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MS018269 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018269
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold23:194977..195252
RNA-Seq ExpressionMS018269
SyntenyMS018269
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN77848.1 hypothetical protein VITISV_020832 [Vitis vinifera]3.4e-1337.78Show/hide
Query:  RGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        R   W+ +     SGGIL +WD  ++C K+V+ G FS+++  +      +W++ V GP     RK F+ EL D+Y L    WC+GGDFN+
Subjt:  RGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

RVW69476.1 hypothetical protein CK203_054478 [Vitis vinifera]9.9e-1340.22Show/hide
Query:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        S R   W+A+     SGGIL++WD  ++  +DV+ G FS+ +         +WL+ V GP     RK F+ EL DL+ L   SWC+GGDFN+
Subjt:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

RVW96835.1 hypothetical protein CK203_026052 [Vitis vinifera]2.0e-1341.3Show/hide
Query:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        S R   W+A+     SGGIL++WD  ++  +DV+ G FS+ +         +WL+ V GP +   RK F+ EL DL+SL   SWC+GGDFN+
Subjt:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

TYJ98683.1 hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]2.0e-1343.48Show/hide
Query:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        SS+ IGW  ++ F + GGIL MWD +++ V + +KG +SL I    S     W+TNV GP D +ER+  +  L  L   C G+WCIGG  NI
Subjt:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

XP_031739979.1 uncharacterized protein LOC116403332 [Cucumis sativus]1.1e-1442.39Show/hide
Query:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        SS  +GW  ++ +  SGGIL++W E  + V D I+G FS+ I   F+     W+T V GP+  + R  F+ EL  LY LC+ +WC+GGDFN+
Subjt:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

TrEMBL top hitse value%identityAlignment
A0A438GBB7 Uncharacterized protein4.8e-1340.22Show/hide
Query:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        S R   W+A+     SGGIL++WD  ++  +DV+ G FS+ +         +WL+ V GP     RK F+ EL DL+ L   SWC+GGDFN+
Subjt:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

A0A438GK38 Uncharacterized protein4.8e-1336.67Show/hide
Query:  RGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        R   W+ +     SGGIL +WD  ++C ++V+ G FS+ +  +  +   +W++ V GP     RK F+ EL+D+Y L    WC+GGDFN+
Subjt:  RGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

A0A438IJP8 Uncharacterized protein9.7e-1441.3Show/hide
Query:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        S R   W+A+     SGGIL++WD  ++  +DV+ G FS+ +         +WL+ V GP +   RK F+ EL DL+SL   SWC+GGDFN+
Subjt:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

A0A5D3BHE3 Uncharacterized protein9.7e-1443.48Show/hide
Query:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        SS+ IGW  ++ F + GGIL MWD +++ V + +KG +SL I    S     W+TNV GP D +ER+  +  L  L   C G+WCIGG  NI
Subjt:  SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

A5AE29 Reverse transcriptase domain-containing protein1.7e-1337.78Show/hide
Query:  RGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI
        R   W+ +     SGGIL +WD  ++C K+V+ G FS+++  +      +W++ V GP     RK F+ EL D+Y L    WC+GGDFN+
Subjt:  RGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCTCCAGAGGTATTGGTTGGTTGGCCATTGATTTTTTTGAGAAATCAGGAGGCATTTTGGTCATGTGGGATGAAACCAGAGTTTGCGTTAAGGATGTCATTAAGGGGGT
TTTTTCCCTGATCATTTTGCTTTCTTTTTCTAATATTAATGACATCTGGTTAACAAATGTTTGTGGTCCAACAGATTGCAAAGAAAGGAAGCATTTTTTCACTGAGTTAT
GGGATCTTTATTCCCTTTGTGATGGCAGTTGGTGCATTGGCGGGGACTTCAATATC
mRNA sequenceShow/hide mRNA sequence
AGCTCCAGAGGTATTGGTTGGTTGGCCATTGATTTTTTTGAGAAATCAGGAGGCATTTTGGTCATGTGGGATGAAACCAGAGTTTGCGTTAAGGATGTCATTAAGGGGGT
TTTTTCCCTGATCATTTTGCTTTCTTTTTCTAATATTAATGACATCTGGTTAACAAATGTTTGTGGTCCAACAGATTGCAAAGAAAGGAAGCATTTTTTCACTGAGTTAT
GGGATCTTTATTCCCTTTGTGATGGCAGTTGGTGCATTGGCGGGGACTTCAATATC
Protein sequenceShow/hide protein sequence
SSRGIGWLAIDFFEKSGGILVMWDETRVCVKDVIKGVFSLIILLSFSNINDIWLTNVCGPTDCKERKHFFTELWDLYSLCDGSWCIGGDFNI