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MS018275 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018275
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome b
Genome locationscaffold23:270224..270331
RNA-Seq ExpressionMS018275
SyntenyMS018275
Gene Ontology termsGO:0022904 - respiratory electron transport chain (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0045275 - respiratory chain complex III (cellular component)
GO:0008121 - ubiquinol-cytochrome-c reductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005797 - Cytochrome b/b6, N-terminal
IPR016174 - Di-haem cytochrome, transmembrane
IPR027387 - Cytochrome b/b6-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABH09158.1 apocytochrome B, partial [Silene vulgaris]1.4e-10100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
ABU50868.1 apocytochrome b, partial [Silene dioica]1.4e-10100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
ACV71649.1 apocytochrome b, partial [Oxalis violacea]1.4e-10100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
AZQ21883.1 cytochrome b [Silene vulgaris subsp. prostrata]1.4e-10100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
QKO26613.1 apocytochrome b, partial [Afrothismia gesnerioides]1.4e-10100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
TrEMBL top hitse value%identityAlignment
A0A0Y0URM4 Cytochrome b6.7e-11100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
A0A1Y3C041 Cytochrome b6.7e-11100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
A0A2P1MA74 Cytochrome b (Fragment)6.7e-11100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
E9KZM1 Cytochrome b6.7e-11100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
S4W8Z3 Cytochrome b (Fragment)6.7e-11100Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
SwissProt top hitse value%identityAlignment
P05718 Cytochrome b3.1e-1397.22Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPF+LVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
P0C523 Cytochrome b1.5e-1294.44Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLH+LLPF+LVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
P0C524 Cytochrome b1.5e-1294.44Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLH+LLPF+LVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
P42792 Cytochrome b1.5e-1294.44Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLH+LLPF+LVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Q9ZZT8 Cytochrome b3.1e-1397.22Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPF+LVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
Arabidopsis top hitse value%identityAlignment
AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal2.2e-1497.22Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPF+LVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
ATMG00220.1 apocytochrome b2.2e-1497.22Show/hide
Query:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN
        DNATLNRFFSLHHLLPF+LVGASLLHLAALHQYGSN
Subjt:  DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACAATGCCACCTTAAATCGTTTTTTTAGTCTTCATCATTTACTCCCTTTTCTTTTAGTAGGCGCCAGTCTTCTTCATCTGGCCGCATTGCATCAATATGGATCAAAT
mRNA sequenceShow/hide mRNA sequence
GACAATGCCACCTTAAATCGTTTTTTTAGTCTTCATCATTTACTCCCTTTTCTTTTAGTAGGCGCCAGTCTTCTTCATCTGGCCGCATTGCATCAATATGGATCAAAT
Protein sequenceShow/hide protein sequence
DNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSN