; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018196 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018196
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold56:457520..458620
RNA-Seq ExpressionMS018196
SyntenyMS018196
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR011043 - Galactose oxidase/kelch, beta-propeller
IPR017451 - F-box associated interaction domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13067.1 putative F-box protein [Cucumis melo var. makuwa]6.0e-9353.3Show/hide
Query:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDP--KQGMSSVASFSFHP--
        MEKK K  I    NSE P P  +I++IL K+P  NL SCRLVCK WNNLVLTCKFD  + IS    A+  P R L+CVD DP   +GM+SV SFSFHP  
Subjt:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDP--KQGMSSVASFSFHP--

Query:  DLSSTNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFG
          SS++ISIIN CNGLL     + +P          + ILNPMTNEYFK P   +       RLY YG GF+PK K YK+AR SF  D+   LVEIFAFG
Subjt:  DLSSTNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFG

Query:  -TNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKV--IYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDF
         T   WT VGF+P L+  +DHGVYF+GGLYWV N     D+ +  IYRLDIE+E    ++I  P +  G    GVF+ TLYLT+S  +  Y VWKM+++F
Subjt:  -TNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKV--IYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDF

Query:  SWIKAF------DVLLPEH-HRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA
        SWIKAF      ++  P+H H+P     L  I+ACEDGKILCLLAGL+LILY+P+TK  E+LT+Q  +V+K   VH IDSFNFNSL  ILAGN+
Subjt:  SWIKAF------DVLLPEH-HRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA

XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]8.3e-9552.94Show/hide
Query:  MEKKRKSNI-NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFR--KLHCVDLDPK--QGMSSVASFSFHPDLS
        MEKK K+NI N    LPP++++LI  KLP  NLP+CRLV   WNNL+ +CKFD  ISIS LFFA     R   LHCV+ DP+  +GMS+VASF+FHPDLS
Subjt:  MEKKRKSNI-NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFR--KLHCVDLDPK--QGMSSVASFSFHPDLS

Query:  --STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNA--DRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTN
          S  I+IIN C+GL+    ++ R     L     V +LNP+TNEYFK P S +  DRV   Y YG GFSP T  YKLAR  F +D+F  +V+IFAFGT+
Subjt:  --STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNA--DRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTN

Query:  GKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPD------TKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEED
         +WT VG VP  +  + HGVY +GGLYWVG+  + P+      T+VIYRLD++DE  KF++I  P  G     I V+N TLYLT    D  YH WKMEED
Subjt:  GKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPD------TKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEED

Query:  FSWIKAFDVLLPEH------HRPC--HLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAG
        FSW K F + LPE+      H P   +LQLI+ CEDG ILCL AG+ LILY+P T+  E+LTNQD E+K+   VH+I+SF+FNSL  ILAG
Subjt:  FSWIKAFDVLLPEH------HRPC--HLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAG

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]7.8e-10961.21Show/hide
Query:  KKRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISS-LFFAHISPF-RKLHCVDLDPKQ--GMSSVASFSFHPD--LSS
        KKRKS  N    +P ELI LI  KLP VNLPSCRLVCK W+++VLT K    ISIS+ LF AH   F   L C+ LDPK   GM +VA F FHPD  LSS
Subjt:  KKRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISS-LFFAHISPF-RKLHCVDLDPKQ--GMSSVASFSFHPD--LSS

Query:  TNISIINFCNGLLCCYFDRGRPTKTLLPCEG-EVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGKWT
        T ISI+NFCNGLLCC F+  R TK + P E  EV ILNPMTNEYFKPPISNA +    Y Y FGFSPKTK YKL R  ++ DK AIL+E F FGTN K T
Subjt:  TNISIINFCNGLLCCYFDRGRPTKTLLPCEG-EVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGKWT

Query:  HVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDV-GYHVWKMEEDFSWIKAFDV
        +V  VP  +  ++H VYF+G LYW+G  L+ P T V+YRLDIE EE   QEI  P  G G C IGVFN +LYLTL+      YHVWKMEEDFSW KAFDV
Subjt:  HVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDV-GYHVWKMEEDFSWIKAFDV

Query:  LLPE---HHRPCH---LQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKKVHRIDSFNFNSLTKILAGNA
        LLP+   HHR  +   LQLIRAC+DGKILCL++GL LILYN +T+R E LT Q   +KKVHRIDSFNF+SL KIL G+A
Subjt:  LLPE---HHRPCH---LQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKKVHRIDSFNFNSLTKILAGNA

