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MS018151 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018151
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description3-isopropylmalate dehydratase large subunit
Genome locationscaffold166:113377..113481
RNA-Seq ExpressionMS018151
SyntenyMS018151
Gene Ontology termsGO:0009098 - leucine biosynthetic process (biological process)
GO:0003861 - 3-isopropylmalate dehydratase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR015931 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
IPR036008 - Aconitase, iron-sulfur domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595175.1 3-isopropylmalate dehydratase large subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0785.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
XP_008465910.1 PREDICTED: 3-isopropylmalate dehydratase large subunit [Cucumis melo]1.8e-0785.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
XP_022132847.1 3-isopropylmalate dehydratase large subunit, chloroplastic [Momordica charantia]1.8e-0785.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
XP_022963044.1 3-isopropylmalate dehydratase large subunit, chloroplastic [Cucurbita moschata]1.8e-0785.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
XP_022972644.1 3-isopropylmalate dehydratase large subunit, chloroplastic [Cucurbita maxima]1.8e-0785.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
TrEMBL top hitse value%identityAlignment
A0A1S3CQ00 3-isopropylmalate dehydratase8.8e-0885.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
A0A5D3E4R8 3-isopropylmalate dehydratase8.8e-0885.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
A0A6J1BUZ5 3-isopropylmalate dehydratase8.8e-0885.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
A0A6J1HIW0 3-isopropylmalate dehydratase8.8e-0885.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
A0A6J1IC64 3-isopropylmalate dehydratase8.8e-0885.71Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFASGIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
SwissProt top hitse value%identityAlignment
O27439 Probable 3-isopropylmalate dehydratase large subunit6.1e-0662.86Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        V++GTDSHTCT GA   FA+GIG+TD   V +TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
O27668 Probable methanogen homoaconitase large subunit1.0e-0560Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        V++G DSHTCT GAF  FA+G+G TD   V +TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
P81291 Isopropylmalate/citramalate isomerase large subunit6.1e-0662.86Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        V++G DSHTCT GAF  FA+GIG+TD   V +TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
Q8TVF2 3-isopropylmalate dehydratase large subunit 13.0e-0560Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        V++G DSHTCT GA   FA+GIG+TD   V +TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
Q94AR8 3-isopropylmalate dehydratase large subunit, chloroplastic5.3e-1082.86Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFA+GIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
Arabidopsis top hitse value%identityAlignment
AT4G13430.1 isopropyl malate isomerase large subunit 13.8e-1182.86Show/hide
Query:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK
        VLLGTDSHTCT GAF QFA+GIGNTD  FVL TGK
Subjt:  VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCTGCTTGGTACAGACTCTCATACTTGTACAGTTGGTGCATTTAGTCAATTTGCTAGTGGAATTGGTAACACTGATCCAAGATTTGTACTAAGCACTGGGAAA
mRNA sequenceShow/hide mRNA sequence
GTTCTGCTTGGTACAGACTCTCATACTTGTACAGTTGGTGCATTTAGTCAATTTGCTAGTGGAATTGGTAACACTGATCCAAGATTTGTACTAAGCACTGGGAAA
Protein sequenceShow/hide protein sequence
VLLGTDSHTCTVGAFSQFASGIGNTDPRFVLSTGK