; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018448 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018448
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionH/ACA ribonucleoprotein complex non-core subunit NAF1
Genome locationscaffold898:114909..117050
RNA-Seq ExpressionMS018448
SyntenyMS018448
Gene Ontology termsGO:0000493 - box H/ACA snoRNP assembly (biological process)
GO:0001522 - pseudouridine synthesis (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005732 - small nucleolar ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR007504 - H/ACA ribonucleoprotein complex, subunit Gar1/Naf1
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR038664 - H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain
IPR040309 - H/ACA ribonucleoprotein complex non-core subunit Naf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149469.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia]1.0e-29488.45Show/hide
Query:  SEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEE
        S PVVQAS+EASDKSRDLN IIEEG+SKVSLVTG+GST NIDLEC+KD+ ESDVESEGTSSATTSSSSSHGR  NDEKD+E ENSSSSSS +SSCD+EEE
Subjt:  SEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEE

Query:  ENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGN
        EN+FTMKAEG GEIGELEEGEIRD++DED+EAS DQMVAWD GD  D DIDDDEE GV GGPISSKNELKVLPPVPQVYATL+P HQI+PVGVVLSIIGN
Subjt:  ENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGN

Query:  QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEF
        QVIVEGVEKHNPLNEGSILWITE RSPLGL+DEIFGPVK PYYSVRYNSESEVPTGICGGT VSFVLEFADY+LNNKDLYKKGYDASGVNDEEV DD+EF
Subjt:  QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEF

Query:  SDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHN
        SDDEKELEFKKMQRLAKRS NNNQKNGNGNNTRKKKNS QARKF QRTYQNAKIP+E RNYG+PTPQQAMM EGSKF QHT Q+AKMDM+QPSSNQNQHN
Subjt:  SDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHN

Query:  GPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGAAY
        GPP+APF YHGGCPNPSAA QCFING GVIP FPPTY+PCFTPAMNGIRPTEMPF LQQQQNPFFPNALPMNGMPWLLQN P QQVPQMPMMNTFGGAAY
Subjt:  GPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGAAY

Query:  PQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRGRR
        PQGLIGTSP LPNPLTSVG QGIHSGGLQFGQNQN LQPP PLAIPGSMEATQ FNPANSHP G   GNVAPPQFNPDSSSSQGR+S+GRGG SHFRGRR
Subjt:  PQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRGRR

Query:  GRRQTR
        GRRQTR
Subjt:  GRRQTR

XP_022150383.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia]0.0e+0092.93Show/hide
Query:  LVRSEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDE
        +V S PVVQAS+EASDKSRDLN IIEEG+SKVSLVTG+GST NIDLEC+KD+ ESDVESEGTSSATTSSSSSHGR  NDEKD+E ENSSSSSS +SSCD+
Subjt:  LVRSEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDE

Query:  EEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSI
        EEEEN+FTMKAEG GEIGELEEGEIRD++DED+EAS DQMVAWD GD  D DIDDDEE GV GGPISSKNELKVLPPVPQVYATL+PHHQILPVGVVLSI
Subjt:  EEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSI

Query:  IGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD
        IG+QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD
Subjt:  IGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD

Query:  EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQN
        EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQN KIPDE RNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSN N
Subjt:  EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQN

Query:  QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGA
        QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPA+NGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGG 
Subjt:  QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGA

Query:  AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRG
        AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSG  SGN APPQFNPDSSSSQG +S+GRGGDSHFRG
Subjt:  AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRG

Query:  RRGRRQTR
        RRGRRQTR
Subjt:  RRGRRQTR

XP_031736889.1 H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1 [Cucumis sativus]4.9e-22571.08Show/hide
Query:  EASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAE
        EA   S D N IIEEG+SKVSLV   G    ++LE + DD E DVESEGTSSA+TSSSSS G  S++E D+E E+SSSS+S  + CD+EEE+ E  ++AE
Subjt:  EASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAE

Query:  GRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVI
        G+ EIGELEEGEIRD DDED+EA AD MVAWD  D EDL  DD      +EEAG  GGPI+SKNELKVLPPVPQV+ATL+PHHQ+LPVGVVLS++GNQVI
Subjt:  GRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVI

Query:  VEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDD
        VEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV DD EFSDD
Subjt:  VEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDD

Query:  EKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHNG
        EKELEFKKMQRLAKR+MN+NQ+ N N NN RKKKN+++ARKF +RT++NA +PDE ++ YGQ TP+QA + EG KFD  T  +AKMDM++PS NQNQ  G
Subjt:  EKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHNG

Query:  PPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQ--------------QVP
        PP APF YHGGCPNPS A QCF+NG G++  FPPTYNPCFTPAMNGIRP EMPFQ QQQQNPFFPN LPMNGMPWLLQN   Q              Q+P
Subjt:  PPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQ--------------QVP

Query:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS
        QMPM+NTF GAAYPQG +G S  LPN  T+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G  SGNVAP QFN +SSS QGR+S
Subjt:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS

Query:  YGRGGDSHFRGRRGRRQTR
        +GRGG +HFRGRRG RQ+R
Subjt:  YGRGGDSHFRGRRGRRQTR

XP_031736890.1 H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X2 [Cucumis sativus]4.9e-22571.08Show/hide
Query:  EASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAE
        EA   S D N IIEEG+SKVSLV   G    ++LE + DD E DVESEGTSSA+TSSSSS G  S++E D+E E+SSSS+S  + CD+EEE+ E  ++AE
Subjt:  EASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAE

Query:  GRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVI
        G+ EIGELEEGEIRD DDED+EA AD MVAWD  D EDL  DD      +EEAG  GGPI+SKNELKVLPPVPQV+ATL+PHHQ+LPVGVVLS++GNQVI
Subjt:  GRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVI

Query:  VEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDD
        VEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV DD EFSDD
Subjt:  VEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDD

Query:  EKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHNG
        EKELEFKKMQRLAKR+MN+NQ+ N N NN RKKKN+++ARKF +RT++NA +PDE ++ YGQ TP+QA + EG KFD  T  +AKMDM++PS NQNQ  G
Subjt:  EKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHNG

Query:  PPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQ--------------QVP
        PP APF YHGGCPNPS A QCF+NG G++  FPPTYNPCFTPAMNGIRP EMPFQ QQQQNPFFPN LPMNGMPWLLQN   Q              Q+P
Subjt:  PPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQ--------------QVP

Query:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS
        QMPM+NTF GAAYPQG +G S  LPN  T+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G  SGNVAP QFN +SSS QGR+S
Subjt:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS

Query:  YGRGGDSHFRGRRGRRQTR
        +GRGG +HFRGRRG RQ+R
Subjt:  YGRGGDSHFRGRRGRRQTR

XP_031736891.1 H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X3 [Cucumis sativus]4.9e-22571.08Show/hide
Query:  EASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAE
        EA   S D N IIEEG+SKVSLV   G    ++LE + DD E DVESEGTSSA+TSSSSS G  S++E D+E E+SSSS+S  + CD+EEE+ E  ++AE
Subjt:  EASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAE

Query:  GRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVI
        G+ EIGELEEGEIRD DDED+EA AD MVAWD  D EDL  DD      +EEAG  GGPI+SKNELKVLPPVPQV+ATL+PHHQ+LPVGVVLS++GNQVI
Subjt:  GRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVI

Query:  VEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDD
        VEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV DD EFSDD
Subjt:  VEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDD

Query:  EKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHNG
        EKELEFKKMQRLAKR+MN+NQ+ N N NN RKKKN+++ARKF +RT++NA +PDE ++ YGQ TP+QA + EG KFD  T  +AKMDM++PS NQNQ  G
Subjt:  EKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHNG

Query:  PPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQ--------------QVP
        PP APF YHGGCPNPS A QCF+NG G++  FPPTYNPCFTPAMNGIRP EMPFQ QQQQNPFFPN LPMNGMPWLLQN   Q              Q+P
Subjt:  PPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQ--------------QVP

Query:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS
        QMPM+NTF GAAYPQG +G S  LPN  T+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G  SGNVAP QFN +SSS QGR+S
Subjt:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS

Query:  YGRGGDSHFRGRRGRRQTR
        +GRGG +HFRGRRG RQ+R
Subjt:  YGRGGDSHFRGRRGRRQTR

TrEMBL top hitse value%identityAlignment
A0A1S3CAT3 H/ACA ribonucleoprotein complex non-core subunit NAF16.9e-22572.3Show/hide
Query:  VQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEF
        +QAS EA + S DLN IIEEG+SKVSLV   G T  ++LE + DD E+DVESEGTSS +TSSSSS G  S++E D+E ENSSSSSS     D ++EE E+
Subjt:  VQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEF

Query:  TMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSII
         ++AEG+ EIGELEEGEIRD D ED+EASAD MVAWD  D EDLD DD      +EEA   GGPI+SKNELKVLPPVPQV+ATL+PHHQ+LPVGVVLS++
Subjt:  TMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSII

Query:  GNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE
        GNQVIVEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEV DD 
Subjt:  GNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE

Query:  EFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQ
        EFSDDEKELEFK+MQRLAKR+MN+NQ+ NGN NN RKKKN+++ARKF Q T++NA +PDE ++ YGQ TP+QA + EG KFD  T Q+AKMDM+QPS NQ
Subjt:  EFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQ

Query:  NQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFG
        NQ  GPP APF Y GGCP+ S A QCF+N  GV+  FPPTYNP FTPAMNGIRP EMPFQ  QQQNPFFPN LPMNGMPWLLQN P QQ+PQMPM+NTF 
Subjt:  NQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFG

Query:  GAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHF
        GAAYPQG +G+S  LPN LT+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G  SGN AP QFN +SSS QGR+S+GRGG  HF
Subjt:  GAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHF

Query:  RGRRGRRQTR
        RGRRG +Q+R
Subjt:  RGRRGRRQTR

A0A1S4E2D7 H/ACA ribonucleoprotein complex non-core subunit NAF14.0e-22571.89Show/hide
Query:  VRSEPV---VQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSC
        VRSE     +QAS EA + S DLN IIEEG+SKVSLV   G T  ++LE + DD E+DVESEGTSS +TSSSSS G  S++E D+E ENSSSSSS     
Subjt:  VRSEPV---VQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSC

Query:  DEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQIL
        D ++EE E+ ++AEG+ EIGELEEGEIRD D ED+EASAD MVAWD  D EDLD DD      +EEA   GGPI+SKNELKVLPPVPQV+ATL+PHHQ+L
Subjt:  DEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQIL

Query:  PVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV
        PVGVVLS++GNQVIVEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGV
Subjt:  PVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV

Query:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKM
        NDEEV DD EFSDDEKELEFK+MQRLAKR+MN+NQ+ NGN NN RKKKN+++ARKF Q T++NA +PDE ++ YGQ TP+QA + EG KFD  T Q+AKM
Subjt:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKM

Query:  DMIQPSSNQNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP
        DM+QPS NQNQ  GPP APF Y GGCP+ S A QCF+N  GV+  FPPTYNP FTPAMNGIRP EMPFQ  QQQNPFFPN LPMNGMPWLLQN P QQ+P
Subjt:  DMIQPSSNQNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP

Query:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS
        QMPM+NTF GAAYPQG +G+S  LPN LT+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G  SGN AP QFN +SSS QGR+S
Subjt:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS

Query:  YGRGGDSHFRGRRGRRQTR
        +GRGG  HFRGRRG +Q+R
Subjt:  YGRGGDSHFRGRRGRRQTR

A0A5D3CIV9 H/ACA ribonucleoprotein complex non-core subunit NAF14.0e-22571.89Show/hide
Query:  VRSEPV---VQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSC
        VRSE     +QAS EA + S DLN IIEEG+SKVSLV   G T  ++LE + DD E+DVESEGTSS +TSSSSS G  S++E D+E ENSSSSSS     
Subjt:  VRSEPV---VQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSC

Query:  DEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQIL
        D ++EE E+ ++AEG+ EIGELEEGEIRD D ED+EASAD MVAWD  D EDLD DD      +EEA   GGPI+SKNELKVLPPVPQV+ATL+PHHQ+L
Subjt:  DEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDD------DEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQIL

Query:  PVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV
        PVGVVLS++GNQVIVEGVEKHNPL+EGSILWITE RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLNNKDLYKKGYDASGV
Subjt:  PVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGV

Query:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKM
        NDEEV DD EFSDDEKELEFK+MQRLAKR+MN+NQ+ NGN NN RKKKN+++ARKF Q T++NA +PDE ++ YGQ TP+QA + EG KFD  T Q+AKM
Subjt:  NDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQK-NGNGNNTRKKKNSSQARKFDQRTYQNAKIPDE-RRNYGQPTPQQAMMPEGSKFDQHTTQEAKM

Query:  DMIQPSSNQNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP
        DM+QPS NQNQ  GPP APF Y GGCP+ S A QCF+N  GV+  FPPTYNP FTPAMNGIRP EMPFQ  QQQNPFFPN LPMNGMPWLLQN P QQ+P
Subjt:  DMIQPSSNQNQHNGPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVP

Query:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS
        QMPM+NTF GAAYPQG +G+S  LPN LT+VGAQGIHSGGLQFGQNQN LQP           A QQFNP NSHP G  SGN AP QFN +SSS QGR+S
Subjt:  QMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQS

Query:  YGRGGDSHFRGRRGRRQTR
        +GRGG  HFRGRRG +Q+R
Subjt:  YGRGGDSHFRGRRGRRQTR

A0A6J1D5T5 H/ACA ribonucleoprotein complex non-core subunit NAF14.8e-29588.45Show/hide
Query:  SEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEE
        S PVVQAS+EASDKSRDLN IIEEG+SKVSLVTG+GST NIDLEC+KD+ ESDVESEGTSSATTSSSSSHGR  NDEKD+E ENSSSSSS +SSCD+EEE
Subjt:  SEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEE

Query:  ENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGN
        EN+FTMKAEG GEIGELEEGEIRD++DED+EAS DQMVAWD GD  D DIDDDEE GV GGPISSKNELKVLPPVPQVYATL+P HQI+PVGVVLSIIGN
Subjt:  ENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGN

Query:  QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEF
        QVIVEGVEKHNPLNEGSILWITE RSPLGL+DEIFGPVK PYYSVRYNSESEVPTGICGGT VSFVLEFADY+LNNKDLYKKGYDASGVNDEEV DD+EF
Subjt:  QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEF

Query:  SDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHN
        SDDEKELEFKKMQRLAKRS NNNQKNGNGNNTRKKKNS QARKF QRTYQNAKIP+E RNYG+PTPQQAMM EGSKF QHT Q+AKMDM+QPSSNQNQHN
Subjt:  SDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHN

Query:  GPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGAAY
        GPP+APF YHGGCPNPSAA QCFING GVIP FPPTY+PCFTPAMNGIRPTEMPF LQQQQNPFFPNALPMNGMPWLLQN P QQVPQMPMMNTFGGAAY
Subjt:  GPPFAPF-YHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGAAY

Query:  PQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRGRR
        PQGLIGTSP LPNPLTSVG QGIHSGGLQFGQNQN LQPP PLAIPGSMEATQ FNPANSHP G   GNVAPPQFNPDSSSSQGR+S+GRGG SHFRGRR
Subjt:  PQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRGRR

Query:  GRRQTR
        GRRQTR
Subjt:  GRRQTR

A0A6J1D9A9 H/ACA ribonucleoprotein complex non-core subunit NAF10.0e+0092.93Show/hide
Query:  LVRSEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDE
        +V S PVVQAS+EASDKSRDLN IIEEG+SKVSLVTG+GST NIDLEC+KD+ ESDVESEGTSSATTSSSSSHGR  NDEKD+E ENSSSSSS +SSCD+
Subjt:  LVRSEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDE

Query:  EEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSI
        EEEEN+FTMKAEG GEIGELEEGEIRD++DED+EAS DQMVAWD GD  D DIDDDEE GV GGPISSKNELKVLPPVPQVYATL+PHHQILPVGVVLSI
Subjt:  EEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSI

Query:  IGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD
        IG+QVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD
Subjt:  IGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDD

Query:  EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQN
        EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQN KIPDE RNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSN N
Subjt:  EEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQN

Query:  QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGA
        QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPA+NGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGG 
Subjt:  QHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGA

Query:  AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRG
        AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSG  SGN APPQFNPDSSSSQG +S+GRGGDSHFRG
Subjt:  AYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRG

Query:  RRGRRQTR
        RRGRRQTR
Subjt:  RRGRRQTR

SwissProt top hitse value%identityAlignment
A6ZRW0 H/ACA ribonucleoprotein complex non-core subunit NAF11.3e-1026.4Show/hide
Query:  RNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMV
        +++++E  KDDV+  +  +G                N+ K DE    +  S+G  S   E E +  +      G  G  ++   +D++ ED         
Subjt:  RNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMV

Query:  AWDGGDSEDLDIDDDEEAGVVGGPISSKNEL--KVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGV--EKHNPLNEGSILWITELRSPLGLVDEI
          +GGD+  ++ +D++E     GPI SKNE+  + +P +P+ Y   E    I P+GV+ S   N +I+      +   L EGSI  + E R+ +G++ E+
Subjt:  AWDGGDSEDLDIDDDEEAGVVGGPISSKNEL--KVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGV--EKHNPLNEGSILWITELRSPLGLVDEI

Query:  FGPVKNPYYSVRY-----NSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFKKMQR-LAKRSMNNNQKNG
        FGP++NP+Y ++      N   E+   +  G     V   A ++   +    KG DAS   DEE+ ++E EFSDDEKE  FKKM++   +R   +N+K  
Subjt:  FGPVKNPYYSVRY-----NSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFKKMQR-LAKRSMNNNQKNG

Query:  NGNNTRKKKNSSQAR-----KFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQE----AKMDMIQPSSNQ----NQHNG---PPFAPF---Y
        N ++  K K + Q +     K       ++  P  +  Y     ++ +  E S              ++   Q S+N      Q NG   PP++PF    
Subjt:  NGNNTRKKKNSSQAR-----KFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQE----AKMDMIQPSSNQ----NQHNG---PPFAPF---Y

Query:  HGGCPNPSAAGQCFINGGGVIP--PFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNAL-PMNGMPWLLQNHPTQQVP
        +   P P             +P    PP YN       N   PT+  F    Q  P  P  + PMN M   +   P  Q P
Subjt:  HGGCPNPSAAGQCFINGGGVIP--PFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNAL-PMNGMPWLLQNHPTQQVP

P53919 H/ACA ribonucleoprotein complex non-core subunit NAF19.8e-1125.99Show/hide
Query:  RNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMV
        +++++E  KDDV+  +  +G                N+ K DE    +  S+G  S   E E +  +      G  G  ++   +D++ ED         
Subjt:  RNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMV

Query:  AWDGGDSEDLDIDDDEEAGVVGGPISSKNEL--KVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGV--EKHNPLNEGSILWITELRSPLGLVDEI
          +GGD+  ++ +D++E     GPI SKNE+  + +P +P+ Y   E    I P+GV+ S   N +I+      +   L EGSI  + E R+ +G++ E+
Subjt:  AWDGGDSEDLDIDDDEEAGVVGGPISSKNEL--KVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGV--EKHNPLNEGSILWITELRSPLGLVDEI

Query:  FGPVKNPYYSVRY-----NSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFKKMQRLAK-RSMNNNQKNG
        FGP++NP+Y ++      N   E+   +  G     V   A ++   +    KG DAS   DEE+ ++E EFSDDEKE  FKKM++  + R   +N+K  
Subjt:  FGPVKNPYYSVRY-----NSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFKKMQRLAK-RSMNNNQKNG

Query:  NGNNTRKKKNSSQAR-----KFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGS-----------KFDQHTTQEAKMDMIQPSSNQNQHNGPPFAPF---Y
        N ++  K K + Q +     K       ++  P  +  Y     ++ +  E S              QH  Q+   +        N    PP++PF    
Subjt:  NGNNTRKKKNSSQAR-----KFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGS-----------KFDQHTTQEAKMDMIQPSSNQNQHNGPPFAPF---Y

Query:  HGGCPNPSAAGQCFINGGGVIP--PFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNAL-PMNGMPWLLQNHPTQQVP
        +   P P             +P    PP YN       N   PT+  F    Q  P  P  + PMN M   +   P  Q P
Subjt:  HGGCPNPSAAGQCFINGGGVIP--PFPPTYNPCFTPAMNGIRPTEMPFQLQQQQNPFFPNAL-PMNGMPWLLQNHPTQQVP

Q3UMQ8 H/ACA ribonucleoprotein complex non-core subunit NAF14.1e-0928.7Show/hide
Query:  SSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISS
        +S S   DS+ E D +  +SSSSSS +SS                                       +   V  DG   ED  ++ + +      P+ +
Subjt:  SSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISS

Query:  KNELKV--LPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTH
        K+EL +  LP V ++   L     + P+G V SII   VI+E V    P+NE ++++ ++ R   G + EIFGPV +P+Y +R+NS   + + GI     
Subjt:  KNELKV--LPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTH

Query:  VSF---VLEFADYVLNNKDLYKKGYDASGVNDE----EVLDDEEFSDDEKELEFK--KMQRLAKRSMNNNQKNGNG-------NNTRKKKNSSQARKFDQ
        + F   + +F  Y+   K    +G DAS  ND+    EVLD   FSDDEKE E K  K  ++  R    ++ N +G        N     +S  ++ +  
Subjt:  VSF---VLEFADYVLNNKDLYKKGYDASGVNDE----EVLDDEEFSDDEKELEFK--KMQRLAKRSMNNNQKNGNG-------NNTRKKKNSSQARKFDQ

Query:  RTYQN--AKIPDERRNYGQPTPQQ
        R +    A+    RR++G+P PQQ
Subjt:  RTYQN--AKIPDERRNYGQPTPQQ

Q52KK4 H/ACA ribonucleoprotein complex non-core subunit NAF13.5e-0828.66Show/hide
Query:  SSSHGRDSNDEKD-DEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISS
        S S   DS+ E D D   +SSSSSS +SSC                   G L                    V  DG   ED+ ++ + +      P+ +
Subjt:  SSSHGRDSNDEKD-DEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISS

Query:  KNELKV--LPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTH
        K+EL +  LP V ++  TL     + P+G V SII   VI+E +    P+NE ++++ ++ R   G + EIFGPV +P+Y +R+NS   + + GI     
Subjt:  KNELKV--LPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTH

Query:  VSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFK--KMQRLAKRSMNNNQKNGNG-------NNTRKKKNSSQARKFDQRTY
        + F   + +F  Y+   K    +G DAS  ND+E   +  +FSDDEKE E K  K  ++  R    ++ N +G        N     +S  ++ +  R +
Subjt:  VSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEFK--KMQRLAKRSMNNNQKNGNG-------NNTRKKKNSSQARKFDQRTY

