; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018270 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018270
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionERCC4 domain-containing protein
Genome locationscaffold23:202664..203063
RNA-Seq ExpressionMS018270
SyntenyMS018270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059964.1 hypothetical protein E6C27_scaffold340G00030 [Cucumis melo var. makuwa]4.6e-1135.77Show/hide
Query:  LNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF-ETLKDSEIE
        +NW+ +    K    S+  W +I++ WR+V  L+  K+ NG R  F  DLW  +   K++F  LF +A LP+ +V  +WD  +SSW ++F   LKD EI 
Subjt:  LNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF-ETLKDSEIE

Query:  DYLSILSTLSLVSLSTEKDKLLW
        ++ S+LS LS   ++   D   W
Subjt:  DYLSILSTLSLVSLSTEKDKLLW

TYK01564.1 hypothetical protein E5676_scaffold451G001410 [Cucumis melo var. makuwa]4.3e-0936Show/hide
Query:  SIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAFETL
        SI+  D  NWH+  K+ K   C R PW ++S+ W  +  L++ ++ N  R  F LD W S++ F    P LF +A L +  V + WD + +SW+I F  L
Subjt:  SIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAFETL

TYK06564.1 hypothetical protein E5676_scaffold453G00250 [Cucumis melo var. makuwa]7.8e-1133.83Show/hide
Query:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF
        V  SIY  +S +WH++    K     + PW  IS   R ++ L+S K+ NG R  F  D+W  +  F+  F  LF V+ +P+ +V   WD S+ SW I F
Subjt:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF

Query:  ETL-KDSEIEDYLSILSTLSLVSLSTEKDKLLW
          L K+ EI ++  +L  LS   ++   D+  W
Subjt:  ETL-KDSEIEDYLSILSTLSLVSLSTEKDKLLW

TYK22579.1 hypothetical protein E5676_scaffold584G00340 [Cucumis melo var. makuwa]2.4e-1234.59Show/hide
Query:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF
        V  SI+  ++ +WH+   + K     R PW +IS+ W+ V+ L+  K+ NG R  F  D W  ++  K +   LF +A LP  +V  +WD  ++SW I F
Subjt:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF

Query:  -ETLKDSEIEDYLSILSTLSLVSLSTEKDKLLW
           LKD EI+D+ S+L  LS   ++  +D  +W
Subjt:  -ETLKDSEIEDYLSILSTLSLVSLSTEKDKLLW

TYK28319.1 uncharacterized protein E5676_scaffold600G001450 [Cucumis melo var. makuwa]3.9e-1029.91Show/hide
Query:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF
        V  +I+ +    WH+     K N C R  W +IS+ WR ++ L++ ++ NG R +F  D W  ++   ++ P L  +A LP  ++ ++WD  +SSW +  
Subjt:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF

Query:  ETLKDSE
          L   E
Subjt:  ETLKDSE

TrEMBL top hitse value%identityAlignment
A0A5D3BDZ2 Uncharacterized protein2.2e-1135.77Show/hide
Query:  LNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF-ETLKDSEIE
        +NW+ +    K    S+  W +I++ WR+V  L+  K+ NG R  F  DLW  +   K++F  LF +A LP+ +V  +WD  +SSW ++F   LKD EI 
Subjt:  LNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF-ETLKDSEIE

Query:  DYLSILSTLSLVSLSTEKDKLLW
        ++ S+LS LS   ++   D   W
Subjt:  DYLSILSTLSLVSLSTEKDKLLW

A0A5D3BQW7 Uncharacterized protein2.1e-0936Show/hide
Query:  SIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAFETL
        SI+  D  NWH+  K+ K   C R PW ++S+ W  +  L++ ++ N  R  F LD W S++ F    P LF +A L +  V + WD + +SW+I F  L
Subjt:  SIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAFETL

A0A5D3C5F2 Uncharacterized protein3.8e-1133.83Show/hide
Query:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF
        V  SIY  +S +WH++    K     + PW  IS   R ++ L+S K+ NG R  F  D+W  +  F+  F  LF V+ +P+ +V   WD S+ SW I F
Subjt:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF

Query:  ETL-KDSEIEDYLSILSTLSLVSLSTEKDKLLW
          L K+ EI ++  +L  LS   ++   D+  W
Subjt:  ETL-KDSEIEDYLSILSTLSLVSLSTEKDKLLW

A0A5D3DH32 Uncharacterized protein1.2e-1234.59Show/hide
Query:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF
        V  SI+  ++ +WH+   + K     R PW +IS+ W+ V+ L+  K+ NG R  F  D W  ++  K +   LF +A LP  +V  +WD  ++SW I F
Subjt:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF

Query:  -ETLKDSEIEDYLSILSTLSLVSLSTEKDKLLW
           LKD EI+D+ S+L  LS   ++  +D  +W
Subjt:  -ETLKDSEIEDYLSILSTLSLVSLSTEKDKLLW

A0A5D3DY86 Uncharacterized protein1.9e-1029.91Show/hide
Query:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF
        V  +I+ +    WH+     K N C R  W +IS+ WR ++ L++ ++ NG R +F  D W  ++   ++ P L  +A LP  ++ ++WD  +SSW +  
Subjt:  VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAF

Query:  ETLKDSE
          L   E
Subjt:  ETLKDSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTATATCCAAGCATTTATGATGTAGACTCTTTAAACTGGCATTCTTTGAGAAAAAAAAAAAAAAGGAACGGTTGCTCAAGATGTCCATGGAACAATATATCCAAGCATTG
GAGAAATGTTCAACATCTCTCTTCTATCAAGGTACGCAATGGTATGAGATCCCATTTTTCGCTTGATTTGTGGTTTAGTGATTTGGTGTTTAAAGATCGTTTTCCCCATC
TTTTTGCTGTGGCTAAGCTTCCCCATAGTGCTGTTTGTGAAAATTGGGATGGCTCCTCTTCTTCTTGGGTCATTGCATTTGAAACCTTAAAAGATTCAGAGATCGAGGAT
TATTTATCCATTTTGTCAACTTTGAGCTTGGTGTCTCTCTCAACAGAAAAAGATAAATTGTTATGG
mRNA sequenceShow/hide mRNA sequence
GTATATCCAAGCATTTATGATGTAGACTCTTTAAACTGGCATTCTTTGAGAAAAAAAAAAAAAAGGAACGGTTGCTCAAGATGTCCATGGAACAATATATCCAAGCATTG
GAGAAATGTTCAACATCTCTCTTCTATCAAGGTACGCAATGGTATGAGATCCCATTTTTCGCTTGATTTGTGGTTTAGTGATTTGGTGTTTAAAGATCGTTTTCCCCATC
TTTTTGCTGTGGCTAAGCTTCCCCATAGTGCTGTTTGTGAAAATTGGGATGGCTCCTCTTCTTCTTGGGTCATTGCATTTGAAACCTTAAAAGATTCAGAGATCGAGGAT
TATTTATCCATTTTGTCAACTTTGAGCTTGGTGTCTCTCTCAACAGAAAAAGATAAATTGTTATGG
Protein sequenceShow/hide protein sequence
VYPSIYDVDSLNWHSLRKKKKRNGCSRCPWNNISKHWRNVQHLSSIKVRNGMRSHFSLDLWFSDLVFKDRFPHLFAVAKLPHSAVCENWDGSSSSWVIAFETLKDSEIED
YLSILSTLSLVSLSTEKDKLLW