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MS018423 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018423
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold476:152826..153062
RNA-Seq ExpressionMS018423
SyntenyMS018423
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC66671.1 hypothetical protein OsI_32959 [Oryza sativa Indica Group]3.7e-1652.56Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLP    R K   + +LK+K+W+ +QGWK  F S   KEILIK+  QAIP+Y MS F L K  C+E+T M  RFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

KAF5458402.1 hypothetical protein F2P56_022431 [Juglans regia]1.7e-1651.28Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLPS   R K   +  +KD++W+ M  WK  F S   KEIL+K+  QA+P+Y MS+F++PK  CNEI  MF+RFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.8e-1651.28Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLP+   R + + +N++KD++WK +QGWK   FS+  KE+LIK+  QAIP Y MS FRLPK    E   + ARFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]1.7e-1655.13Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLPS   R K   + F+K+++W  ++GWK +FFS  RKE+LIK+  QAIP+Y MS FRLPK   N I  M ARFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

XP_030923826.1 uncharacterized protein LOC115950728 [Quercus lobata]2.2e-1652.56Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLP+   R K   ++FLKD++WK +QGWK    S   KE+LIK+  Q+IP+Y M VF+LP   CNE+  M ARFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

TrEMBL top hitse value%identityAlignment
A0A0P0XT30 Os10g0191000 protein (Fragment)1.8e-1652.56Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLP    R K   + +LK+K+W+ +QGWK  F S   KEILIK+  QAIP+Y MS F L K  C+E+T M  RFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

A0A5B7AER2 Reverse transcriptase domain-containing protein1.4e-1650Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLPS+  R K   +NF+KD++W+ +QGWK    S   +E+LIK   QA+P+Y MS F++P   C EI RM +RFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

A0A6J1DAR4 uncharacterized protein LOC1110189541.4e-1651.28Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLP+   R + + +N++KD++WK +QGWK   FS+  KE+LIK+  QAIP Y MS FRLPK    E   + ARFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

B8BG19 Uncharacterized protein1.8e-1652.56Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLP    R K   + +LK+K+W+ +QGWK  F S   KEILIK+  QAIP+Y MS F L K  C+E+T M  RFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

B9G7V6 Uncharacterized protein1.8e-1652.56Show/hide
Query:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW
        YLGLP    R K   + +LK+K+W+ +QGWK  F S   KEILIK+  QAIP+Y MS F L K  C+E+T M  RFWW
Subjt:  YLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTATCTTGGCCTCCCTTCCTCTTTCTCTAGACGCAAAGGTCTAGATTGGAATTTTCTAAAGGATAAACTTTGGAAAGCTATGCAAGGGTGGAAGCGCGCTTTCTTCTC
AGTTAGAAGGAAAGAGATTCTTATTAAAAGTACTGGCCAAGCAATCCCATCCTATCCTATGAGCGTTTTCCGTCTACCAAAGGACTTTTGTAATGAAATCACCCGCATGT
TTGCCCGTTTCTGGTGG
mRNA sequenceShow/hide mRNA sequence
ATTTATCTTGGCCTCCCTTCCTCTTTCTCTAGACGCAAAGGTCTAGATTGGAATTTTCTAAAGGATAAACTTTGGAAAGCTATGCAAGGGTGGAAGCGCGCTTTCTTCTC
AGTTAGAAGGAAAGAGATTCTTATTAAAAGTACTGGCCAAGCAATCCCATCCTATCCTATGAGCGTTTTCCGTCTACCAAAGGACTTTTGTAATGAAATCACCCGCATGT
TTGCCCGTTTCTGGTGG
Protein sequenceShow/hide protein sequence
IYLGLPSSFSRRKGLDWNFLKDKLWKAMQGWKRAFFSVRRKEILIKSTGQAIPSYPMSVFRLPKDFCNEITRMFARFWW