKFWS++KKR+K  D + + PPPPPP   C+C CS SAI+PSAPPLPPWLDDR       P  A +   + AA  YQQY  P+PVYGVP IV
Subjt:  MLKAA-KKLKFWSKNKKRRKTRD-SSYLPPPPPP--YCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATV---VEAAASYQQYTAPNPVYGVP-IV

Query:  EMGSTRTRERS-------LFTDLGARLIRCFCPCLHVREA
        +  S R   RS          DLG R+I CFCPC    +A
Subjt:  EMGSTRTRERS-------LFTDLGARLIRCFCPCLHVREA

XP_009355452.1 PREDICTED: extensin [Pyrus x bretschneideri]2.4e-2039.44Show/hide
Query:  MLKAAKKLKFWSKNKKRRKTRDSSYL-------PPPPPP---YCSCSCSYSAIRPSAPPLPPWLD-DRTLLLQSEPPAATVVE-----------------
        M+KA KKLKFW + KK+RKT    Y        PPPPPP   YCS S S S+ +PSAPPLPPWLD + T      PP     E                 
Subjt:  MLKAAKKLKFWSKNKKRRKTRDSSYL-------PPPPPP---YCSCSCSYSAIRPSAPPLPPWLD-DRTLLLQSEPPAATVVE-----------------

Query:  -------------AAASYQQYTAPNPVYGVPIVE---------------MGSTRTRERSLFTDLGARLIRCFCPCLHVRE
                       ASYQQYT PNPVYGVP+++                 ++ TR  +   D G RL  C CPCLH+RE
Subjt:  -------------AAASYQQYTAPNPVYGVPIVE---------------MGSTRTRERSLFTDLGARLIRCFCPCLHVRE

XP_022155153.1 uncharacterized protein LOC111022295 [Momordica charantia]1.9e-6596.9Show/hide
Query:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATVVEAAASYQQYTAPNPVYGVPIVEMGSTRTR
        MLKAAKKLKFWSK+KKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAAT VEAAASYQQYTAPNPVYG+PIVEMGS RTR
Subjt:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATVVEAAASYQQYTAPNPVYGVPIVEMGSTRTR

Query:  ERSLFTDLGARLIRCFCPCLHVREAYYLP
        ERSLFTDLGARLIRCFCPCLHVREAYYLP
Subjt:  ERSLFTDLGARLIRCFCPCLHVREAYYLP

XP_022933064.1 uncharacterized protein LOC111439771 [Cucurbita moschata]2.4e-2051.09Show/hide
Query:  MLKAA-KKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATV---VEAAASYQQYTAPNPVYGVP-IVEMG
        MLKAA KKLKFWS++KKR+K  + +   PPP   C+C CS SAI+PSAPPLPPWLDDR       P  A +   + AA  YQ Y  P+PVYGVP IV+  
Subjt:  MLKAA-KKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATV---VEAAASYQQYTAPNPVYGVP-IVEMG

Query:  STRTRERS-------LFTDLGARLIRCFCPCLHVREA
        S R   RS          +LG R+I CFCPC    EA
Subjt:  STRTRERS-------LFTDLGARLIRCFCPCLHVREA

TrEMBL top hitse value%identityAlignment
A0A540MBG6 Uncharacterized protein4.4e-2040.33Show/hide
Query:  MLKAAKKLKFWSKNKKRRKTRDSSYL-------PPPPPP---YCSCSCSYSAIRPSAPPLPPWLDDRTLL-------LQSEP----------PAATVVEA
        M+KA KKLKFW + KK+RKT    Y        PPPPPP   Y SCS S S+ +PSAPPLPPWLD            LQ  P          PA +  E 
Subjt:  MLKAAKKLKFWSKNKKRRKTRDSSYL-------PPPPPP---YCSCSCSYSAIRPSAPPLPPWLDDRTLL-------LQSEP----------PAATVVEA

Query:  A-----------------ASYQQYTAPNPVYGVPIVEMGSTR-------------TRERSLFTDLGARLIRCFCPCLHVRE
        A                 ASYQQYT PNPVYGVP+++  + R             TR  +   D G RL  C CPC  +RE
Subjt:  A-----------------ASYQQYTAPNPVYGVPIVEMGSTR-------------TRERSLFTDLGARLIRCFCPCLHVRE

A0A5N6QN08 Uncharacterized protein1.4e-2142.94Show/hide
Query:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAA-------------------------------T
        M+KA KKLKFWS+ K+++KT+D  YLPPPP   C C  S  + +PSAPPLPPWLD      Q+ P  A                               T
Subjt:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAA-------------------------------T

Query:  VVEAAA---SYQQYTAPNPVYGVPIVEMGSTRTRER-----SLFTDLGARLIRCFCPCLHVRE
        + +AA    SYQQY APNPVYG+P+V +G T  RER         + G  L RCFCPCL +RE
Subjt:  VVEAAA---SYQQYTAPNPVYGVPIVEMGSTRTRER-----SLFTDLGARLIRCFCPCLHVRE

A0A6J1DM77 uncharacterized protein LOC1110222959.0e-6696.9Show/hide
Query:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATVVEAAASYQQYTAPNPVYGVPIVEMGSTRTR
        MLKAAKKLKFWSK+KKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAAT VEAAASYQQYTAPNPVYG+PIVEMGS RTR
Subjt:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATVVEAAASYQQYTAPNPVYGVPIVEMGSTRTR

Query:  ERSLFTDLGARLIRCFCPCLHVREAYYLP
        ERSLFTDLGARLIRCFCPCLHVREAYYLP
Subjt:  ERSLFTDLGARLIRCFCPCLHVREAYYLP

A0A6J1EYP6 uncharacterized protein LOC1114397711.1e-2051.09Show/hide
Query:  MLKAA-KKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATV---VEAAASYQQYTAPNPVYGVP-IVEMG
        MLKAA KKLKFWS++KKR+K  + +   PPP   C+C CS SAI+PSAPPLPPWLDDR       P  A +   + AA  YQ Y  P+PVYGVP IV+  
Subjt:  MLKAA-KKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATV---VEAAASYQQYTAPNPVYGVP-IVEMG

Query:  STRTRERS-------LFTDLGARLIRCFCPCLHVREA
        S R   RS          +LG R+I CFCPC    EA
Subjt:  STRTRERS-------LFTDLGARLIRCFCPCLHVREA

A0A6P4PX64 uncharacterized protein LOC1084831504.4e-2042.07Show/hide
Query:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCS-------------YSAIRPSAPPLPPWL------DDRTLLLQSEP----------------
        M KA KKLKFWS+ K++RK +  +    P P +C C CS             YS ++PSAPPLPPWL      D+   L Q+E                 
Subjt:  MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCS-------------YSAIRPSAPPLPPWL------DDRTLLLQSEP----------------

Query:  PAATVVEAAA--SYQQYTAPNPVYGVPIVEMGSTRTRERSLF---TDLGARLIRCFCPCLHVRE
         +AT++ AAA  SYQQY   NPVYG P+V+    R R    F    D+  RLIRCFCPC+HVRE
Subjt:  PAATVVEAAA--SYQQYTAPNPVYGVPIVEMGSTRTRERSLF---TDLGARLIRCFCPCLHVRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24265.1 unknown protein6.9e-1034.48Show/hide
Query:  KKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSA----IRPSAPPLPPWLDDRTLLLQSEPPA-------------ATVVEAA------------AS
        KKL FWS+ K++RK        P  P +CSC  S +A    + P+APPLP W D+   L   E  +              T+VEA              S
Subjt:  KKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSA----IRPSAPPLPPWLDDRTLLLQSEPPA-------------ATVVEAA------------AS

Query:  YQQYTAPNPVYGVPIVEMGSTRTRERSLF---TDLGARLIRCFCP
        YQQY  PNP   V  VE  +T  R   +F    +L + L+RCF P
Subjt:  YQQYTAPNPVYGVPIVEMGSTRTRERSLF---TDLGARLIRCFCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAGGCCGCCAAGAAACTCAAGTTCTGGTCCAAAAACAAGAAGAGAAGGAAGACTCGCGATTCCTCCTATCTTCCTCCTCCGCCGCCGCCGTACTGTTCCTGCTC
TTGCTCTTACTCTGCGATCCGGCCCTCTGCTCCGCCGCTGCCGCCCTGGCTAGACGATCGGACTCTTCTCTTGCAATCGGAACCCCCAGCGGCCACCGTAGTTGAAGCGG
CGGCGTCGTACCAGCAATACACGGCTCCGAATCCGGTGTACGGAGTGCCGATTGTGGAAATGGGTAGCACAAGGACAAGGGAGAGATCTCTGTTCACCGATTTGGGCGCT
AGGTTGATTAGGTGCTTCTGTCCATGTCTTCACGTTCGAGAAGCTTATTACCTGCCA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAGGCCGCCAAGAAACTCAAGTTCTGGTCCAAAAACAAGAAGAGAAGGAAGACTCGCGATTCCTCCTATCTTCCTCCTCCGCCGCCGCCGTACTGTTCCTGCTC
TTGCTCTTACTCTGCGATCCGGCCCTCTGCTCCGCCGCTGCCGCCCTGGCTAGACGATCGGACTCTTCTCTTGCAATCGGAACCCCCAGCGGCCACCGTAGTTGAAGCGG
CGGCGTCGTACCAGCAATACACGGCTCCGAATCCGGTGTACGGAGTGCCGATTGTGGAAATGGGTAGCACAAGGACAAGGGAGAGATCTCTGTTCACCGATTTGGGCGCT
AGGTTGATTAGGTGCTTCTGTCCATGTCTTCACGTTCGAGAAGCTTATTACCTGCCA
Protein sequenceShow/hide protein sequence
MLKAAKKLKFWSKNKKRRKTRDSSYLPPPPPPYCSCSCSYSAIRPSAPPLPPWLDDRTLLLQSEPPAATVVEAAASYQQYTAPNPVYGVPIVEMGSTRTRERSLFTDLGA
RLIRCFCPCLHVREAYYLP