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MS018437 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018437
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4228 domain protein
Genome locationscaffold476:348387..348656
RNA-Seq ExpressionMS018437
SyntenyMS018437
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577418.1 hypothetical protein SDJN03_24992, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0945.19Show/hide
Query:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA-----PTTTELKIKITKRELVMLLGGHRLID-----------DVGDDAFETQPRSWRPSLK
        MGNCTS K L        +EE +E VKR L     DDGA      TTTE+KI++TKREL  LL    + +           +VGD++  T  RSWRPSL+
Subjt:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA-----PTTTELKIKITKRELVMLLGGHRLID-----------DVGDDAFETQPRSWRPSLK

Query:  SIPE
        SIPE
Subjt:  SIPE

KAG6600784.1 hypothetical protein SDJN03_06017, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1857.01Show/hide
Query:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA---PTTTELKIKITKRELVMLLGGHRLID--------------DVGDDAFETQPRSWRPSL
        MGNC S K  CGKSSRISDEEALEMVKRSLM   E   A    TTTELKIKITKREL MLL  + +++                 D   E QPRSW+PSL
Subjt:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA---PTTTELKIKITKRELVMLLGGHRLID--------------DVGDDAFETQPRSWRPSL

Query:  KSIPEAE
        +SIPEA+
Subjt:  KSIPEAE

XP_011652736.1 uncharacterized protein LOC105435072 [Cucumis sativus]4.5e-1852.17Show/hide
Query:  MGNCTSIKCLCGKSSRI-SDEEALEMVKRSLMVVME---DDGAPTTTELKIKITKRELVMLLGGHRLID---------------------DVGDDAFETQ
        MGNC S  CLCGK +RI SDEEALEM+KR +M   E      A TTTE+KIKITK+EL MLLG + +++                     D+ DDAFE Q
Subjt:  MGNCTSIKCLCGKSSRI-SDEEALEMVKRSLMVVME---DDGAPTTTELKIKITKRELVMLLGGHRLID---------------------DVGDDAFETQ

Query:  PRSWRPSLKSIPEAE
        PRSWRPSL+SIPE +
Subjt:  PRSWRPSLKSIPEAE

XP_016903026.1 PREDICTED: uncharacterized protein LOC103501581 [Cucumis melo]4.5e-1850Show/hide
Query:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMED----DGAP---------TTTELKIKITKRELVMLLGGHRLID---------------DVGDDAF
        MGNC S K LCGKS+RISDEEALEM+KR++M   ++    D  P         TTTE+KIKITKREL MLLG +++++               D+ D+  
Subjt:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMED----DGAP---------TTTELKIKITKRELVMLLGGHRLID---------------DVGDDAF

Query:  ETQPRSWRPSLKSIPEAE
        E QPRSWRPSL+SIPE +
Subjt:  ETQPRSWRPSLKSIPEAE

XP_022932152.1 uncharacterized protein LOC111438472 [Cucurbita moschata]1.7e-0946.08Show/hide
Query:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA---PTTTELKIKITKRELVMLLGGHRLID-----------DVGDDAFETQPRSWRPSLKSI
        MGNCTS K L        +EE +E VKR L     DDGA    TTTE+KI++TKREL  LL    + +           +VGD++  T  RSWRPSL+SI
Subjt:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA---PTTTELKIKITKRELVMLLGGHRLID-----------DVGDDAFETQPRSWRPSLKSI

Query:  PE
        PE
Subjt:  PE

TrEMBL top hitse value%identityAlignment
A0A0A0L7M3 Uncharacterized protein2.2e-1852.17Show/hide
Query:  MGNCTSIKCLCGKSSRI-SDEEALEMVKRSLMVVME---DDGAPTTTELKIKITKRELVMLLGGHRLID---------------------DVGDDAFETQ
        MGNC S  CLCGK +RI SDEEALEM+KR +M   E      A TTTE+KIKITK+EL MLLG + +++                     D+ DDAFE Q
Subjt:  MGNCTSIKCLCGKSSRI-SDEEALEMVKRSLMVVME---DDGAPTTTELKIKITKRELVMLLGGHRLID---------------------DVGDDAFETQ

