; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018195 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018195
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/LRR-repeat protein At2g43260-like
Genome locationscaffold56:442698..443805
RNA-Seq ExpressionMS018195
SyntenyMS018195
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR017451 - F-box associated interaction domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13067.1 putative F-box protein [Cucumis melo var. makuwa]3.5e-6944.56Show/hide
Query:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI---------SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSN
        K    +  K  NSE  P+ +IQ+I SK+   NL SCRLVCK+WNNLVLT    P +         S +L+ +   P  S        G +SV SFSFH  
Subjt:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI---------SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSN

Query:  F--PFASISIIDSCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVW-----YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSR
        F    +SISII++CNG L   +   +         ILNPMTNEYFK P   +         Y +G GF+ K KQYK+ R SF  ++  TLVEIF  G++ 
Subjt:  F--PFASISIIDSCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVW-----YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSR

Query:  SKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQP---FGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFS
          W  VGF  P + ++D GVYFNGGLYWVANQP       + +YRLDIE+E L +IS PQ   G    F GVF+ TL LTV  ++      VW MK++FS
Subjt:  SKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQP---FGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFS

Query:  WTKAFEVNNVSLLSLCVHNRPF------HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGGDA
        W KAF ++  S  +LC  + P        L PIKA EDGKILCLL GL+ IL++PK +  EILT   VK++K   V+ IDS NF+SL  IL G++
Subjt:  WTKAFEVNNVSLLSLCVHNRPF------HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGGDA

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]3.3e-9955.06Show/hide
Query:  MMNS---KTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSS--LFFIHISPQDSNLQGID-----MGGRSSVASFSFHSNF
        MMNS   K+M+N   E+  ELI LIFSKL FVNLPSCRLVCKAW+++VLT   HP IS S  LF  H    D NLQ +      +GG  +VA F FH +F
Subjt:  MMNS---KTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSS--LFFIHISPQDSNLQGID-----MGGRSSVASFSFHSNF

Query:  PFAS--ISIIDSCNGPLCCYLVHERTARPPREPF---ILNPMTNEYFKPPFSNA--DVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRS
          +S  ISI++ CNG LCC   H  T  PP E     ILNPMTNEYFKPP SNA  D WYYC+ FGFS KTKQYKL R  ++ +K A L+E FT GT+  
Subjt:  PFAS--ISIIDSCNGPLCCYLVHERTARPPREPF---ILNPMTNEYFKPPFSNA--DVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRS

Query:  KWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKA
        K   V   P  M+M++  VYFNG LYW+  Q    TNV+YRLDIE EEL EISFPQ G    CC +GVFN +L LT+    + +A HVW M+EDFSWTKA
Subjt:  KWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKA

Query:  FEVNNVSLLSLCVHNRPFH---LQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKKVYQIDSSNFDSLHKILGGDA
        F+   V L  + VH+R  +   LQ I+A +DGKILCL+ GL  IL+N K + +E LTY H+ IKKV++IDS NFDSLHKIL GDA
Subjt:  FEVNNVSLLSLCVHNRPFH---LQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKKVYQIDSSNFDSLHKILGGDA

XP_022154078.1 F-box/LRR-repeat protein At2g43260-like [Momordica charantia]2.8e-13597.93Show/hide
Query:  MMNSKTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI-SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNFPFASISIID
        MMNSKTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLT NSHPPI SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNFPFASISIID
Subjt:  MMNSKTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI-SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNFPFASISIID

Query:  SCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPPDMTMQD
        SCNG LCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGF PPDMTM D
Subjt:  SCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPPDMTMQD

Query:  DGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRG
        DGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRG
Subjt:  DGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRG

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]2.3e-7648.83Show/hide
Query:  MKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPIS-SSLFFIHI-SPQDSNLQGIDMG-----GRSSVASFSFHSNFPFAS--ISI
        +K  NSE+ P+++QLIFSKL F NLP+CRLV   WNNLVL+    P IS S+LFF H  S +D NL  +D+      G S+VASF+FH N    S  ISI
Subjt:  MKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPIS-SSLFFIHI-SPQDSNLQGIDMG-----GRSSVASFSFHSNFPFAS--ISI

Query:  IDSCNGPLCCYLV-HERTARPPREPFILNPMTNEYFKPPFSNA---DVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPP
        I+SC+G +   +    R    P    +LNPMTNEYFK P   +    V  Y +G GFS +TKQYKL R  +    H  +VEIF  GTS  +W PVG  P 
Subjt:  IDSCNGPLCCYLV-HERTARPPREPFILNPMTNEYFKPPFSNA---DVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPP

Query:  DMTMQDDGVYFNGGLYWVANQPF---GRTNVMYRLDIEDEELLEISFPQRGRG-CCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKAFEVNNV
         +  +  GVYFNGGLYWV  Q     G ++V+YRLD+ED++  +ISFP  G       ++GV+NDTL LT+C  DF Y  HVW M+EDFSW K F    +
Subjt:  DMTMQDDGVYFNGGLYWVANQPF---GRTNVMYRLDIEDEELLEISFPQRGRG-CCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKAFEVNNV

Query:  SLLSLCVHNRPFH------LQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGG
        +L     H+ P H      LQ IKA EDG ILCL  GLY IL++PK E  E+LT    +IKK   VYQIDS NF+SLH IL G
Subjt:  SLLSLCVHNRPFH------LQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGG

XP_038883771.1 putative F-box protein At1g60370 [Benincasa hispida]2.5e-7546.35Show/hide
Query:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDSNLQGID-----MGGRSSVASFSFHSNFPFA
        K  NS+  K+ +SE+ P+ +IQ+I SK+   NLPSCRLVCKAWNNLVLT    PP+  S   +       NL  +D     + G SSV SF+FH  F  +
Subjt:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDSNLQGID-----MGGRSSVASFSFHSNFPFA

Query:  SISIIDSCNGPLCCYLVHERTARPPREPF-ILNPMTNEYFKPPFSNADVWYYC-----FGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNP
        SISII+SCNG L   +   ++  P      ILNPMTNEYFK P   +     C     +G GFS +TKQYK+ R SF  ++  T VEIF  GT+R +W P
Subjt:  SISIIDSCNGPLCCYLVHERTARPPREPF-ILNPMTNEYFKPPFSNADVWYYC-----FGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNP

Query:  VGFPPPDMTMQDDGVYFNGGLYWVAN--QPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKAFE
        VG   P + ++D GVYFNGGLYW  +  QP    N +YRLDIE+E+L +IS P  G G    F GVF+ TL LT  T        VW M+E+ SW KAF 
Subjt:  VGFPPPDMTMQDDGVYFNGGLYWVAN--QPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKAFE

Query:  VNNVSLLSLCVHNRPF---HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGG
        ++    L    H++P+    LQPIK  EDGKILCLL G   IL++PK + ++ILT   V+ ++   V+QIDSSNF+SL  IL G
Subjt:  VNNVSLLSLCVHNRPF---HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGG

TrEMBL top hitse value%identityAlignment
A0A0A0KJY9 F-box domain-containing protein2.2e-6944.1Show/hide
Query:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDS----NLQGIDMGGRSSVASFSFHSNFPF--
        K    +  K  NSE  P+ +IQ+I SK+   NL SCRLVCK+WNNL+LT    P  S  L F +  P  +    +   +   G +S+ SF+FH  F    
Subjt:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDS----NLQGIDMGGRSSVASFSFHSNFPF--

Query:  ASISIIDSCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVW-----YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNP
        +SISII++CNG L   +   +         ILNPMTNEYFK P   +         Y +G GF+ KTKQYK+ R SF  ++  TLVEIFT G++   W P
Subjt:  ASISIIDSCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVW-----YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNP

Query:  VGFPPPDMTMQDDGVYFNGGLYWVANQP---FGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKAF
        VGF  P + ++D GVYF GGLYWVANQP       + +YRLD+E+E+L +IS PQ   G    F GVF+ TL LTV  ++      VW MK++FSW KAF
Subjt:  VGFPPPDMTMQDDGVYFNGGLYWVANQP---FGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKAF

Query:  EVNNVSLLSLCVHNRPF------HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGGDA
         ++     +LC  + P        L PIKA EDGKILCLL GL+ IL++PK +  EILT   VK++K   V+ ID+ NF+SL  IL G++
Subjt:  EVNNVSLLSLCVHNRPF------HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGGDA

A0A1S3B0Q6 putative F-box protein At3g211203.8e-6944.56Show/hide
Query:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI---------SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSN
        K    +  K  NSE  P+ +IQ+I SK+   NL SCRLVCK+WNNLVLT    P +         S +L+ +   P  S        G +SV SFSFH  
Subjt:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI---------SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSN

Query:  F--PFASISIIDSCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVW-----YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSR
        F    +SISII++CNG L   +   +         ILNPMTNEYFK P   +         Y +G GF+ K KQYK+ R SF  ++  TLVEIF  G+  
Subjt:  F--PFASISIIDSCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVW-----YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSR

Query:  SKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQP---FGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFS
          W  VGF  P + ++D GVYFNGGLYWVANQP       + +YRLDIE+E L +IS PQ   G    F GVF+ TL LTV  ++      VW MK++FS
Subjt:  SKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQP---FGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFS

Query:  WTKAFEVNNVSLLSLCVHNRPF------HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGGDA
        W KAF ++  S  +LC  + P        L PIKA EDGKILCLL GL+ IL++PK +  EILT   VK++K   V+ IDS NF+SL  IL G++
Subjt:  WTKAFEVNNVSLLSLCVHNRPF------HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGGDA

A0A5D3CM94 Putative F-box protein1.7e-6944.56Show/hide
Query:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI---------SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSN
        K    +  K  NSE  P+ +IQ+I SK+   NL SCRLVCK+WNNLVLT    P +         S +L+ +   P  S        G +SV SFSFH  
Subjt:  KMMNSKTMKNINSEVLPE-LIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI---------SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSN

Query:  F--PFASISIIDSCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVW-----YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSR
        F    +SISII++CNG L   +   +         ILNPMTNEYFK P   +         Y +G GF+ K KQYK+ R SF  ++  TLVEIF  G++ 
Subjt:  F--PFASISIIDSCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVW-----YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSR

Query:  SKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQP---FGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFS
          W  VGF  P + ++D GVYFNGGLYWVANQP       + +YRLDIE+E L +IS PQ   G    F GVF+ TL LTV  ++      VW MK++FS
Subjt:  SKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQP---FGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFS

Query:  WTKAFEVNNVSLLSLCVHNRPF------HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGGDA
        W KAF ++  S  +LC  + P        L PIKA EDGKILCLL GL+ IL++PK +  EILT   VK++K   V+ IDS NF+SL  IL G++
Subjt:  WTKAFEVNNVSLLSLCVHNRPF------HLQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKK---VYQIDSSNFDSLHKILGGDA

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like1.6e-9955.06Show/hide
Query:  MMNS---KTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSS--LFFIHISPQDSNLQGID-----MGGRSSVASFSFHSNF
        MMNS   K+M+N   E+  ELI LIFSKL FVNLPSCRLVCKAW+++VLT   HP IS S  LF  H    D NLQ +      +GG  +VA F FH +F
Subjt:  MMNS---KTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSS--LFFIHISPQDSNLQGID-----MGGRSSVASFSFHSNF

Query:  PFAS--ISIIDSCNGPLCCYLVHERTARPPREPF---ILNPMTNEYFKPPFSNA--DVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRS
          +S  ISI++ CNG LCC   H  T  PP E     ILNPMTNEYFKPP SNA  D WYYC+ FGFS KTKQYKL R  ++ +K A L+E FT GT+  
Subjt:  PFAS--ISIIDSCNGPLCCYLVHERTARPPREPF---ILNPMTNEYFKPPFSNA--DVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRS

Query:  KWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKA
        K   V   P  M+M++  VYFNG LYW+  Q    TNV+YRLDIE EEL EISFPQ G    CC +GVFN +L LT+    + +A HVW M+EDFSWTKA
Subjt:  KWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKA

Query:  FEVNNVSLLSLCVHNRPFH---LQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKKVYQIDSSNFDSLHKILGGDA
        F+   V L  + VH+R  +   LQ I+A +DGKILCL+ GL  IL+N K + +E LTY H+ IKKV++IDS NFDSLHKIL GDA
Subjt:  FEVNNVSLLSLCVHNRPFH---LQPIKAGEDGKILCLLDGLYFILHNPKLEMLEILTYHHVKIKKVYQIDSSNFDSLHKILGGDA

A0A6J1DJA3 F-box/LRR-repeat protein At2g43260-like1.4e-13597.93Show/hide
Query:  MMNSKTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI-SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNFPFASISIID
        MMNSKTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLT NSHPPI SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNFPFASISIID
Subjt:  MMNSKTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPI-SSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNFPFASISIID

Query:  SCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPPDMTMQD
        SCNG LCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGF PPDMTM D
Subjt:  SCNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPPDMTMQD

Query:  DGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRG
        DGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRG
Subjt:  DGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRG

SwissProt top hitse value%identityAlignment
Q8S8Q9 F-box/LRR-repeat protein At2g432602.1e-0824.28Show/hide
Query:  KNINS-EVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDSNLQ-----GIDMGGRSSVASFS-FHSNFPFASISIIDS
        +N NS ++LPEL++ +  +L   ++  CR+V K W +L+         SS     H+S Q+S  +       D GGR  +   S F  +     +    S
Subjt:  KNINS-EVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDSNLQ-----GIDMGGRSSVASFS-FHSNFPFASISIIDS

Query:  -----CNGPLCCYLVHERTARPPREPFI--LNPMTNEYFKPPFS-------NADVW------YYCFGFGFSLKTKQYKLTRLSFAW---EKHATLVEIFT
             C G +C           P + +I  LNP T++  + P            +W       +  GFG      +YK+ R+SFA+    +   +VE   
Subjt:  -----CNGPLCCYLVHERTARPPREPFI--LNPMTNEYFKPPFS-------NADVW------YYCFGFGFSLKTKQYKLTRLSFAW---EKHATLVEIFT

Query:  LGTSRSKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMM---
        L     +W  +  PP  + +    V  NG +YW+  Q   R   +  LD+  EE  ++  P          V +  D L L +      +   VW M   
Subjt:  LGTSRSKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMM---

Query:  KEDFSWTKAFEVN
        KE   W+K + ++
Subjt:  KEDFSWTKAFEVN

Q9SI34 Putative F-box only protein 93.1e-0724.2Show/hide
Query:  SEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRN-------SHPPISSSLFF--IHISPQDSNL--QGIDMGGRSSVASFSFHSNFPFASISIIDS
        S++ P+L++ I S++   +L   R  CK WN+L   R          P  S  L +    + P   NL   G  +  +S ++    H N     I+ +  
Subjt:  SEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRN-------SHPPISSSLFF--IHISPQDSNL--QGIDMGGRSSVASFSFHSNFPFASISIIDS

Query:  CNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGF--SLKTKQYKLTRL--SFAWEKHATL---VEIFTLGTSRSKWNPVGFPPP
        C+G L C     R         + NP   E     F N    Y  F  G+  +   + YK+ R   S+    H  L   +  FT  + R   + V     
Subjt:  CNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGF--SLKTKQYKLTRL--SFAWEKHATL---VEIFTLGTSRSKWNPVGFPPP

Query:  DMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYAN-HVWM-----MKEDFSWTKAFEVN
         +   ++GV F G  YW+A      TN +   D   E    +  P   + C    + V  +   L+V   +F  +   +WM      +   SW + F V 
Subjt:  DMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYAN-HVWM-----MKEDFSWTKAFEVN

Query:  NVSLLSLCVHNRPF
           +LS+C H+ PF
Subjt:  NVSLLSLCVHNRPF

Arabidopsis top hitse value%identityAlignment
AT2G02660.1 F-box associated ubiquitination effector family protein2.9e-0535.11Show/hide
Query:  PFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQ
        P I NP T  Y   P        Y F FGF    KQYK   LS A+       +I TLG     W  +  P P   ++ DG+  NG LY++A +
Subjt:  PFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQ

AT2G04920.1 F-box and associated interaction domains-containing protein2.2e-0824.2Show/hide
Query:  SEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRN-------SHPPISSSLFF--IHISPQDSNL--QGIDMGGRSSVASFSFHSNFPFASISIIDS
        S++ P+L++ I S++   +L   R  CK WN+L   R          P  S  L +    + P   NL   G  +  +S ++    H N     I+ +  
Subjt:  SEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRN-------SHPPISSSLFF--IHISPQDSNL--QGIDMGGRSSVASFSFHSNFPFASISIIDS

Query:  CNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGF--SLKTKQYKLTRL--SFAWEKHATL---VEIFTLGTSRSKWNPVGFPPP
        C+G L C     R         + NP   E     F N    Y  F  G+  +   + YK+ R   S+    H  L   +  FT  + R   + V     
Subjt:  CNGPLCCYLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGF--SLKTKQYKLTRL--SFAWEKHATL---VEIFTLGTSRSKWNPVGFPPP

Query:  DMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYAN-HVWM-----MKEDFSWTKAFEVN
         +   ++GV F G  YW+A      TN +   D   E    +  P   + C    + V  +   L+V   +F  +   +WM      +   SW + F V 
Subjt:  DMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYAN-HVWM-----MKEDFSWTKAFEVN

Query:  NVSLLSLCVHNRPF
           +LS+C H+ PF
Subjt:  NVSLLSLCVHNRPF

AT2G43260.1 F-box and associated interaction domains-containing protein1.5e-0924.28Show/hide
Query:  KNINS-EVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDSNLQ-----GIDMGGRSSVASFS-FHSNFPFASISIIDS
        +N NS ++LPEL++ +  +L   ++  CR+V K W +L+         SS     H+S Q+S  +       D GGR  +   S F  +     +    S
Subjt:  KNINS-EVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDSNLQ-----GIDMGGRSSVASFS-FHSNFPFASISIIDS

Query:  -----CNGPLCCYLVHERTARPPREPFI--LNPMTNEYFKPPFS-------NADVW------YYCFGFGFSLKTKQYKLTRLSFAW---EKHATLVEIFT
             C G +C           P + +I  LNP T++  + P            +W       +  GFG      +YK+ R+SFA+    +   +VE   
Subjt:  -----CNGPLCCYLVHERTARPPREPFI--LNPMTNEYFKPPFS-------NADVW------YYCFGFGFSLKTKQYKLTRLSFAW---EKHATLVEIFT

Query:  LGTSRSKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMM---
        L     +W  +  PP  + +    V  NG +YW+  Q   R   +  LD+  EE  ++  P          V +  D L L +      +   VW M   
Subjt:  LGTSRSKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMM---

Query:  KEDFSWTKAFEVN
        KE   W+K + ++
Subjt:  KEDFSWTKAFEVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAGTAAGATGATGAATTCGAAGACAATGAAGAACATCAATTCGGAGGTTTTACCAGAACTGATTCAGTTGATATTCTCGAAACTTTCCTTTGTGAACTTACCCAGTTG
CAGGCTCGTTTGTAAAGCATGGAACAATCTGGTTTTAACTCGTAACTCCCATCCTCCCATCTCTTCCAGCCTCTTTTTTATCCATATTTCTCCGCAGGATAGCAATCTCC
AAGGCATAGACATGGGAGGGAGGAGCAGTGTTGCCTCGTTTAGCTTCCATTCTAATTTCCCCTTTGCCAGTATCTCTATTATCGATTCATGTAATGGACCCCTCTGTTGT
TATCTTGTCCATGAAAGAACCGCAAGGCCACCTCGTGAACCTTTCATATTAAATCCCATGACAAATGAGTACTTTAAACCTCCCTTCTCGAATGCAGATGTTTGGTATTA
TTGTTTCGGATTTGGGTTTAGTCTCAAGACAAAGCAGTACAAATTAACAAGACTCTCCTTTGCTTGGGAGAAACATGCTACCTTGGTGGAGATTTTCACACTTGGCACAA
GTCGCAGCAAATGGAACCCCGTTGGCTTTCCGCCTCCAGACATGACAATGCAAGACGATGGTGTTTACTTCAATGGAGGCCTTTATTGGGTTGCAAATCAACCATTTGGC
CGTACCAATGTCATGTACCGTTTAGATATAGAAGATGAGGAATTGCTGGAAATTTCTTTTCCCCAACGTGGCCGTGGGTGTTGTTGTTGTTTCGTTGGAGTCTTTAACGA
CACTCTCTGTTTAACCGTGTGTACCTCAGATTTTGGTTATGCGAACCATGTGTGGATGATGAAAGAAGATTTTTCATGGACTAAAGCATTTGAGGTTAACAATGTATCGC
TATTGTCTTTGTGTGTGCATAATCGACCATTTCATCTTCAACCTATTAAAGCTGGTGAAGATGGAAAGATCTTGTGTCTTCTTGATGGACTCTATTTTATTTTACATAAT
CCTAAGCTGGAGATGTTGGAGATATTGACATATCACCATGTCAAAATTAAGAAAGTTTATCAGATTGACTCCTCCAATTTTGATTCTCTCCACAAGATTTTAGGAGGGGA
TGCT
mRNA sequenceShow/hide mRNA sequence
AAGAGTAAGATGATGAATTCGAAGACAATGAAGAACATCAATTCGGAGGTTTTACCAGAACTGATTCAGTTGATATTCTCGAAACTTTCCTTTGTGAACTTACCCAGTTG
CAGGCTCGTTTGTAAAGCATGGAACAATCTGGTTTTAACTCGTAACTCCCATCCTCCCATCTCTTCCAGCCTCTTTTTTATCCATATTTCTCCGCAGGATAGCAATCTCC
AAGGCATAGACATGGGAGGGAGGAGCAGTGTTGCCTCGTTTAGCTTCCATTCTAATTTCCCCTTTGCCAGTATCTCTATTATCGATTCATGTAATGGACCCCTCTGTTGT
TATCTTGTCCATGAAAGAACCGCAAGGCCACCTCGTGAACCTTTCATATTAAATCCCATGACAAATGAGTACTTTAAACCTCCCTTCTCGAATGCAGATGTTTGGTATTA
TTGTTTCGGATTTGGGTTTAGTCTCAAGACAAAGCAGTACAAATTAACAAGACTCTCCTTTGCTTGGGAGAAACATGCTACCTTGGTGGAGATTTTCACACTTGGCACAA
GTCGCAGCAAATGGAACCCCGTTGGCTTTCCGCCTCCAGACATGACAATGCAAGACGATGGTGTTTACTTCAATGGAGGCCTTTATTGGGTTGCAAATCAACCATTTGGC
CGTACCAATGTCATGTACCGTTTAGATATAGAAGATGAGGAATTGCTGGAAATTTCTTTTCCCCAACGTGGCCGTGGGTGTTGTTGTTGTTTCGTTGGAGTCTTTAACGA
CACTCTCTGTTTAACCGTGTGTACCTCAGATTTTGGTTATGCGAACCATGTGTGGATGATGAAAGAAGATTTTTCATGGACTAAAGCATTTGAGGTTAACAATGTATCGC
TATTGTCTTTGTGTGTGCATAATCGACCATTTCATCTTCAACCTATTAAAGCTGGTGAAGATGGAAAGATCTTGTGTCTTCTTGATGGACTCTATTTTATTTTACATAAT
CCTAAGCTGGAGATGTTGGAGATATTGACATATCACCATGTCAAAATTAAGAAAGTTTATCAGATTGACTCCTCCAATTTTGATTCTCTCCACAAGATTTTAGGAGGGGA
TGCT
Protein sequenceShow/hide protein sequence
KSKMMNSKTMKNINSEVLPELIQLIFSKLSFVNLPSCRLVCKAWNNLVLTRNSHPPISSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNFPFASISIIDSCNGPLCC
YLVHERTARPPREPFILNPMTNEYFKPPFSNADVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFPPPDMTMQDDGVYFNGGLYWVANQPFG
RTNVMYRLDIEDEELLEISFPQRGRGCCCCFVGVFNDTLCLTVCTSDFGYANHVWMMKEDFSWTKAFEVNNVSLLSLCVHNRPFHLQPIKAGEDGKILCLLDGLYFILHN
PKLEMLEILTYHHVKIKKVYQIDSSNFDSLHKILGGDA