; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018366 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018366
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0690 protein C1orf52 homolog
Genome locationscaffold342:288321..289613
RNA-Seq ExpressionMS018366
SyntenyMS018366
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575926.1 hypothetical protein SDJN03_26565, partial [Cucurbita argyrosperma subsp. sororia]1.3e-7289.27Show/hide
Query:  MPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETR
        MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KRK+ AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G+ETR
Subjt:  MPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETR

Query:  ENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ENR+TEESYEERQKTRAALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  ENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_022150145.1 UPF0690 protein C1orf52 homolog [Momordica charantia]5.4e-87100Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG
        MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG

Query:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_022953507.1 UPF0690 protein C1orf52 homolog [Cucurbita moschata]3.1e-7488.95Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG
        MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KRK+ AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG

Query:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        +ETRENR+TEESYEERQKTRAALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_022991319.1 UPF0690 protein C1orf52 homolog [Cucurbita maxima]6.2e-7590.06Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG
        MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KRKS AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG

Query:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        +ETRENRETEESYEERQKTRAALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_038896833.1 UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida]2.4e-7185.79Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSN
        MKR +PWSDEEDNS    SSLSQSDSDADED+GETKASFRVKA GRSSKEKD +VKS  KRKS AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS 
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSN

Query:  GKETRENRETEESYEERQKTRAALENGEQLLTAQTR--------KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        G+ETRENRETEESYEERQKTRAALENGEQLLTAQTR        KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  GKETRENRETEESYEERQKTRAALENGEQLLTAQTR--------KEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

TrEMBL top hitse value%identityAlignment
A0A1S3BRX7 Uncharacterized protein2.0e-7184.38Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSN
        MKR MPWSDEEDNS    SSLSQSDSD DED+GETKASFRVK GGRSSKEKDT+VKS  KRKS AVDF+ L+RHGY+GGPSVL VPPPKENEKQDWSWS 
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSN

Query:  GKETRENRETEESYEERQKTRAALENGEQLLTAQTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        G+ETRENRETEESYEERQKTRAALENGEQLLTAQTRK          EKKN+SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  GKETRENRETEESYEERQKTRAALENGEQLLTAQTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A5D3DRL7 UPF0690 protein C1orf52-like protein2.0e-7184.38Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSN
        MKR MPWSDEEDNS    SSLSQSDSD DED+GETKASFRVK GGRSSKEKDT+VKS  KRKS AVDF+ L+RHGY+GGPSVL VPPPKENEKQDWSWS 
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKS-AKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSN

Query:  GKETRENRETEESYEERQKTRAALENGEQLLTAQTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        G+ETRENRETEESYEERQKTRAALENGEQLLTAQTRK          EKKN+SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  GKETRENRETEESYEERQKTRAALENGEQLLTAQTRK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A6J1DAL0 UPF0690 protein C1orf52 homolog2.6e-87100Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG
        MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG

Query:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A6J1GNF0 UPF0690 protein C1orf52 homolog1.5e-7488.95Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG
        MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KRK+ AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG

Query:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        +ETRENR+TEESYEERQKTRAALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A6J1JUH2 UPF0690 protein C1orf52 homolog3.0e-7590.06Show/hide
Query:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG
        MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+VKS KRKS AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G
Subjt:  MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNG

Query:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        +ETRENRETEESYEERQKTRAALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  KETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G04614.1 unknown protein2.6e-3149.18Show/hide
Query:  MPWSDEED----NSSSKDSSLSQSDSDADE-DSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSN
        M W D++D    +SS + SS S SDS+ D  + GE K         +  K K    + AK+   A D+ +L++HGYK    + ++P P   EKQDWSW+ 
Subjt:  MPWSDEED----NSSSKDSSLSQSDSDADE-DSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSN

Query:  GKETRENRETEESYEERQKTR-AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        GK+ +   E +ESY+ER+ TR AA+  GE +  AQ R ++KN+SFSQKEK+KR+LGQASRGKNYVEEEKR LRESG+YSGFD+
Subjt:  GKETRENRETEESYEERQKTR-AALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGACCGATGCCATGGAGTGATGAAGAGGACAATTCGTCATCTAAAGACTCGTCTTTGTCACAGTCAGATTCAGACGCTGATGAAGATAGTGGCGAGACGAAAGC
AAGCTTTCGAGTTAAAGCTGGGGGCCGCTCCTCTAAAGAAAAAGACACTCAAGTAAAATCTGCAAAGCGGAAGAGCACTGCTGTGGACTTCAATGCGTTGAAACGCCATG
GCTACAAAGGTGGACCATCAGTCTTGAATGTGCCACCACCAAAAGAGAATGAGAAGCAAGATTGGTCATGGTCCAATGGTAAGGAGACTCGGGAAAATCGAGAGACTGAA
GAATCGTACGAAGAAAGACAGAAAACAAGAGCTGCATTAGAAAACGGAGAGCAGCTGCTAACTGCACAAACTCGAAAGGAGAAGAAGAATATTTCCTTCTCCCAGAAGGA
AAAGAGGAAAAGAGAGCTTGGACAAGCAAGCAGGGGGAAAAATTATGTTGAGGAAGAAAAGAGAATGTTGAGGGAAAGTGGCATCTACTCTGGTTTTGATACT
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGACCGATGCCATGGAGTGATGAAGAGGACAATTCGTCATCTAAAGACTCGTCTTTGTCACAGTCAGATTCAGACGCTGATGAAGATAGTGGCGAGACGAAAGC
AAGCTTTCGAGTTAAAGCTGGGGGCCGCTCCTCTAAAGAAAAAGACACTCAAGTAAAATCTGCAAAGCGGAAGAGCACTGCTGTGGACTTCAATGCGTTGAAACGCCATG
GCTACAAAGGTGGACCATCAGTCTTGAATGTGCCACCACCAAAAGAGAATGAGAAGCAAGATTGGTCATGGTCCAATGGTAAGGAGACTCGGGAAAATCGAGAGACTGAA
GAATCGTACGAAGAAAGACAGAAAACAAGAGCTGCATTAGAAAACGGAGAGCAGCTGCTAACTGCACAAACTCGAAAGGAGAAGAAGAATATTTCCTTCTCCCAGAAGGA
AAAGAGGAAAAGAGAGCTTGGACAAGCAAGCAGGGGGAAAAATTATGTTGAGGAAGAAAAGAGAATGTTGAGGGAAAGTGGCATCTACTCTGGTTTTGATACT
Protein sequenceShow/hide protein sequence
MKRPMPWSDEEDNSSSKDSSLSQSDSDADEDSGETKASFRVKAGGRSSKEKDTQVKSAKRKSTAVDFNALKRHGYKGGPSVLNVPPPKENEKQDWSWSNGKETRENRETE
ESYEERQKTRAALENGEQLLTAQTRKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT