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MS018406 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018406
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold342:707453..707649
RNA-Seq ExpressionMS018406
SyntenyMS018406
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB58280.1 hypothetical protein L484_015614 [Morus notabilis]1.1e-0578.95Show/hide
Query:  SPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPH
        SPEFV TIPVS  MVNKKM+P AN  NMGVLYC EPPH
Subjt:  SPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPH
GFC35842.1 hypothetical protein [Tanacetum cinerariifolium]1.6e-1471.88Show/hide
Query:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPP---HMVAIQDFDSSGDCYDHGSSGE
        +SSPEF  TIPVSPPMVNK MDPTAN  NMGVLYCI+PP        +DFDSSGD YDHGS GE
Subjt:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPP---HMVAIQDFDSSGDCYDHGSSGE
KAF1856899.1 hypothetical protein Lal_00001930 [Lupinus albus]5.3e-1388.89Show/hide
Query:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
        +SSPEF GTIPVSPPMVNKKM+PTAN  NMGVLYCIEPPHMVAIQ
Subjt:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
KAF3635473.1 ATP synthase subunit alpha, chloroplastic [Capsicum annuum]5.1e-1675.76Show/hide
Query:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEP-PH-MVAIQDFDSSGDCYDHGSSGEVGT
        +SSPEF  TIPVSPPMVNKKM+PT N  NMGVLYCIEP PH     +DFDSSGD YDHGS GEVGT
Subjt:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEP-PH-MVAIQDFDSSGDCYDHGSSGEVGT
KAF5767741.1 hypothetical protein HanXRQr2_Chr14g0628261 [Helianthus annuus]1.4e-1391.11Show/hide
Query:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
        +SSPEF GTIPVSPPMVNKKMDPTAN  NMGVLYCIEPPHMVAIQ
Subjt:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
TrEMBL top hitse value%identityAlignment
A0A6A5L812 Uncharacterized protein2.6e-1388.89Show/hide
Query:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
        +SSPEF GTIPVSPPMVNKKM+PTAN  NMGVLYCIEPPHMVAIQ
Subjt:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
J3M0A0 Uncharacterized protein3.4e-0590Show/hide
Query:  MVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
        MVNKKM+PTAN  NMGVLYCIEPPHMVAIQ
Subjt:  MVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
M8AUQ9 Uncharacterized protein2.2e-1286.67Show/hide
Query:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
        +SSPEF  TIPVSPPMVNKKM+PTAN  NMGVLYCIEPPHMVAIQ
Subjt:  LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQ
W9QY14 Uncharacterized protein5.2e-0678.95Show/hide
Query:  SPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPH
        SPEFV TIPVS  MVNKKM+P AN  NMGVLYC EPPH
Subjt:  SPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTCTAGCCCTGAATTTGTCGGGACTATTCCAGTGAGTCCTCCTATGGTGAACAAAAAGATGGACCCTACAGCAAATAACACTAACATGGGTGTTTTGTATTGTATCGA
ACCCCCCCACATGGTAGCGATCCAAGATTTTGATTCGAGTGGGGACTGCTATGATCATGGTAGCAGTGGTGAAGTAGGCACC
mRNA sequenceShow/hide mRNA sequence
TTGTCTAGCCCTGAATTTGTCGGGACTATTCCAGTGAGTCCTCCTATGGTGAACAAAAAGATGGACCCTACAGCAAATAACACTAACATGGGTGTTTTGTATTGTATCGA
ACCCCCCCACATGGTAGCGATCCAAGATTTTGATTCGAGTGGGGACTGCTATGATCATGGTAGCAGTGGTGAAGTAGGCACC
Protein sequenceShow/hide protein sequence
LSSPEFVGTIPVSPPMVNKKMDPTANNTNMGVLYCIEPPHMVAIQDFDSSGDCYDHGSSGEVGT