CuGenDBv2

Gene ID	MS018266
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein ALP1-like
Genome location	scaffold23:146896..147242
RNA-Seq Expression	MS018266
Synteny	MS018266
Gene Ontology terms	GO:0016788 - hydrolase activity, acting on ester bonds (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006912 - Harbinger transposase-derived protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0068176.1 putative nuclease HARBI1 isoform X1 [Cucumis melo var. makuwa]

2.9e-38

70.94

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH
        P+GR+EVF+YRHSSLRN  ERCFG+LK RFPILKQMP YP+ TQKYILI CC VHNY+RLN+ +DDLFND+SNE MIV+D  +LS   Q+ IIELDVS+ 
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH

Query:  HLRRMSRVRDDIEDQIW
        HLR M+R RDDI +QIW
Subjt:  HLRRMSRVRDDIEDQIW

KAF7123090.1 hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]

1.5e-26

55.56

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSL--SKQNSIIELDVSQH
        P+  +E F++RHSSLRN  ERCFG+LK RFPILKQMP Y V TQKYI  ACC VHN++R+++  DDLF +YS E+M+++  Q    S   + +E+DV++ 
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSL--SKQNSIIELDVSQH

Query:  HLRRMSRVRDDIEDQIW
         LRRMS VRD I +QIW
Subjt:  HLRRMSRVRDDIEDQIW

KAF7126536.1 hypothetical protein RHSIM_Rhsim11G0185300 [Rhododendron simsii]

1.5e-26

55.56

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSL--SKQNSIIELDVSQH
        P+  +E F++RHSSLRN  ERCFG+LK RFPILKQMP Y V TQKYI  ACC VHN++R+++  DDLF +YS E+M+++  Q    S   + +E+DV++ 
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSL--SKQNSIIELDVSQH

Query:  HLRRMSRVRDDIEDQIW
         LRRMS VRD I +QIW
Subjt:  HLRRMSRVRDDIEDQIW

TYK06269.1 protein ALP1-like [Cucumis melo var. makuwa]

2.1e-36

69.23

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH
        P+GR+EVF+YRHSSLRN  ERCFG+LK RFPILKQMP YP+ TQKYI I CC VHNY+RLN+ +DDLFN +SNE MIV+D  +LS   Q+ IIELDVS+ 
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH

Query:  HLRRMSRVRDDIEDQIW
        HLR M+R RDDI +QIW
Subjt:  HLRRMSRVRDDIEDQIW

TYK21096.1 protein ALP1-like [Cucumis melo var. makuwa]

2.9e-38

70.94

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH
        P+GR+EVF+YRHSSLRN  ERCFG+LK RFPILKQMP YP+ TQKYILI CC VHNY+RLN+ +DDLFND+SNE MIV+D  +LS   Q+ IIELDVS+ 
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH

Query:  HLRRMSRVRDDIEDQIW
        HLR M+R RDDI +QIW
Subjt:  HLRRMSRVRDDIEDQIW

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E0U9 uncharacterized protein LOC103496041

3.6e-26

71.76

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLS
        P+GR EVF+YRHSSLRN  ERCFG+LK RFPILKQMP YP+ T KYI IACC +HNY+RLN+ +DDLFND+SNE MIV+D+ +LS
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLS

A0A5A7VNL5 Putative nuclease HARBI1 isoform X1

1.4e-38

70.94

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH
        P+GR+EVF+YRHSSLRN  ERCFG+LK RFPILKQMP YP+ TQKYILI CC VHNY+RLN+ +DDLFND+SNE MIV+D  +LS   Q+ IIELDVS+ 
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH

Query:  HLRRMSRVRDDIEDQIW
        HLR M+R RDDI +QIW
Subjt:  HLRRMSRVRDDIEDQIW

A0A5D3C7F6 Protein ALP1-like

1.0e-36

69.23

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH
        P+GR+EVF+YRHSSLRN  ERCFG+LK RFPILKQMP YP+ TQKYI I CC VHNY+RLN+ +DDLFN +SNE MIV+D  +LS   Q+ IIELDVS+ 
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH

Query:  HLRRMSRVRDDIEDQIW
        HLR M+R RDDI +QIW
Subjt:  HLRRMSRVRDDIEDQIW

A0A5D3DC11 Protein ALP1-like

1.4e-38

70.94

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Query:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH
        P+GR+EVF+YRHSSLRN  ERCFG+LK RFPILKQMP YP+ TQKYILI CC VHNY+RLN+ +DDLFND+SNE MIV+D  +LS   Q+ IIELDVS+ 
Subjt:  PQGRKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSK--QNSIIELDVSQH

Query:  HLRRMSRVRDDIEDQIW
        HLR M+R RDDI +QIW
Subjt:  HLRRMSRVRDDIEDQIW

A0A7J6E2G0 Uncharacterized protein (Fragment)

4.6e-21

51.3

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Query:  RKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKD--LQSLSKQ-NSIIELDVSQHHL
        ++E+F+YRHSSLRN  ERCFG+LK RFPILKQMP Y +  QKYI+IACC +HN++R  N+E D++ D   +   V+D  +QS  +  N  +E  +S+  L
Subjt:  RKEVFSYRHSSLRN-NERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKD--LQSLSKQ-NSIIELDVSQHHL

Query:  RRMSRVRDDIEDQIW
        R M+ VRD+I D IW
Subjt:  RRMSRVRDDIEDQIW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)

1.0e-12

35.9

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Query:  KEVFSYRHSSL-RNNERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMI-VKDLQSLSKQNSIIELDVSQHHLRRM
        KE+F+ RH  L R   R FG LK RFPIL   P YP+ TQ  ++IA C +HNYVRL   +D +F  +  E++    + + ++ +   +E+   +H  R  
Subjt:  KEVFSYRHSSL-RNNERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMI-VKDLQSLSKQNSIIELDVSQHHLRRM

Query:  S-----RVRDDIEDQIW
              R+RD+I  ++W
Subjt:  S-----RVRDDIEDQIW

Sequences

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CDS sequence

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CATCCTCAAGGTAGGAAAGAGGTGTTTAGCTATCGACATTCTTCACTACGAAACAATGAACGTTGTTTTGGCATGTTGAAAGTTCGATTTCCTATTCTTAAACAAATGCC
TCTTTATCCAGTCGACACACAAAAATATATACTAATAGCATGTTGTATTGTTCATAATTATGTTAGACTAAATAATAGTGAAGATGATCTCTTTAATGATTATAGCAATG
AATCAATGATCGTTAAAGATTTACAAAGTTTGTCAAAACAAAATAGTATAATCGAACTAGATGTAAGTCAACATCATTTAAGGCGAATGAGTCGAGTGAGAGATGACATT
GAAGATCAAATTTGG

mRNA sequence

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Protein sequence

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HPQGRKEVFSYRHSSLRNNERCFGMLKVRFPILKQMPLYPVDTQKYILIACCIVHNYVRLNNSEDDLFNDYSNESMIVKDLQSLSKQNSIIELDVSQHHLRRMSRVRDDI
EDQIW

MS018266 (gene) of Bitter gourd (TR) v1 genome