CuGenDBv2

Gene ID	MS018273
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	scaffold23:268624..268830
RNA-Seq Expression	MS018273
Synteny	MS018273
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR006243 - Photosystem I PsaA IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

QEV85161.1 photosystem I P700 apoprotein A1 [Hexalectris revoluta]

6.3e-28

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II SS+ E+KI+VDRNPIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

QUB07357.1 photosystem I P700 apoprotein A1 [Liparis viridiflora]

6.3e-28

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II S +SE+KI+VDRNPIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

QWE50390.1 photosystem I P700 apoprotein A1 [Rourea microphylla]

2.8e-28

88.41

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II SS+SE+KILVDR+PIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

YP_009424637.1 photosystem I P700 apoprotein A1 [Gastrochilus fuscopunctatus]

6.3e-28

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II SS+ E+KI+VDRNPIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

YP_009455312.1 photosystem I P700 apoprotein A1 [Erythropalum scandens]

1.1e-27

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II S +SE+KILVDR+PIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

TrEMBL top hits

e value

%identity

Alignment

A0A0G2T2S8 Photosystem I P700 chlorophyll a apoprotein A1

5.2e-28

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II SS+ E+KILVDR+PIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

A0A286LQE6 Photosystem I P700 chlorophyll a apoprotein A1

3.0e-28

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II SS+ E+KI+VDRNPIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

A0A4D5YKN6 Photosystem I P700 chlorophyll a apoprotein A1

5.2e-28

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II SS+ E+KILVDR+PIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

A0A5J6KDW8 Photosystem I P700 chlorophyll a apoprotein A1

3.0e-28

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II SS+ E+KI+VDRNPIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

D3WBY3 Photosystem I P700 chlorophyll a apoprotein A1

5.2e-28

85.51

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II S +SE+KILVDR+P+KTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

SwissProt top hits

e value

%identity

Alignment

A4GYR0 Photosystem I P700 chlorophyll a apoprotein A1

5.3e-30

85.51

Show/hide

Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II S + E+KILVDR+PIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

Q06FW5 Photosystem I P700 chlorophyll a apoprotein A1

1.4e-30

86.96

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II SS+ E+KILVDR+PIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

Q14FF7 Photosystem I P700 chlorophyll a apoprotein A1

5.3e-30

85.51

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II S + E+KILVDR+PIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

Q3BAP0 Photosystem I P700 chlorophyll a apoprotein A1

3.1e-30

85.51

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II S + E+KI+VDRNPIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

Q7YJX2 Photosystem I P700 chlorophyll a apoprotein A1

2.4e-30

85.51

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Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II S +SE+KI+VDR+PIKTSFEEW RPGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

Arabidopsis top hits

e value

%identity

Alignment

ATCG00350.1 Photosystem I, PsaA/PsaB protein

8.4e-31

84.06

Show/hide

Query:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK
        +II S + E+KILVDR+PIKTSFEEW +PGHFSRTIAKGPDT TWIWNLHAD HDFDSHTSDLEEISRK
Subjt:  LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

Sequences

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CDS sequence

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CTGATTATTCATTCGTCGAAATCAGAACTAAAAATTTTGGTAGATAGGAATCCCATAAAAACTTCATTCGAGGAATGGGTCAGACCAGGTCATTTCTCGAGAACAATAGC
TAAGGGTCCTGATACTATCACTTGGATCTGGAATCTTCATGCTGATACTCACGATTTCGATAGTCATACTAGTGATTTGGAGGAGATCTCTCGAAAA

mRNA sequence

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Protein sequence

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LIIHSSKSELKILVDRNPIKTSFEEWVRPGHFSRTIAKGPDTITWIWNLHADTHDFDSHTSDLEEISRK

MS018273 (gene) of Bitter gourd (TR) v1 genome