Query:  QNA--KIPDERRNYGQPTPQQ
             +    R ++G+P PQQ
Subjt:  QNA--KIPDERRNYGQPTPQQ

Q96HR8 H/ACA ribonucleoprotein complex non-core subunit NAF11.1e-0626.02Show/hide
Query:  VESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDD
        V S G +    +  S    DS+ + D E ++ SSSSS +SS       +                               +   V  DG D  DL I+ +
Subjt:  VESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDD

Query:  EEAGVVGGPISSKNELKV--LPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSES
         +      P+ +K+EL +  LP V ++   L    ++ P+G+V SII   VI+E +    P+NE ++++ ++ R   G + EIFGPV +P+Y +R+NS  
Subjt:  EEAGVVGGPISSKNELKV--LPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSES

Query:  EVPT-GICGGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEF---KKMQRLAKRSMNNN-----------QKNGNGNNT
         + + GI     + F   + +F  Y+   K    KG DAS  ND+E   +  +FSDDEKE E    KK Q   ++ + +             +N N +++
Subjt:  EVPT-GICGGTHVSF---VLEFADYVLNNKDLYKKGYDASGVNDEEVLDDE-EFSDDEKELEF---KKMQRLAKRSMNNN-----------QKNGNGNNT

Query:  RKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQ------QAMMPEGSKFDQHTTQEAKMDMIQ-PSSNQNQHN------GPPFAPFYHGGCPNPSAAG
          +       +   R +  A+ P  R  +G+P PQ        +  E S F         M     P    + HN       PP  P  + G   P+ A 
Subjt:  RKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQ------QAMMPEGSKFDQHTTQEAKMDMIQ-PSSNQNQHN------GPPFAPFYHGGCPNPSAAG

Query:  QCFINGGGVIPPFPP
           +N    +PP PP
Subjt:  QCFINGGGVIPPFPP

Arabidopsis top hitse value%identityAlignment
AT1G03530.1 nuclear assembly factor 12.3e-7137.21Show/hide
Query:  SEPVVQASVEASDKSRDLN------------CIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSS
        +EPVV +    +  + DL+            C IE G+ KVSL       ++ + + + D  ES+ E+  +S++++ SSSS   +S++++ D+ EN    
Subjt:  SEPVVQASVEASDKSRDLN------------CIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSS

Query:  SSGNSSCDEEE------EENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATL
           +    +E+      EE E     E  G+  ++E+ +  D DD+D +   ++MVAW   + +DL +   E       PI SKNELK LPPVP V  TL
Subjt:  SSGNSSCDEEE------EENEFTMKAEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATL

Query:  EPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKK
        EPHH  LPVGVVLS++  QVIVEG+EKH+PL EGSILWITE R+PLGLVDEIFGPVK PYY VR+NSESEVP G+C GT VSFV +FA ++LN K+L KK
Subjt:  EPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKK

Query:  GYDASGVNDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQ------RTYQNAKIPDERRN--YGQPTPQQAMMPEG
        GYDASG NDEE+ D+ EFSDDEKE E+++MQ+L KR M ++QK GN  N +KKKN    R          +   ++ +   R +   G P PQ    P  
Subjt:  GYDASGVNDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQ------RTYQNAKIPDERRN--YGQPTPQQAMMPEG

Query:  SKFDQHTTQEAKMDMIQPSSNQ----------NQHNGPPFAPFYHGG-CPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQ--QQN
        +   +  + +     + P  NQ             N   F P ++GG  P P   G      G    P+         PAM G       F + +  QQ 
Subjt:  SKFDQHTTQEAKMDMIQPSSNQ----------NQHNGPPFAPFYHGG-CPNPSAAGQCFINGGGVIPPFPPTYNPCFTPAMNGIRPTEMPFQLQQ--QQN

Query:  PFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSH-
        P  PN L  N     LQ HP    PQ  M         PQ  +     +P           H       Q Q + +P SP      M+A     P  S  
Subjt:  PFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGSMEATQQFNPANSH-

Query:  ---PSGVLSGNVAPPQ-FNPDSSSSQGRQSYGRG---GDSHF-RGR-RGRRQT
           PS + S      Q F+   SS +GR  +GRG   G   F RGR RGR+Q+
Subjt:  ---PSGVLSGNVAPPQ-FNPDSSSSQGRQSYGRG---GDSHF-RGR-RGRRQT

AT4G03380.1 BEST Arabidopsis thaliana protein match is: nuclear assembly factor 1 (TAIR:AT1G03530.1)1.2e-0639.29Show/hide
Query:  LPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVD-EIFGPVKNPYYSVRY-NSESEVPTGICGGTHVSFVLEFA
        +P GVV  +    ++V     H PLN G++L ITE + PLG VD   FG V NP Y V+  +SE ++P    GG   SF ++ +
Subjt:  LPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITELRSPLGLVD-EIFGPVKNPYYSVRY-NSESEVPTGICGGTHVSFVLEFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGTCAGGTCTGAGCCAGTTGTGCAGGCGAGTGTTGAGGCTTCTGATAAGTCTAGGGATTTGAATTGCATAATCGAGGAAGGGATATCCAAGGTTAGTTTGGTTACTGG
AACTGGAAGCACCAGGAACATTGATTTAGAGTGTCAAAAGGATGACGTTGAAAGTGATGTTGAGTCTGAGGGCACAAGTTCAGCTACAACATCCAGTAGCAGTAGCCATG
GCAGAGACAGCAATGATGAAAAAGATGACGAGGTAGAAAATTCATCATCTTCTAGTAGTGGCAACAGTAGTTGCGATGAAGAAGAAGAGGAGAACGAGTTCACTATGAAA
GCAGAGGGACGTGGAGAAATTGGTGAGCTCGAAGAAGGTGAGATAAGGGACATTGATGATGAAGACAAAGAGGCTTCTGCAGATCAAATGGTTGCGTGGGATGGTGGTGA
TAGTGAGGACCTGGACATTGATGATGATGAAGAGGCTGGTGTCGTAGGAGGGCCGATTAGTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCAGGTGTATGCCA
CACTAGAGCCACACCACCAGATTCTTCCTGTTGGAGTTGTTTTGTCAATAATTGGCAATCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTTAATGAAGGCTCT
ATCCTCTGGATAACTGAACTTAGATCTCCATTGGGGTTGGTAGATGAAATTTTTGGACCAGTAAAAAATCCTTATTATTCCGTAAGATACAATTCTGAAAGTGAAGTTCC
TACAGGGATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCTGATTATGTGCTCAACAACAAAGACCTATACAAGAAGGGGTATGATGCATCTGGAGTGAATG
ATGAAGAGGTGTTAGACGATGAAGAGTTTTCAGATGATGAGAAAGAGCTCGAGTTCAAGAAAATGCAGAGGTTGGCTAAGAGGTCTATGAATAACAACCAGAAAAATGGG
AACGGAAACAACACTAGAAAGAAGAAAAACTCTAGTCAAGCCAGGAAATTCGATCAGCGTACATATCAGAACGCAAAGATACCTGATGAGCGCAGAAATTATGGTCAGCC
CACACCCCAGCAAGCAATGATGCCTGAGGGCAGCAAATTTGATCAGCACACAACCCAGGAAGCAAAGATGGATATGATTCAGCCATCTTCCAATCAAAACCAGCACAACG
GCCCTCCTTTTGCTCCATTTTATCACGGTGGTTGTCCGAACCCTTCAGCGGCAGGGCAATGTTTTATCAATGGAGGTGGTGTTATTCCACCCTTTCCACCAACGTACAAC
CCCTGCTTTACCCCAGCAATGAATGGAATTAGGCCAACTGAAATGCCATTTCAGCTTCAGCAGCAGCAGAATCCATTCTTTCCCAACGCCCTTCCAATGAATGGTATGCC
ATGGCTATTACAGAATCACCCTACCCAGCAAGTGCCTCAAATGCCTATGATGAATACCTTTGGAGGAGCGGCATACCCACAGGGGCTCATAGGTACATCACCCGGCCTAC
CAAATCCTTTGACAAGCGTCGGGGCACAAGGAATCCATTCTGGTGGCCTACAGTTTGGACAGAATCAAAACTTGCTGCAGCCTCCTTCCCCCCTTGCCATCCCTGGAAGC
ATGGAAGCAACACAGCAATTCAATCCAGCCAACTCGCACCCATCTGGAGTACTTTCAGGAAACGTAGCACCACCGCAATTCAACCCGGACTCATCTTCAAGCCAGGGAAG
GCAATCTTATGGTCGAGGAGGGGATTCCCATTTTAGAGGTAGAAGAGGTCGGCGACAAACAAGA
mRNA sequenceShow/hide mRNA sequence
CTTGTCAGGTCTGAGCCAGTTGTGCAGGCGAGTGTTGAGGCTTCTGATAAGTCTAGGGATTTGAATTGCATAATCGAGGAAGGGATATCCAAGGTTAGTTTGGTTACTGG
