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MS018424 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018424
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationscaffold476:154889..155077
RNA-Seq ExpressionMS018424
SyntenyMS018424
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009667403.1 ribosomal protein S7 [Thalassia hemprichii]3.4e-0459.02Show/hide
Query:  ISIGKESIEKERIGIDRY-ISRNKQKGNE-RRNINHGSTKPSPLGDLLKNKKEESHVNTME
        I++ K+ I ++RI ++RY  SRNKQKG E RRN NHGSTKPS  G LL  KKEES  N M+
Subjt:  ISIGKESIEKERIGIDRY-ISRNKQKGNE-RRNINHGSTKPSPLGDLLKNKKEESHVNTME
TrEMBL top hitse value%identityAlignment
A0A4Y1KCR6 30S ribosomal protein S7, chloroplastic1.6e-0459.02Show/hide
Query:  ISIGKESIEKERIGIDRY-ISRNKQKGNE-RRNINHGSTKPSPLGDLLKNKKEESHVNTME
        I++ K+ I ++RI ++RY  SRNKQKG E RRN NHGSTKPS  G LL  KKEES  N M+
Subjt:  ISIGKESIEKERIGIDRY-ISRNKQKGNE-RRNINHGSTKPSPLGDLLKNKKEESHVNTME
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAGATCCATACATCTCGATCGGAAAAGAATCAATAGAAAAAGAAAGAATCGGAATTGATCGATATATTTCTAGAAACAAACAAAAAGGAAATGAAAGACGAAACATAAA
TCATGGATCAACTAAGCCAAGCCCTCTCGGGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAA
mRNA sequenceShow/hide mRNA sequence
ATAGATCCATACATCTCGATCGGAAAAGAATCAATAGAAAAAGAAAGAATCGGAATTGATCGATATATTTCTAGAAACAAACAAAAAGGAAATGAAAGACGAAACATAAA
TCATGGATCAACTAAGCCAAGCCCTCTCGGGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAA
Protein sequenceShow/hide protein sequence
IDPYISIGKESIEKERIGIDRYISRNKQKGNERRNINHGSTKPSPLGDLLKNKKEESHVNTME