Query:  PRSWRPSLKSIPEAE
        PRSWRPSL+SIPE +
Subjt:  PRSWRPSLKSIPEAE

A0A1S4E465 uncharacterized protein LOC1035015812.2e-1850Show/hide
Query:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMED----DGAP---------TTTELKIKITKRELVMLLGGHRLID---------------DVGDDAF
        MGNC S K LCGKS+RISDEEALEM+KR++M   ++    D  P         TTTE+KIKITKREL MLLG +++++               D+ D+  
Subjt:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMED----DGAP---------TTTELKIKITKRELVMLLGGHRLID---------------DVGDDAF

Query:  ETQPRSWRPSLKSIPEAE
        E QPRSWRPSL+SIPE +
Subjt:  ETQPRSWRPSLKSIPEAE

A0A5D3BTP7 DUF4228 domain protein2.2e-1850Show/hide
Query:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMED----DGAP---------TTTELKIKITKRELVMLLGGHRLID---------------DVGDDAF
        MGNC S K LCGKS+RISDEEALEM+KR++M   ++    D  P         TTTE+KIKITKREL MLLG +++++               D+ D+  
Subjt:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMED----DGAP---------TTTELKIKITKRELVMLLGGHRLID---------------DVGDDAF

Query:  ETQPRSWRPSLKSIPEAE
        E QPRSWRPSL+SIPE +
Subjt:  ETQPRSWRPSLKSIPEAE

A0A6J1EVV2 uncharacterized protein LOC1114384728.3e-1046.08Show/hide
Query:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA---PTTTELKIKITKRELVMLLGGHRLID-----------DVGDDAFETQPRSWRPSLKSI
        MGNCTS K L        +EE +E VKR L     DDGA    TTTE+KI++TKREL  LL    + +           +VGD++  T  RSWRPSL+SI
Subjt:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA---PTTTELKIKITKRELVMLLGGHRLID-----------DVGDDAFETQPRSWRPSLKSI

Query:  PE
        PE
Subjt:  PE

A0A6J1J7P7 uncharacterized protein LOC1114833159.2e-0942.99Show/hide
Query:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA--------PTTTELKIKITKRELVMLLGGHRL-----------IDDVGDDAFETQPRSWRP
        MGNCTS K L        +EE +E +KR L     DDGA         TTTE+KI++TKREL  LL    +           + +VGD++  T  RSWRP
Subjt:  MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGA--------PTTTELKIKITKRELVMLLGGHRL-----------IDDVGDDAFETQPRSWRP

Query:  SLKSIPE
        SL+SIPE
Subjt:  SLKSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTGCACAAGCATCAAATGTTTGTGTGGGAAATCATCAAGAATTAGCGATGAGGAGGCTCTGGAGATGGTGAAGAGAAGTCTTATGGTAGTTATGGAAGACGA
TGGAGCTCCGACGACCACGGAGTTGAAGATCAAGATAACGAAGAGAGAGCTAGTGATGTTACTGGGAGGTCACCGGTTGATCGACGACGTCGGGGACGATGCATTCGAGA
CGCAGCCGCGCTCGTGGCGGCCATCCCTCAAAAGCATCCCTGAGGCTGAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACTGCACAAGCATCAAATGTTTGTGTGGGAAATCATCAAGAATTAGCGATGAGGAGGCTCTGGAGATGGTGAAGAGAAGTCTTATGGTAGTTATGGAAGACGA
TGGAGCTCCGACGACCACGGAGTTGAAGATCAAGATAACGAAGAGAGAGCTAGTGATGTTACTGGGAGGTCACCGGTTGATCGACGACGTCGGGGACGATGCATTCGAGA
CGCAGCCGCGCTCGTGGCGGCCATCCCTCAAAAGCATCCCTGAGGCTGAG
Protein sequenceShow/hide protein sequence
MGNCTSIKCLCGKSSRISDEEALEMVKRSLMVVMEDDGAPTTTELKIKITKRELVMLLGGHRLIDDVGDDAFETQPRSWRPSLKSIPEAE