; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018473 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018473
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAutophagy-related protein
Genome locationscaffold898:418780..420416
RNA-Seq ExpressionMS018473
SyntenyMS018473
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0005874 - microtubule (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575725.1 Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia]9.3e-5692.37Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGK+KSFK+EFTYEQRF E+FEILAKYPDRVPVIVERY+KCELPEMEKKKYLIPRDMSVGQFIHVLS RLHLAPGKALFVFVKNTLPQTASLM +VYESY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYS+EKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

XP_022145376.1 autophagy-related protein 8i-like [Momordica charantia]3.7e-60100Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYSTEKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

XP_022954168.1 autophagy-related protein 8i-like [Cucurbita moschata]9.3e-5692.37Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGK+KSFK+EFTYEQRF E+FEILAKYPDRVPVIVERY+KCELPEMEKKKYLIPRDMSVGQFIHVLS RLHLAPGKALFVFVKNTLPQTASLM +VYESY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYS+EKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

XP_023514864.1 autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo]2.7e-5592.37Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGK+KSFK+EFTYEQRF E+FEILAKYPDRVPVIVERY+KCELPEMEKKKYLIPRDMSVGQFIHVLS RL LAPGKALFVFVKNTLPQTASLMS+VYESY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYS+EKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

XP_038898685.1 autophagy-related protein 8i-like [Benincasa hispida]7.1e-5692.37Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGK+KSFK+EFTYEQRFEE+FEILAKYPDRVPVIVERY+KCELPEMEKKKYLIPRDMSVGQFIHVLS RLHLAPGKALFVFVKNTLPQT SLMS+VY SY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYS+EKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

TrEMBL top hitse value%identityAlignment
A0A5D3CGI6 Autophagy-related protein1.5e-5489.83Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MG++KSFK+EFTYEQRFEE+FE+LAKYPDRVPVIVERY KCELPEMEKKKYLIPRDMSVGQFIHVLS RL LAPGKALFVFV NTLPQTASLMS+VY+SY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYS+EKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

A0A6J1CW54 Autophagy-related protein1.8e-60100Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYSTEKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

A0A6J1GQC4 Autophagy-related protein4.5e-5692.37Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGK+KSFK+EFTYEQRF E+FEILAKYPDRVPVIVERY+KCELPEMEKKKYLIPRDMSVGQFIHVLS RLHLAPGKALFVFVKNTLPQTASLM +VYESY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYS+EKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

A0A6J1JMM5 Autophagy-related protein1.3e-5591.53Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGK+KSFK+EFTYEQRF E+FEILAKYPDRVPVIVERY+KCELPEMEKKKYLIPRDMSVGQFIHVLS RLHLAPGKALFVFVKNTLPQT SLM +VYESY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYS+EKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

A0A6J1L0B7 Autophagy-related protein1.1e-5490.68Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        MGK+KSFKNEF+YEQR EE+FEIL KYPDRVPVIVERY+KCE PEMEKKKYLIPRDMSVGQFIHVLS RL LAPGKALFVFVKNTLPQTASLMS+VYESY
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KDDDGFLYMCYS+EKTFG
Subjt:  KDDDGFLYMCYSTEKTFG

SwissProt top hitse value%identityAlignment
Q2RBS4 Autophagy-related protein 8D7.4e-4066.67Show/hide
Query:  KSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKD
        K + FK EFT E+R +E+  ++A YPDR+PVIVE++ +  LPEMEK+KYL+P +M VGQFI +L +RLHL+PG ALFVFV NTLPQTA LM SVYESYKD
Subjt:  KSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKD

Query:  D-DGFLYMCYSTEKTFG
        + DGFLY+CYS+EKTFG
Subjt:  D-DGFLYMCYSTEKTFG

Q2XPP5 Autophagy-related protein 8A8.0e-3461.06Show/hide
Query:  SFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDG
        SFK E   E+R  E+  I  KY DR+PVIVE+ DK ++PE++KKKYL+P D++VGQF++V+  R+ L+P KA+FVFVKNTLP TASLMS++YE  KD+DG
Subjt:  SFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDG

Query:  FLYMCYSTEKTFG
        FLYM YS E TFG
Subjt:  FLYMCYSTEKTFG

Q69RC4 Autophagy-related protein 8A8.0e-3461.06Show/hide
Query:  SFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDG
        SFK E   E+R  E+  I  KY DR+PVIVE+ DK ++PE++KKKYL+P D++VGQF++V+  R+ L+P KA+FVFVKNTLP TASLMS++YE  KD+DG
Subjt:  SFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDG

Query:  FLYMCYSTEKTFG
        FLYM YS E TFG
Subjt:  FLYMCYSTEKTFG

Q8S925 Autophagy-related protein 8h6.7e-4165.79Show/hide
Query:  KSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDD
        KSFK++F+ ++R +E+  I+AKYPDR+PVI+E+Y   +LP+MEK KYL+PRDM+VG FIH+LS R+ L P KALFVFV NTLPQTAS M S+Y ++K++D
Subjt:  KSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDD

Query:  GFLYMCYSTEKTFG
        GFLYMCYSTEKTFG
Subjt:  GFLYMCYSTEKTFG

Q9LRP7 Autophagy-related protein 8i2.2e-4472.81Show/hide
Query:  KSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDD
        KSFK ++T ++R  E+ EI+AKYP R+PVI E+Y K +LP +EKKK+L+PRDMSVGQFI++LS RLHL+PGKALFVFV NTLPQTA+LM SVYESYKDDD
Subjt:  KSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDD

Query:  GFLYMCYSTEKTFG
        GF+YMCYS+EKTFG
Subjt:  GFLYMCYSTEKTFG

Arabidopsis top hitse value%identityAlignment
AT2G05630.1 Ubiquitin-like superfamily protein5.7e-3557.52Show/hide
Query:  SFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDG
        SFK+E   E+R  EA  I  KYPDR+PVIVER +K ++P++++KKYL+P D++VGQF++V+  R+ L+P KA+F+FVKN LP TA++MS++YE +KD+DG
Subjt:  SFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDG

Query:  FLYMCYSTEKTFG
        FLYM YS E TFG
Subjt:  FLYMCYSTEKTFG

AT3G06420.1 Ubiquitin-like superfamily protein4.8e-4265.79Show/hide
Query:  KSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDD
        KSFK++F+ ++R +E+  I+AKYPDR+PVI+E+Y   +LP+MEK KYL+PRDM+VG FIH+LS R+ L P KALFVFV NTLPQTAS M S+Y ++K++D
Subjt:  KSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDD

Query:  GFLYMCYSTEKTFG
        GFLYMCYSTEKTFG
Subjt:  GFLYMCYSTEKTFG

AT3G15580.1 Ubiquitin-like superfamily protein1.6e-4572.81Show/hide
Query:  KSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDD
        KSFK ++T ++R  E+ EI+AKYP R+PVI E+Y K +LP +EKKK+L+PRDMSVGQFI++LS RLHL+PGKALFVFV NTLPQTA+LM SVYESYKDDD
Subjt:  KSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDD

Query:  GFLYMCYSTEKTFG
        GF+YMCYS+EKTFG
Subjt:  GFLYMCYSTEKTFG

AT4G21980.1 Ubiquitin-like superfamily protein4.1e-3356.78Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        M KS SFK     E R  E+  I  KYPDR+PVIVE+  + ++P+++KKKYL+P D++VGQF++V+  R+ L   KA+FVFVKNTLP TA+LMS++YE +
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KD+DGFLYM YS E TFG
Subjt:  KDDDGFLYMCYSTEKTFG

AT4G21980.2 Ubiquitin-like superfamily protein4.1e-3356.78Show/hide
Query:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY
        M KS SFK     E R  E+  I  KYPDR+PVIVE+  + ++P+++KKKYL+P D++VGQF++V+  R+ L   KA+FVFVKNTLP TA+LMS++YE +
Subjt:  MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESY

Query:  KDDDGFLYMCYSTEKTFG
        KD+DGFLYM YS E TFG
Subjt:  KDDDGFLYMCYSTEKTFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAATCCAAATCCTTCAAGAATGAGTTTACCTACGAGCAACGATTTGAGGAGGCGTTCGAAATCCTGGCCAAGTATCCTGATCGAGTCCCCGTAATTGTTGAGAG
ATATGACAAATGTGAACTTCCTGAGATGGAAAAGAAGAAGTATCTCATTCCTCGAGACATGTCTGTGGGCCAATTCATCCATGTTTTGAGCAACAGGCTTCATCTAGCAC
CTGGAAAAGCTCTCTTTGTGTTTGTAAAGAATACTTTGCCTCAAACAGCCAGCTTAATGAGTTCAGTGTACGAGTCATACAAGGACGACGATGGCTTTCTATACATGTGT
TACAGCACAGAAAAGACCTTCGGC
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAATCCAAATCCTTCAAGAATGAGTTTACCTACGAGCAACGATTTGAGGAGGCGTTCGAAATCCTGGCCAAGTATCCTGATCGAGTCCCCGTAATTGTTGAGAG
ATATGACAAATGTGAACTTCCTGAGATGGAAAAGAAGAAGTATCTCATTCCTCGAGACATGTCTGTGGGCCAATTCATCCATGTTTTGAGCAACAGGCTTCATCTAGCAC
CTGGAAAAGCTCTCTTTGTGTTTGTAAAGAATACTTTGCCTCAAACAGCCAGCTTAATGAGTTCAGTGTACGAGTCATACAAGGACGACGATGGCTTTCTATACATGTGT
TACAGCACAGAAAAGACCTTCGGC
Protein sequenceShow/hide protein sequence
MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVGQFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDGFLYMC
YSTEKTFG