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]3.5e-10156.49Show/hide
Query:  MEKKRKSNI---NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPF--RKLHCVDLDPK--QGMSSVASFSFHPD
        MEKK KS I   NSE  LPP++++LI  KLP  NLP+CRLV   WNNLVL+CKFD  ISIS+LFFAH      R LHCVDLDP+  +GMS+VASF+FHP+
Subjt:  MEKKRKSNI---NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPF--RKLHCVDLDPK--QGMSSVASFSFHPD

Query:  LS--STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFK-PPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGT
        +S  S  ISIIN C+GL+     + R         G V +LNPMTNEYFK P   +    ++ Y YG GFSP+TK YKLAR  +   +F  +VEIFAFGT
Subjt:  LS--STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFK-PPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGT

Query:  NGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPD---TKVIYRLDIEDEEFKFQEIFIPHYGEGS---CIIGVFNDTLYLTLSIPDVGYHVWKMEE
        + +WT VG VP  +  + HGVYF+GGLYWVG   + P+   + VIYRLD+ED+  KF++I  P  G+       IGV+NDTLYLTL   D  YHVWKMEE
Subjt:  NGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPD---TKVIYRLDIEDEEFKFQEIFIPHYGEGS---CIIGVFNDTLYLTLSIPDVGYHVWKMEE

Query:  DFSWIKAFDVLLPE---HHRPCH------LQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAG
        DFSWIK F + LPE   H  P H      LQLI+ACEDG ILCL AGLYLILY+P+T+ TELLT+QD E+KK   V++IDSFNFNSL  ILAG
Subjt:  DFSWIKAFDVLLPE---HHRPCH------LQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAG

XP_038883771.1 putative F-box protein At1g60370 [Benincasa hispida]1.9e-9954.22Show/hide
Query:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDPK--QGMSSVASFSFHPDL
        MEKKR S I    +SELP P  +I++IL K+P  NLPSCRLVCK WNNLVLTCKFD P+ ISSL  A+  P R L+C+D + K  +GMSSV SF+FHP  
Subjt:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDPK--QGMSSVASFSFHPDL

Query:  SSTNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTN
         +++ISIIN CNGLL     +    K+  P    + ILNPMTNEYFK P   +       R Y YG GFSP+TK YK+AR SF  D+    VEIFAFGT 
Subjt:  SSTNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTN

Query:  GKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDT-KVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVG--YHVWKMEEDFSW
         +WT VG +P L+  +DHGVYF+GGLYW  ++L+  D+   IYRLDIE+E  K ++I  PHYG G    GVF+ TLYLT     V   Y VWKMEE+ SW
Subjt:  GKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDT-KVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVG--YHVWKMEEDFSW

Query:  IKAF------DVLLPEHHRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA
        IKAF      ++  PEH +P     LQ I+ CEDGKILCLLAG  LILY+P+TKR ++LTNQD E ++   VH+IDS NFNSL  ILAG +
Subjt:  IKAF------DVLLPEHHRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA

TrEMBL top hitse value%identityAlignment
A0A0A0KJY9 F-box domain-containing protein1.4e-9252.28Show/hide
Query:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDPK--QGMSSVASFSFHPDL
        MEKK K  I    NSE P P  +I++IL K+P  NL SCRLVCK WNNL+LTCKFD  + +S   FA+  P R L+CVD DP   +GM+S+ SF+FHP  
Subjt:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDPK--QGMSSVASFSFHPDL

Query:  SS--TNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFG
        S+  ++ISIIN CNGLL     +    + L      + ILNPMTNEYFK P   +       RLY YG GF+PKTK YK+AR SF  D+   LVEIF FG
Subjt:  SS--TNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFG

Query:  -TNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKV--IYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDF
         T+  WT VGF+P L+  +DHGVYF GGLYWV N     D+ +  IYRLD+E+E  K ++I  P Y  G    GVF+ TLYLT+S  +  Y VWKM+++F
Subjt:  -TNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKV--IYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDF

Query:  SWIKAF------DVLLPEH-HRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA
        SWIKAF      ++  P+H H+P     L  I+ACEDGKILCLLAGL+LILY+P+TK  E+LT+Q  +V+K   VH ID+FNFNSL  ILAGN+
Subjt:  SWIKAF------DVLLPEH-HRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA

A0A0A0M1M5 F-box domain-containing protein4.0e-9552.94Show/hide
Query:  MEKKRKSNI-NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFR--KLHCVDLDPK--QGMSSVASFSFHPDLS
        MEKK K+NI N    LPP++++LI  KLP  NLP+CRLV   WNNL+ +CKFD  ISIS LFFA     R   LHCV+ DP+  +GMS+VASF+FHPDLS
Subjt:  MEKKRKSNI-NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFR--KLHCVDLDPK--QGMSSVASFSFHPDLS

Query:  --STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNA--DRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTN
          S  I+IIN C+GL+    ++ R     L     V +LNP+TNEYFK P S +  DRV   Y YG GFSP T  YKLAR  F +D+F  +V+IFAFGT+
Subjt:  --STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNA--DRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTN

Query:  GKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPD------TKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEED
         +WT VG VP  +  + HGVY +GGLYWVG+  + P+      T+VIYRLD++DE  KF++I  P  G     I V+N TLYLT    D  YH WKMEED
Subjt:  GKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPD------TKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEED

Query:  FSWIKAFDVLLPEH------HRPC--HLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAG
        FSW K F + LPE+      H P   +LQLI+ CEDG ILCL AG+ LILY+P T+  E+LTNQD E+K+   VH+I+SF+FNSL  ILAG
Subjt:  FSWIKAFDVLLPEH------HRPC--HLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAG

A0A1S3B0Q6 putative F-box protein At3g211206.4e-9353.05Show/hide
Query:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDP--KQGMSSVASFSFHP--
        MEKK K  I    NSE P P  +I++IL K+P  NL SCRLVCK WNNLVLTCKFD  + IS    A+  P R L+CVD DP   +GM+SV SFSFHP  
Subjt:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDP--KQGMSSVASFSFHP--

Query:  DLSSTNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFG
          SS++ISIIN CNGLL     + +P          + ILNPMTNEYFK P   +       RLY YG GF+PK K YK+AR SF  D+   LVEIFAFG
Subjt:  DLSSTNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFG

Query:  TNGK-WTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKV--IYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDF
        +  + WT VGF+P L+  +DHGVYF+GGLYWV N     D+ +  IYRLDIE+E    ++I  P +  G    GVF+ TLYLT+S  +  Y VWKM+++F
Subjt:  TNGK-WTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKV--IYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDF

Query:  SWIKAF------DVLLPEH-HRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA
        SWIKAF      ++  P+H H+P     L  I+ACEDGKILCLLAGL+LILY+P+TK  E+LT+Q  +V+K   VH IDSFNFNSL  ILAGN+
Subjt:  SWIKAF------DVLLPEH-HRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA

A0A5D3CM94 Putative F-box protein2.9e-9353.3Show/hide
Query:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDP--KQGMSSVASFSFHP--
        MEKK K  I    NSE P P  +I++IL K+P  NL SCRLVCK WNNLVLTCKFD  + IS    A+  P R L+CVD DP   +GM+SV SFSFHP  
Subjt:  MEKKRKSNI----NSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDP--KQGMSSVASFSFHP--

Query:  DLSSTNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFG
          SS++ISIIN CNGLL     + +P          + ILNPMTNEYFK P   +       RLY YG GF+PK K YK+AR SF  D+   LVEIFAFG
Subjt:  DLSSTNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFG

Query:  -TNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKV--IYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDF
         T   WT VGF+P L+  +DHGVYF+GGLYWV N     D+ +  IYRLDIE+E    ++I  P +  G    GVF+ TLYLT+S  +  Y VWKM+++F
Subjt:  -TNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKV--IYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDF

Query:  SWIKAF------DVLLPEH-HRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA
        SWIKAF      ++  P+H H+P     L  I+ACEDGKILCLLAGL+LILY+P+TK  E+LT+Q  +V+K   VH IDSFNFNSL  ILAGN+
Subjt:  SWIKAF------DVLLPEH-HRP---CHLQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKK---VHRIDSFNFNSLTKILAGNA