AACTGGAAGCACCAGGAACATTGATTTAGAGTGTCAAAAGGATGACGTTGAAAGTGATGTTGAGTCTGAGGGCACAAGTTCAGCTACAACATCCAGTAGCAGTAGCCATG
GCAGAGACAGCAATGATGAAAAAGATGACGAGGTAGAAAATTCATCATCTTCTAGTAGTGGCAACAGTAGTTGCGATGAAGAAGAAGAGGAGAACGAGTTCACTATGAAA
GCAGAGGGACGTGGAGAAATTGGTGAGCTCGAAGAAGGTGAGATAAGGGACATTGATGATGAAGACAAAGAGGCTTCTGCAGATCAAATGGTTGCGTGGGATGGTGGTGA
TAGTGAGGACCTGGACATTGATGATGATGAAGAGGCTGGTGTCGTAGGAGGGCCGATTAGTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCAGGTGTATGCCA
CACTAGAGCCACACCACCAGATTCTTCCTGTTGGAGTTGTTTTGTCAATAATTGGCAATCAAGTCATTGTAGAGGGTGTTGAGAAGCACAATCCTCTTAATGAAGGCTCT
ATCCTCTGGATAACTGAACTTAGATCTCCATTGGGGTTGGTAGATGAAATTTTTGGACCAGTAAAAAATCCTTATTATTCCGTAAGATACAATTCTGAAAGTGAAGTTCC
TACAGGGATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCTGATTATGTGCTCAACAACAAAGACCTATACAAGAAGGGGTATGATGCATCTGGAGTGAATG
ATGAAGAGGTGTTAGACGATGAAGAGTTTTCAGATGATGAGAAAGAGCTCGAGTTCAAGAAAATGCAGAGGTTGGCTAAGAGGTCTATGAATAACAACCAGAAAAATGGG
AACGGAAACAACACTAGAAAGAAGAAAAACTCTAGTCAAGCCAGGAAATTCGATCAGCGTACATATCAGAACGCAAAGATACCTGATGAGCGCAGAAATTATGGTCAGCC
CACACCCCAGCAAGCAATGATGCCTGAGGGCAGCAAATTTGATCAGCACACAACCCAGGAAGCAAAGATGGATATGATTCAGCCATCTTCCAATCAAAACCAGCACAACG
GCCCTCCTTTTGCTCCATTTTATCACGGTGGTTGTCCGAACCCTTCAGCGGCAGGGCAATGTTTTATCAATGGAGGTGGTGTTATTCCACCCTTTCCACCAACGTACAAC
CCCTGCTTTACCCCAGCAATGAATGGAATTAGGCCAACTGAAATGCCATTTCAGCTTCAGCAGCAGCAGAATCCATTCTTTCCCAACGCCCTTCCAATGAATGGTATGCC
ATGGCTATTACAGAATCACCCTACCCAGCAAGTGCCTCAAATGCCTATGATGAATACCTTTGGAGGAGCGGCATACCCACAGGGGCTCATAGGTACATCACCCGGCCTAC
CAAATCCTTTGACAAGCGTCGGGGCACAAGGAATCCATTCTGGTGGCCTACAGTTTGGACAGAATCAAAACTTGCTGCAGCCTCCTTCCCCCCTTGCCATCCCTGGAAGC
ATGGAAGCAACACAGCAATTCAATCCAGCCAACTCGCACCCATCTGGAGTACTTTCAGGAAACGTAGCACCACCGCAATTCAACCCGGACTCATCTTCAAGCCAGGGAAG
GCAATCTTATGGTCGAGGAGGGGATTCCCATTTTAGAGGTAGAAGAGGTCGGCGACAAACAAGA
Protein sequenceShow/hide protein sequence
LVRSEPVVQASVEASDKSRDLNCIIEEGISKVSLVTGTGSTRNIDLECQKDDVESDVESEGTSSATTSSSSSHGRDSNDEKDDEVENSSSSSSGNSSCDEEEEENEFTMK
AEGRGEIGELEEGEIRDIDDEDKEASADQMVAWDGGDSEDLDIDDDEEAGVVGGPISSKNELKVLPPVPQVYATLEPHHQILPVGVVLSIIGNQVIVEGVEKHNPLNEGS
ILWITELRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEEFSDDEKELEFKKMQRLAKRSMNNNQKNG
NGNNTRKKKNSSQARKFDQRTYQNAKIPDERRNYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNQNQHNGPPFAPFYHGGCPNPSAAGQCFINGGGVIPPFPPTYN
PCFTPAMNGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQNHPTQQVPQMPMMNTFGGAAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQPPSPLAIPGS
MEATQQFNPANSHPSGVLSGNVAPPQFNPDSSSSQGRQSYGRGGDSHFRGRRGRRQTR