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MS018396 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018396
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein S19
Genome locationscaffold342:633920..634012
RNA-Seq ExpressionMS018396
SyntenyMS018396
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001266 - Ribosomal protein S19e
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593129.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0996.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
RXH89655.1 hypothetical protein DVH24_032012 [Malus domestica]1.3e-0996.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
XP_022938991.1 40S ribosomal protein S19-3 [Cucurbita moschata]1.3e-0996.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
XP_022954406.1 40S ribosomal protein S19-3-like [Cucurbita moschata]1.3e-0996.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
XP_023513679.1 40S ribosomal protein S19-1-like [Cucurbita pepo subsp. pepo]4.5e-10100Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        QVELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
TrEMBL top hitse value%identityAlignment
A0A498J4M9 F-box domain-containing protein6.4e-1096.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
A0A6J1H7M6 40S ribosomal protein S19-3-like6.4e-1096.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
A0A6J1JTW8 40S ribosomal protein S19-3-like6.4e-1096.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
A0A6J1JX06 40S ribosomal protein S19-36.4e-1096.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
A0A6P4A1R8 40S ribosomal protein S19-36.4e-1096.77Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +VELPPWTDIVKTARFKELAPYDPDWYYVRA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
SwissProt top hitse value%identityAlignment
P40978 40S ribosomal protein S191.4e-0980.65Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        ++ELP W DIVKTARFKEL PYDPDWYY RA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
Q8T5Z4 40S ribosomal protein S191.7e-0767.74Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        +++LP W D+VKTA  KELAPYDPDW+Y+RA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
Q9FNP8 40S ribosomal protein S19-31.4e-0977.42Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        ++ELP WTDIVKT + KELAPYDPDWYY+RA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
Q9LF30 40S ribosomal protein S19-26.1e-1080.65Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        ++ELP WTDIVKT R KELAPYDPDWYY+RA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
Q9SGA6 40S ribosomal protein S19-18.0e-1077.42Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        ++ELP WTDIVKT + KELAPYDPDWYY+RA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
Arabidopsis top hitse value%identityAlignment
AT3G02080.1 Ribosomal protein S19e family protein5.7e-1177.42Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        ++ELP WTDIVKT + KELAPYDPDWYY+RA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
AT5G15520.1 Ribosomal protein S19e family protein4.4e-1180.65Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        ++ELP WTDIVKT R KELAPYDPDWYY+RA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
AT5G61170.1 Ribosomal protein S19e family protein9.7e-1177.42Show/hide
Query:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA
        ++ELP WTDIVKT + KELAPYDPDWYY+RA
Subjt:  QVELPPWTDIVKTARFKELAPYDPDWYYVRA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTCGAACTCCCACCATGGACAGATATAGTGAAGACTGCGAGATTCAAAGAGCTTGCCCCTTATGATCCTGATTGGTATTACGTGAGAGCT
mRNA sequenceShow/hide mRNA sequence
CAGGTCGAACTCCCACCATGGACAGATATAGTGAAGACTGCGAGATTCAAAGAGCTTGCCCCTTATGATCCTGATTGGTATTACGTGAGAGCT
Protein sequenceShow/hide protein sequence
QVELPPWTDIVKTARFKELAPYDPDWYYVRA