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like3.8e-10961.21Show/hide
Query:  KKRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISS-LFFAHISPF-RKLHCVDLDPKQ--GMSSVASFSFHPD--LSS
        KKRKS  N    +P ELI LI  KLP VNLPSCRLVCK W+++VLT K    ISIS+ LF AH   F   L C+ LDPK   GM +VA F FHPD  LSS
Subjt:  KKRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISS-LFFAHISPF-RKLHCVDLDPKQ--GMSSVASFSFHPD--LSS

Query:  TNISIINFCNGLLCCYFDRGRPTKTLLPCEG-EVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGKWT
        T ISI+NFCNGLLCC F+  R TK + P E  EV ILNPMTNEYFKPPISNA +    Y Y FGFSPKTK YKL R  ++ DK AIL+E F FGTN K T
Subjt:  TNISIINFCNGLLCCYFDRGRPTKTLLPCEG-EVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGKWT

Query:  HVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDV-GYHVWKMEEDFSWIKAFDV
        +V  VP  +  ++H VYF+G LYW+G  L+ P T V+YRLDIE EE   QEI  P  G G C IGVFN +LYLTL+      YHVWKMEEDFSW KAFDV
Subjt:  HVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDV-GYHVWKMEEDFSWIKAFDV

Query:  LLPE---HHRPCH---LQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKKVHRIDSFNFNSLTKILAGNA
        LLP+   HHR  +   LQLIRAC+DGKILCL++GL LILYN +T+R E LT Q   +KKVHRIDSFNF+SL KIL G+A
Subjt:  LLPE---HHRPCH---LQLIRACEDGKILCLLAGLYLILYNPETKRTELLTNQDAEVKKVHRIDSFNFNSLTKILAGNA

SwissProt top hitse value%identityAlignment
Q8GXC7 F-box/kelch-repeat protein At3g062404.6e-1127.24Show/hide
Query:  ISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTN------EYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARL-------------SFAYDKF
        + I+   NGL+C           + P EG VF+ NP T       E F+P     +R      YGFGF   T  YKL +L             S   D +
Subjt:  ISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTN------EYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARL-------------SFAYDKF

Query:  AILVEIFAFGTNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGE------GSCIIGVFNDTLYLTLSIP
          +  +     +G +T              GV+F+G ++WV  + R  + +V+   DI+ EEF+  E+ +P   E       + ++G  N  L +  S  
Subjt:  AILVEIFAFGTNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGE------GSCIIGVFNDTLYLTLSIP

Query:  DVGYHVWKME---EDFSWIKAFDVLLPEHHRPCHLQLIRACEDGKILCLLAGLYLILYNPETKRTELL
        DV   +W M    E  SW +    LL    +P    L     D ++L  L G  L+LYN ET  +  L
Subjt:  DVGYHVWKME---EDFSWIKAFDVLLPEHHRPCHLQLIRACEDGKILCLLAGLYLILYNPETKRTELL

Q8S8Q9 F-box/LRR-repeat protein At2g432607.5e-0621.89Show/hide
Query:  KRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKF-DLPISISSLFFAHISPFRKLHCVDLDPKQGMSSVASFS-------FHPDLS
        + + N NS + + PEL++ +LL+LP+ ++  CR+V K W +L+ + +F +  +S+ +     ++ +      D   ++ +   + F         H D S
Subjt:  KRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKF-DLPISISSLFFAHISPFRKLHCVDLDPKQGMSSVASFS-------FHPDLS

Query:  STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPIS-NADRVIRL----------YHYGFGFSPKTKHYKLARLSFAYDKFAILVE
          +++    C G++C             P +  + +LNP T++  + P   N +   R+          +  GFG       YK+ R+SFA+ +      
Subjt:  STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPIS-NADRVIRL----------YHYGFGFSPKTKHYKLARLSFAYDKFAILVE

Query:  IFAFGT----NGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYR---LDIEDEEF
        +   G      G+W  +   P ++      V  +G +YW+         + +YR   LD+  EEF
Subjt:  IFAFGT----NGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYR---LDIEDEEF

Q9C627 Putative F-box protein At1g469841.3e-0523.23Show/hide
Query:  LPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISS-----LFFAHISPFRKLHCVDLDPKQGMSS---VASFSFHPDLSST-NISIINFC
        LP +LI  IL +LP  ++  CRLV K W +++ +  F     I S     L F  I    K H       +       V +  +H   S    +      
Subjt:  LPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISS-----LFFAHISPFRKLHCVDLDPKQGMSS---VASFSFHPDLSST-NISIINFC

Query:  NGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYG--FGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGK--WTHVGF-V
        NG +  Y +     K  +  +    I NP T +    P    D  ++  H    FG+ P  K +K+  ++ + +      ++   GT  K  W  + +  
Subjt:  NGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYG--FGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGK--WTHVGF-V

Query:  PPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGY-HVWKMEE--DFSWIKAFDVLLP
        P   R K +G+  +G LY+      +    +I R D+  EEF+F EI +  Y E   I+ + N    L +  P+     +W +++     W K  + + P
Subjt:  PPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGY-HVWKMEE--DFSWIKAFDVLLP

Query:  EHHRPCHLQLIRACEDGKILCLLA----GLYLILYNPETKRTELLTNQDAEVK
        +       + IRA + G++ C  +     LY+  Y+ E +  + +  +  E K
Subjt:  EHHRPCHLQLIRACEDGKILCLLA----GLYLILYNPETKRTELLTNQDAEVK

Arabidopsis top hitse value%identityAlignment
AT1G46984.1 F-box family protein9.1e-0723.23Show/hide
Query:  LPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISS-----LFFAHISPFRKLHCVDLDPKQGMSS---VASFSFHPDLSST-NISIINFC
        LP +LI  IL +LP  ++  CRLV K W +++ +  F     I S     L F  I    K H       +       V +  +H   S    +      
Subjt:  LPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISS-----LFFAHISPFRKLHCVDLDPKQGMSS---VASFSFHPDLSST-NISIINFC

Query:  NGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYG--FGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGK--WTHVGF-V
        NG +  Y +     K  +  +    I NP T +    P    D  ++  H    FG+ P  K +K+  ++ + +      ++   GT  K  W  + +  
Subjt:  NGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYG--FGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGK--WTHVGF-V

Query:  PPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGY-HVWKMEE--DFSWIKAFDVLLP
        P   R K +G+  +G LY+      +    +I R D+  EEF+F EI +  Y E   I+ + N    L +  P+     +W +++     W K  + + P
Subjt:  PPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGY-HVWKMEE--DFSWIKAFDVLLP

Query:  EHHRPCHLQLIRACEDGKILCLLA----GLYLILYNPETKRTELLTNQDAEVK
        +       + IRA + G++ C  +     LY+  Y+ E +  + +  +  E K
Subjt:  EHHRPCHLQLIRACEDGKILCLLA----GLYLILYNPETKRTELLTNQDAEVK

AT2G43260.1 F-box and associated interaction domains-containing protein5.3e-0721.89Show/hide
Query:  KRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKF-DLPISISSLFFAHISPFRKLHCVDLDPKQGMSSVASFS-------FHPDLS
        + + N NS + + PEL++ +LL+LP+ ++  CR+V K W +L+ + +F +  +S+ +     ++ +      D   ++ +   + F         H D S
Subjt:  KRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKF-DLPISISSLFFAHISPFRKLHCVDLDPKQGMSSVASFS-------FHPDLS

Query:  STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPIS-NADRVIRL----------YHYGFGFSPKTKHYKLARLSFAYDKFAILVE
          +++    C G++C             P +  + +LNP T++  + P   N +   R+          +  GFG       YK+ R+SFA+ +      
Subjt:  STNISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPIS-NADRVIRL----------YHYGFGFSPKTKHYKLARLSFAYDKFAILVE

Query:  IFAFGT----NGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYR---LDIEDEEF
        +   G      G+W  +   P ++      V  +G +YW+         + +YR   LD+  EEF
Subjt:  IFAFGT----NGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYR---LDIEDEEF

AT3G06240.1 F-box family protein3.2e-1227.24Show/hide
Query:  ISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTN------EYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARL-------------SFAYDKF
        + I+   NGL+C           + P EG VF+ NP T       E F+P     +R      YGFGF   T  YKL +L             S   D +
Subjt:  ISIINFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTN------EYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARL-------------SFAYDKF

Query:  AILVEIFAFGTNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGE------GSCIIGVFNDTLYLTLSIP
          +  +     +G +T              GV+F+G ++WV  + R  + +V+   DI+ EEF+  E+ +P   E       + ++G  N  L +  S  
Subjt:  AILVEIFAFGTNGKWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGE------GSCIIGVFNDTLYLTLSIP

Query:  DVGYHVWKME---EDFSWIKAFDVLLPEHHRPCHLQLIRACEDGKILCLLAGLYLILYNPETKRTELL
        DV   +W M    E  SW +    LL    +P    L     D ++L  L G  L+LYN ET  +  L
Subjt:  DVGYHVWKME---EDFSWIKAFDVLLPEHHRPCHLQLIRACEDGKILCLLAGLYLILYNPETKRTELL

AT3G23880.1 F-box and associated interaction domains-containing protein1.2e-0622.81Show/hide
Query:  LPPELIKLILLKLPSVNLPSCRLVCKVWNNLV----LTCKFDLPISISSLFFAHISPFRKLHCVDLDPKQGM------SSVASFSFHPD--LSSTNISII
        LP E+++ ILL+LP  +L   + VC  W +L+       K  L +  S    +  SP+  +       K         +S    S H    L      ++
Subjt:  LPPELIKLILLKLPSVNLPSCRLVCKVWNNLV----LTCKFDLPISISSLFFAHISPFRKLHCVDLDPKQGM------SSVASFSFHPD--LSSTNISII

Query:  NFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIR----LYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGK-WTHV
          C+GL+C + D  +           +++ NP      +  +S++D        +  YGFG+      YK+  L     +  + +E   + T  K W   
Subjt:  NFCNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIR----LYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGK-WTHV

Query:  GFVPPLIRWKD---HGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCI---IGVFNDTLYLTLSIPDVGYHVWKME---EDFSW
           P  +   D    G+Y +G L W         T + Y  D+  +EFK  E+  P      C    +G     L +          VW M+   E +SW
Subjt:  GFVPPLIRWKD---HGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCI---IGVFNDTLYLTLSIPDVGYHVWKME---EDFSW

Query:  IKAFDVL-LPEHHRPCHLQLIRACEDGKILCLLAGLYLILYN
         K   +  L +  RP  +       DG ++ L     L LYN
Subjt:  IKAFDVL-LPEHHRPCHLQLIRACEDGKILCLLAGLYLILYN

AT5G65850.1 F-box and associated interaction domains-containing protein2.9e-0525.91Show/hide
Query:  EKKRKSN-INSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAH-ISPFRKLHCVDLDPKQGMSSVASFSFHPDLSSTNI
        EKK   N     + +P ++I  ILL+LP+ ++ +CR V K+W +++  C+ D     + LF    +   + L C   D      S      +P  +S+ I
Subjt:  EKKRKSN-INSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAH-ISPFRKLHCVDLDPKQGMSSVASFSFHPDLSSTNI

Query:  SIINF---------CNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFK--PPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAF
        S+ NF          NGL+C  F R    +T+        I NP T        P+  +    R + Y     P  K +K+  LS+  D+  +L      
Subjt:  SIINF---------CNGLLCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFK--PPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAF

Query:  GTNG-KWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKF---QEIFIPHYGEGSCI
        GT    W  +    P I      +  +G LY+   +L   D  +I   D+  E+F+F    E FI    +G+ I
Subjt:  GTNG-KWTHVGFVPPLIRWKDHGVYFDGGLYWVGNDLRQPDTKVIYRLDIEDEEFKF---QEIFIPHYGEGSCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGAGGAAAAGCAACATAAATTCGGAGCTTCCACTCCCACCTGAGTTGATAAAGCTAATACTGTTGAAACTTCCCTCCGTGAATTTGCCCAGTTGTCGGCT
CGTGTGTAAAGTATGGAACAATCTCGTCTTAACTTGTAAGTTTGATCTTCCAATCTCAATTTCCAGTCTGTTTTTTGCCCATATTTCTCCTTTTCGCAAGCTCCATTGTG
TGGACTTGGATCCTAAACAAGGGATGAGCAGTGTTGCCTCATTTAGTTTCCATCCTGATTTGTCCTCTACTAATATCTCAATCATCAATTTTTGCAATGGACTCCTCTGT
TGTTATTTTGACCGTGGACGACCCACCAAAACACTACTACCTTGTGAAGGTGAAGTTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCTCCCATCTCGAACGC
GGATAGGGTTATACGTCTATATCATTATGGATTTGGGTTTAGTCCTAAAACAAAACACTACAAATTAGCAAGACTCTCCTTTGCCTATGATAAATTTGCTATCTTAGTGG
AAATTTTTGCATTTGGCACAAATGGCAAATGGACCCATGTTGGTTTTGTGCCTCCTTTAATCAGATGGAAAGACCATGGTGTTTACTTCGATGGAGGTCTCTATTGGGTT
GGAAATGACCTACGACAACCTGATACAAAGGTCATATACCGTTTGGATATAGAAGATGAGGAATTCAAATTCCAAGAAATTTTTATTCCCCATTATGGCGAGGGTTCTTG
TATAATTGGAGTCTTTAATGACACTCTCTATCTAACTCTGTCCATCCCAGATGTTGGATACCATGTGTGGAAGATGGAAGAAGATTTTTCATGGATTAAAGCATTTGATG
TGCTCCTACCAGAGCATCATCGTCCATGTCACCTTCAACTTATCAGAGCTTGTGAAGATGGAAAGATCTTGTGTCTTCTTGCTGGACTCTATTTAATCTTGTATAATCCT
GAGACTAAGAGGACAGAGTTATTGACAAATCAAGATGCTGAAGTTAAGAAAGTTCATCGGATTGACTCTTTCAATTTCAACTCTCTCACCAAGATTTTAGCCGGGAATGC
T
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGAGGAAAAGCAACATAAATTCGGAGCTTCCACTCCCACCTGAGTTGATAAAGCTAATACTGTTGAAACTTCCCTCCGTGAATTTGCCCAGTTGTCGGCT
CGTGTGTAAAGTATGGAACAATCTCGTCTTAACTTGTAAGTTTGATCTTCCAATCTCAATTTCCAGTCTGTTTTTTGCCCATATTTCTCCTTTTCGCAAGCTCCATTGTG
TGGACTTGGATCCTAAACAAGGGATGAGCAGTGTTGCCTCATTTAGTTTCCATCCTGATTTGTCCTCTACTAATATCTCAATCATCAATTTTTGCAATGGACTCCTCTGT
TGTTATTTTGACCGTGGACGACCCACCAAAACACTACTACCTTGTGAAGGTGAAGTTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCTCCCATCTCGAACGC
GGATAGGGTTATACGTCTATATCATTATGGATTTGGGTTTAGTCCTAAAACAAAACACTACAAATTAGCAAGACTCTCCTTTGCCTATGATAAATTTGCTATCTTAGTGG
AAATTTTTGCATTTGGCACAAATGGCAAATGGACCCATGTTGGTTTTGTGCCTCCTTTAATCAGATGGAAAGACCATGGTGTTTACTTCGATGGAGGTCTCTATTGGGTT
GGAAATGACCTACGACAACCTGATACAAAGGTCATATACCGTTTGGATATAGAAGATGAGGAATTCAAATTCCAAGAAATTTTTATTCCCCATTATGGCGAGGGTTCTTG
TATAATTGGAGTCTTTAATGACACTCTCTATCTAACTCTGTCCATCCCAGATGTTGGATACCATGTGTGGAAGATGGAAGAAGATTTTTCATGGATTAAAGCATTTGATG
TGCTCCTACCAGAGCATCATCGTCCATGTCACCTTCAACTTATCAGAGCTTGTGAAGATGGAAAGATCTTGTGTCTTCTTGCTGGACTCTATTTAATCTTGTATAATCCT
GAGACTAAGAGGACAGAGTTATTGACAAATCAAGATGCTGAAGTTAAGAAAGTTCATCGGATTGACTCTTTCAATTTCAACTCTCTCACCAAGATTTTAGCCGGGAATGC
T
Protein sequenceShow/hide protein sequence
MEKKRKSNINSELPLPPELIKLILLKLPSVNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHISPFRKLHCVDLDPKQGMSSVASFSFHPDLSSTNISIINFCNGLLC
CYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSFAYDKFAILVEIFAFGTNGKWTHVGFVPPLIRWKDHGVYFDGGLYWV
GNDLRQPDTKVIYRLDIEDEEFKFQEIFIPHYGEGSCIIGVFNDTLYLTLSIPDVGYHVWKMEEDFSWIKAFDVLLPEHHRPCHLQLIRACEDGKILCLLAGLYLILYNP
ETKRTELLTNQDAEVKKVHRIDSFNFNSLTKILAGNA