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MS018380 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018380
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionElongation factor
Genome locationscaffold342:445684..446503
RNA-Seq ExpressionMS018380
SyntenyMS018380
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB39388.1 hypothetical protein L484_025085 [Morus notabilis]2.9e-1980.7Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGST
        MGW RS L+SPLKK+WDRLHS H  R+GIYILYKDVKSCPCEDVQ+LWSILVESG++
Subjt:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGST

KAG2697077.1 hypothetical protein I3760_07G089400 [Carya illinoinensis]6.5e-1975.81Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGSTLDLPS
        MGW +SLL SPLKK+W+RLHS H  R+GIYILYKDVKSCPCEDVQ+LWSILVES +   LPS
Subjt:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGSTLDLPS

KAG6575915.1 hypothetical protein SDJN03_26554, partial [Cucurbita argyrosperma subsp. sororia]6.5e-1955.45Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPHTNR------------------------------------KGIYILYKDVKSCPCEDVQMLWSILVESGSTLD-LPSP
        MGWFRSLL+SPLKKLW RLHSPH NR                                    KGIYILYKDVKSCPCEDVQMLWSILVE+GS+    PSP
Subjt:  MGWFRSLLISPLKKLWDRLHSPHTNR------------------------------------KGIYILYKDVKSCPCEDVQMLWSILVESGSTLD-LPSP

Query:  P
        P
Subjt:  P

KGN44804.1 hypothetical protein Csa_015628 [Cucumis sativus]3.7e-2281.25Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPH-TNRKGIYILYKDVKSCPCEDVQMLWSILVESGSTLDLPSP
        MGWF+S LISP KKLWDRLHSPH +NRKGIYILYKDVKSCPCEDVQMLWSILV+S S  + P P
Subjt:  MGWFRSLLISPLKKLWDRLHSPH-TNRKGIYILYKDVKSCPCEDVQMLWSILVESGSTLDLPSP

PON94924.1 elongation factor [Trema orientale]6.5e-1982.14Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGS
        MGW +S L+SPLKKLWDRLHS H  R+GIYILYKDVKSCPCEDVQ+LWSILVESG+
Subjt:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGS

TrEMBL top hitse value%identityAlignment
A0A067FZ56 Uncharacterized protein5.3e-1981.13Show/hide
Query:  GWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVES
        GW  SL++SPLKKLWDRLHS H  R+G+YILYKDVKSCPCEDVQ+LWSILVES
Subjt:  GWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVES

A0A0A0K7C3 Uncharacterized protein1.8e-2281.25Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPH-TNRKGIYILYKDVKSCPCEDVQMLWSILVESGSTLDLPSP
        MGWF+S LISP KKLWDRLHSPH +NRKGIYILYKDVKSCPCEDVQMLWSILV+S S  + P P
Subjt:  MGWFRSLLISPLKKLWDRLHSPH-TNRKGIYILYKDVKSCPCEDVQMLWSILVESGSTLDLPSP

A0A2P5FAV2 Elongation factor3.1e-1982.14Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGS
        MGW +S L+SPLKKLWDRLHS H  R+GIYILYKDVKSCPCEDVQ+LWSILVESG+
Subjt:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGS

K7MYL2 Uncharacterized protein4.1e-1977.78Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGST-LDLPS
        MGWF+SLL  PLKKLWDRLHS H  R+GIYILYKDVKSCPCEDV +LWSILVESG+    LPS
Subjt:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGST-LDLPS

W9QVP0 Uncharacterized protein1.4e-1980.7Show/hide
Query:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGST
        MGW RS L+SPLKK+WDRLHS H  R+GIYILYKDVKSCPCEDVQ+LWSILVESG++
Subjt:  MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGTTCAGATCCCTCCTCATTTCGCCATTGAAGAAGCTCTGGGATCGTCTTCACTCCCCCCATACAAATCGAAAAGGAATCTACATTCTATACAAGGATGTGAA
GTCTTGCCCCTGTGAAGATGTGCAAATGCTTTGGTCCATTCTCGTCGAGTCGGGCTCGACTCTCGATCTGCCATCGCCACCG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGTTCAGATCCCTCCTCATTTCGCCATTGAAGAAGCTCTGGGATCGTCTTCACTCCCCCCATACAAATCGAAAAGGAATCTACATTCTATACAAGGATGTGAA
GTCTTGCCCCTGTGAAGATGTGCAAATGCTTTGGTCCATTCTCGTCGAGTCGGGCTCGACTCTCGATCTGCCATCGCCACCG
Protein sequenceShow/hide protein sequence
MGWFRSLLISPLKKLWDRLHSPHTNRKGIYILYKDVKSCPCEDVQMLWSILVESGSTLDLPSPP