; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018467 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018467
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane amino acid transporter family protein
Genome locationscaffold898:362247..362638
RNA-Seq ExpressionMS018467
SyntenyMS018467
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
InterPro domainsIPR013057 - Amino acid transporter, transmembrane domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147778.1 amino acid transporter AVT1A-like isoform X1 [Momordica charantia]2.2e-3778.23Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSK+AVWTTV        +LMNPLARSI+E LP  ISDSYW  ILLRTTLV SS+ VAFLLP FGLVMALIGSF+SILVAVIIPTMCFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISATL
        REATKMQ +SSI++IGLGI SATL
Subjt:  REATKMQSSSSISIIGLGIISATL

XP_022941249.1 amino acid transporter AVT1A-like isoform X1 [Cucurbita moschata]1.0e-3170.49Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSKVAVWTTV        +LMNPLARSI+E LP  IS+S+W  ILLRT LVVSS+CVAFLLP FGLVMALIGS +SIL+AVI+P +CFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISA
         EA+KMQ + S  IIGLG++SA
Subjt:  REATKMQSSSSISIIGLGIISA

XP_022941259.1 amino acid transporter AVT1A-like isoform X2 [Cucurbita moschata]1.0e-3170.49Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSKVAVWTTV        +LMNPLARSI+E LP  IS+S+W  ILLRT LVVSS+CVAFLLP FGLVMALIGS +SIL+AVI+P +CFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISA
         EA+KMQ + S  IIGLG++SA
Subjt:  REATKMQSSSSISIIGLGIISA

XP_022971193.1 amino acid transporter AVT1A-like isoform X2 [Cucurbita maxima]1.0e-3170.49Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSKVAVWTTV        +LMNPLARSI+E LP  IS+S+W  ILLRT LVVSS+CVAFLLP FGLVMALIGS +SIL+AVI+P +CFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISA
         EA+KMQ + S  IIGLG++SA
Subjt:  REATKMQSSSSISIIGLGIISA

XP_023539400.1 amino acid transporter AVT1A-like isoform X1 [Cucurbita pepo subsp. pepo]1.0e-3170.49Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSKVAVWTTV        +LMNPLARSI+E LP  IS+S+W  ILLRT LVVSS+CVAFLLP FGLVMALIGS +SIL+AVI+P +CFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISA
         EA+KMQ + S  IIGLG++SA
Subjt:  REATKMQSSSSISIIGLGIISA

TrEMBL top hitse value%identityAlignment
A0A6J1D210 amino acid transporter AVT1A-like isoform X11.0e-3778.23Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSK+AVWTTV        +LMNPLARSI+E LP  ISDSYW  ILLRTTLV SS+ VAFLLP FGLVMALIGSF+SILVAVIIPTMCFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISATL
        REATKMQ +SSI++IGLGI SATL
Subjt:  REATKMQSSSSISIIGLGIISATL

A0A6J1FMR2 amino acid transporter AVT1A-like isoform X15.0e-3270.49Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSKVAVWTTV        +LMNPLARSI+E LP  IS+S+W  ILLRT LVVSS+CVAFLLP FGLVMALIGS +SIL+AVI+P +CFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISA
         EA+KMQ + S  IIGLG++SA
Subjt:  REATKMQSSSSISIIGLGIISA

A0A6J1FMS3 amino acid transporter AVT1A-like isoform X25.0e-3270.49Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSKVAVWTTV        +LMNPLARSI+E LP  IS+S+W  ILLRT LVVSS+CVAFLLP FGLVMALIGS +SIL+AVI+P +CFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISA
         EA+KMQ + S  IIGLG++SA
Subjt:  REATKMQSSSSISIIGLGIISA

A0A6J1I1A7 amino acid transporter AVT1A-like isoform X15.0e-3270.49Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSKVAVWTTV        +LMNPLARSI+E LP  IS+S+W  ILLRT LVVSS+CVAFLLP FGLVMALIGS +SIL+AVI+P +CFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISA
         EA+KMQ + S  IIGLG++SA
Subjt:  REATKMQSSSSISIIGLGIISA

A0A6J1I648 amino acid transporter AVT1A-like isoform X25.0e-3270.49Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKHAVTSKVAVWTTV        +LMNPLARSI+E LP  IS+S+W  ILLRT LVVSS+CVAFLLP FGLVMALIGS +SIL+AVI+P +CFLKI+G
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISA
         EA+KMQ + S  IIGLG++SA
Subjt:  REATKMQSSSSISIIGLGIISA

SwissProt top hitse value%identityAlignment
F4IUW3 Amino acid transporter AVT1C1.4e-1539.26Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        N+P+  + +K+AVWTTV        + ++P+A S++E +P     S+WY I +RT LV S++ V   +P FGLVM+LIGS +++LV +I+P  CFL IV 
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISATLVHILLCQKLQE
        R+ T  Q    + II +G IS+ +       K+ E
Subjt:  REATKMQSSSSISIIGLGIISATLVHILLCQKLQE

F4JE35 Amino acid transporter AVT1B4.5e-1436.29Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        N+P+  V SK+A+WTTV        + ++P+A S++E +P     S +Y I +R+ L +S++ V   +P FGLVM+LIGSF+++L+ +I+P  CFL I+ 
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISATL
        ++ T  Q +  I I+ +G + + +
Subjt:  REATKMQSSSSISIIGLGIISATL

O80668 Amino acid transporter AVT1A3.0e-2656.45Show/hide
Query:  NMPKHAVTSKVAVWTT-VSP-----MLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMP+    SKVA WTT VSP     +LMNPLARSI+E LP  +S++ W  +LLRT LV SS+C AFL+P FGL+MALIGS +SILVA+I+P +CF+KI+G
Subjt:  NMPKHAVTSKVAVWTT-VSP-----MLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISATL
         +AT+ Q   S  I+ +G++S TL
Subjt:  REATKMQSSSSISIIGLGIISATL

Q8GYS4 Amino acid transporter AVT1D3.8e-1342.98Show/hide
Query:  NMPKHAVTSKVAVWTTV-SPM-----LMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKH   SKVAVWT V +PM      + P+  S++E +P     S    IL RT LV S++ VA  +P F +V ALIGSF+++LVA+I P +C+L I+ 
Subjt:  NMPKHAVTSKVAVWTTV-SPM-----LMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIIS
         + +  Q    I II  G++S
Subjt:  REATKMQSSSSISIIGLGIIS

Q8LPF4 Amino acid transporter AVT1E6.1e-1139.84Show/hide
Query:  NMPKHAVTSKVAVWT-TVSPM-----LMNPLARSIQEQLPPIISD--SYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKI
        NMP H  +SK+AVWT  V+PM      + P+  S++E +P       S    +L RT LV+S++ VA  +P F  V ALIGSFI++L+A+I P +C++ I
Subjt:  NMPKHAVTSKVAVWT-TVSPM-----LMNPLARSIQEQLPPIISD--SYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKI

Query:  VGREATKMQSSSSISIIGLGIIS
        +    T  Q    I I+ +GI+S
Subjt:  VGREATKMQSSSSISIIGLGIIS

Arabidopsis top hitse value%identityAlignment
AT2G39130.1 Transmembrane amino acid transporter family protein1.0e-1639.26Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        N+P+  + +K+AVWTTV        + ++P+A S++E +P     S+WY I +RT LV S++ V   +P FGLVM+LIGS +++LV +I+P  CFL IV 
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISATLVHILLCQKLQE
        R+ T  Q    + II +G IS+ +       K+ E
Subjt:  REATKMQSSSSISIIGLGIISATLVHILLCQKLQE

AT2G41190.1 Transmembrane amino acid transporter family protein2.2e-2756.45Show/hide
Query:  NMPKHAVTSKVAVWTT-VSP-----MLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMP+    SKVA WTT VSP     +LMNPLARSI+E LP  +S++ W  +LLRT LV SS+C AFL+P FGL+MALIGS +SILVA+I+P +CF+KI+G
Subjt:  NMPKHAVTSKVAVWTT-VSP-----MLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIISATL
         +AT+ Q   S  I+ +G++S TL
Subjt:  REATKMQSSSSISIIGLGIISATL

AT3G09340.1 Transmembrane amino acid transporter family protein8.2e-1136.89Show/hide
Query:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIIS-DSYWYCILLRTTLVVSSICVAFLLPFGLVM-ALIGSFISILVAVIIPTMCFLKIV
        NMP+    SK+AVWT V        + + P+   ++E +PP     SY   I ++T LV+S++ VA   PF  +M AL+GSF++ LV  I P +C+L I+
Subjt:  NMPKHAVTSKVAVWTTV------SPMLMNPLARSIQEQLPPIIS-DSYWYCILLRTTLVVSSICVAFLLPFGLVM-ALIGSFISILVAVIIPTMCFLKIV

Query:  GREATKMQSSSSISIIGLGIIS
            +K Q    + II  GI+S
Subjt:  GREATKMQSSSSISIIGLGIIS

AT5G02170.1 Transmembrane amino acid transporter family protein4.4e-1239.84Show/hide
Query:  NMPKHAVTSKVAVWT-TVSPM-----LMNPLARSIQEQLPPIISD--SYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKI
        NMP H  +SK+AVWT  V+PM      + P+  S++E +P       S    +L RT LV+S++ VA  +P F  V ALIGSFI++L+A+I P +C++ I
Subjt:  NMPKHAVTSKVAVWT-TVSPM-----LMNPLARSIQEQLPPIISD--SYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKI

Query:  VGREATKMQSSSSISIIGLGIIS
        +    T  Q    I I+ +GI+S
Subjt:  VGREATKMQSSSSISIIGLGIIS

AT5G02180.1 Transmembrane amino acid transporter family protein2.7e-1442.98Show/hide
Query:  NMPKHAVTSKVAVWTTV-SPM-----LMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG
        NMPKH   SKVAVWT V +PM      + P+  S++E +P     S    IL RT LV S++ VA  +P F +V ALIGSF+++LVA+I P +C+L I+ 
Subjt:  NMPKHAVTSKVAVWTTV-SPM-----LMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLP-FGLVMALIGSFISILVAVIIPTMCFLKIVG

Query:  REATKMQSSSSISIIGLGIIS
         + +  Q    I II  G++S
Subjt:  REATKMQSSSSISIIGLGIIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACATGCCAAAACACGCTGTTACCTCTAAAGTTGCAGTGTGGACAACAGTTTCACCAATGTTGATGAATCCGTTGGCAAGAAGTATACAGGAGCAACTACCGCCTATAAT
TTCAGATAGCTACTGGTATTGCATTCTTCTAAGAACAACACTTGTTGTTTCTTCTATTTGCGTAGCTTTCCTTCTGCCCTTTGGCCTTGTGATGGCTTTAATTGGCTCAT
TTATCAGCATACTTGTGGCGGTAATAATACCAACAATGTGTTTTTTAAAAATCGTGGGAAGGGAAGCTACAAAGATGCAGAGCAGTTCGAGCATCTCCATTATCGGGCTG
GGCATCATTAGCGCAACCCTCGTACATATTCTTCTTTGTCAGAAATTACAAGAGTTATTT
mRNA sequenceShow/hide mRNA sequence
AACATGCCAAAACACGCTGTTACCTCTAAAGTTGCAGTGTGGACAACAGTTTCACCAATGTTGATGAATCCGTTGGCAAGAAGTATACAGGAGCAACTACCGCCTATAAT
TTCAGATAGCTACTGGTATTGCATTCTTCTAAGAACAACACTTGTTGTTTCTTCTATTTGCGTAGCTTTCCTTCTGCCCTTTGGCCTTGTGATGGCTTTAATTGGCTCAT
TTATCAGCATACTTGTGGCGGTAATAATACCAACAATGTGTTTTTTAAAAATCGTGGGAAGGGAAGCTACAAAGATGCAGAGCAGTTCGAGCATCTCCATTATCGGGCTG
GGCATCATTAGCGCAACCCTCGTACATATTCTTCTTTGTCAGAAATTACAAGAGTTATTT
Protein sequenceShow/hide protein sequence
NMPKHAVTSKVAVWTTVSPMLMNPLARSIQEQLPPIISDSYWYCILLRTTLVVSSICVAFLLPFGLVMALIGSFISILVAVIIPTMCFLKIVGREATKMQSSSSISIIGL
GIISATLVHILLCQKLQELF