; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018500 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018500
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold680:4262..5763
RNA-Seq ExpressionMS018500
SyntenyMS018500
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145858.1 pentatricopeptide repeat-containing protein At1g62350-like [Momordica charantia]7.8e-12398.71Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLEL
        MKSTVMGRLQLHFPQ GLRQIQMNPRLHCQTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLEL
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLEL

Query:  SLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDK
        SL VFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDT+AFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDK
Subjt:  SLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDK

Query:  FGEGFAAMVNRECAQYLDSPERLLKDVKPKLV
        FGEGFAAMVNRECAQYLDSPERLLKDVKPKLV
Subjt:  FGEGFAAMVNRECAQYLDSPERLLKDVKPKLV

XP_022955796.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita moschata]3.8e-9376.72Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHC-------QTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ
        MKST+MGRLQLHFPQLG RQ   NP LHC        TICGLRKG RKPLG SRVPS E+I AVQSLKLAKSASK+E VI++KLSRLLKADLFD LAELQ
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHC-------QTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ

Query:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI
        RQN+LELSLQVFKF+RNEEWY+PDL LYH MI M+GKNK+IEMAEE+F+ LK+DGLEPDT+AFNEMMGAYLQ  M ERAVETYELMKASGC PDKLTFKI
Subjt:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI

Query:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLK
        LIK+L++F E FAA+V +ECA++LDSPE+ L+
Subjt:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLK

XP_022980054.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima]1.2e-9475.73Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ
        MKST+MGRLQLH PQLG RQ   NP LHC T       ICGLRKG RKPLG SRVPS E+I AVQSLKLAKSASK+E VI++KLSRLLKADLFD LAELQ
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ

Query:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI
        RQN+LELSLQVFKF+RNEEWY+PDL LYH MI M+GKNK+IEMAEE+F+  K+DGLEPDT+AFNEMMGAYLQ  M ERAVETYELMKASGCTPDKLTFKI
Subjt:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI

Query:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKLV
        LIK+L++F E FAA+V +ECA++LDSPE+ L+DV+ KL+
Subjt:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKLV

XP_023527118.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp. pepo]9.0e-9575.73Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ
        MKST+MGRLQLHFPQLG RQ   NP LHC T       ICGLRKG RKPLG SRVPS E+I AVQSLKLAKSASK+E VI++KLSRLLKADLFD LAELQ
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ

Query:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI
        RQN+LELSLQVFKF+RNEEWY+PDL LYH MI M+GKNK+IEMAEE+F+ LK+DGLEPDT+AFNEMMGAY+Q  M ERAVETYELMKASGC PDKLTFKI
Subjt:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI

Query:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKLV
        LIK+L++F E FAA+V +ECA++LDSPE+ L+DV+ KL+
Subjt:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKLV

XP_038878176.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida]5.8e-9477.22Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ
        MKST+MG LQ HFPQLGLRQ   NP LHC T       ICGLRKGLRKPLG SRVPS EAI AVQSLKLAKS SK+E VI++KLSRLLKADLFD L ELQ
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ

Query:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI
        RQN+LELSLQVFKF++NEEWY+PDL LYHGMI+M GKNK+IEMAEEIF+ LKKDGLEPD +AFNEMMGAYLQ  M ERAVETYELMKASGCTPDKLTFKI
Subjt:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI

Query:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPK
        LIK+L+KF E FAA+V +EC  YLDSPE+ L DV+ K
Subjt:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPK

TrEMBL top hitse value%identityAlignment
A0A5A7TQZ8 Pentatricopeptide repeat-containing protein4.2e-9073.11Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ
        MKST+MGRLQLHFPQLGLRQ   N  LHC T       ICGLRKGL+KPLG SRVPS EAI AVQSLKLAK  SK+E VI+TKLSRLLKADLFD L ELQ
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ

Query:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI
        RQN+LELSLQVFKF++NEEWY+PDL LYHGMIMM+GKNK+IEMAEE+F+ L+KDGLEPDT+AFNEMMGAYLQ  M ERA +TY LM ASGCTPDKLTFKI
Subjt:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI

Query:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKL
        LIK+L+KF E FA +V ++C +YLD+P++   D   KL
Subjt:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKL

A0A5D3CZ95 Pentatricopeptide repeat-containing protein9.4e-9072.69Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ
        MKST+MGRLQLHFP+LGLRQ   N  LHC T       ICGLRKGL+KPLG SRVPS EAI AVQSLKLAK  SK+E VI+TKLSRLLKADLFD L ELQ
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ

Query:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI
        RQN+LELSLQVFKF++NEEWY+PDL LYHGMIMM+GKNK+IEMAEE+F+ L+KDGLEPDT+AFNEMMGAYLQ  M ERA +TY LM ASGCTPDKLTFKI
Subjt:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI

Query:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKL
        LIK+L+KF E FA +V ++C +YLD+P++   D   KL
Subjt:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKL

A0A6J1CWI0 pentatricopeptide repeat-containing protein At1g62350-like3.8e-12398.71Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLEL
        MKSTVMGRLQLHFPQ GLRQIQMNPRLHCQTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLEL
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLEL

Query:  SLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDK
        SL VFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDT+AFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDK
Subjt:  SLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDK

Query:  FGEGFAAMVNRECAQYLDSPERLLKDVKPKLV
        FGEGFAAMVNRECAQYLDSPERLLKDVKPKLV
Subjt:  FGEGFAAMVNRECAQYLDSPERLLKDVKPKLV

A0A6J1GUU8 pentatricopeptide repeat-containing protein At1g62350-like1.8e-9376.72Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHC-------QTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ
        MKST+MGRLQLHFPQLG RQ   NP LHC        TICGLRKG RKPLG SRVPS E+I AVQSLKLAKSASK+E VI++KLSRLLKADLFD LAELQ
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHC-------QTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ

Query:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI
        RQN+LELSLQVFKF+RNEEWY+PDL LYH MI M+GKNK+IEMAEE+F+ LK+DGLEPDT+AFNEMMGAYLQ  M ERAVETYELMKASGC PDKLTFKI
Subjt:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI

Query:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLK
        LIK+L++F E FAA+V +ECA++LDSPE+ L+
Subjt:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLK

A0A6J1IY98 pentatricopeptide repeat-containing protein At1g62350-like5.7e-9575.73Show/hide
Query:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ
        MKST+MGRLQLH PQLG RQ   NP LHC T       ICGLRKG RKPLG SRVPS E+I AVQSLKLAKSASK+E VI++KLSRLLKADLFD LAELQ
Subjt:  MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQT-------ICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQ

Query:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI
        RQN+LELSLQVFKF+RNEEWY+PDL LYH MI M+GKNK+IEMAEE+F+  K+DGLEPDT+AFNEMMGAYLQ  M ERAVETYELMKASGCTPDKLTFKI
Subjt:  RQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKI

Query:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKLV
        LIK+L++F E FAA+V +ECA++LDSPE+ L+DV+ KL+
Subjt:  LIKSLDKFGEGFAAMVNRECAQYLDSPERLLKDVKPKLV

SwissProt top hitse value%identityAlignment
O82178 Pentatricopeptide repeat-containing protein At2g351309.9e-1236.36Show/hide
Query:  KPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDKFG
        KP++  Y  ++    +  L E AEEIF  L++DGLEPD   +N +M +Y +AG    A E + LM+  GC PD+ ++ I++ +  + G
Subjt:  KPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDKFG

Q1PFH7 Pentatricopeptide repeat-containing protein At1g623506.8e-2133.33Show/hide
Query:  SPEAIHAVQSLKLAKSAS-KLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDG
        S E + A + LK  ++ S +L+  I + +SRLLK+DL  VLAE QRQNQ+ L +++++ VR E WY+PD+  Y  M+MML +NK ++  ++++  LKK+ 
Subjt:  SPEAIHAVQSLKLAKSAS-KLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDG

Query:  LEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSL-----------DKFGEGFAAMVNRECAQYLDSPERLLKD
        +  D   F +++  +L   +   A+  Y  M+ S   P  L F++++K L           D F E F  M+        D PE + +D
Subjt:  LEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSL-----------DKFGEGFAAMVNRECAQYLDSPERLLKD

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic1.7e-1131.82Show/hide
Query:  SSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGL
        ++++ S +AI    S+ L + A+K          +LL   + + L E     + E ++QVF+ +R + WYKP++ +Y  +I+MLGK K  E A E+F  +
Subjt:  SSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGL

Query:  KKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKAS-GCTPDKLTFKILIKS
          +G   + + +  ++ AY ++G  + A    E MK+S  C PD  T+ ILIKS
Subjt:  KKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKAS-GCTPDKLTFKILIKS

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic2.2e-1132.77Show/hide
Query:  CGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKP-DLTLYHGMIMMLGKN
        CG R   R PL   R+ S EAI ++QSLK A        +    L RL+K+DL  VL EL RQ+   L++ V   +R E  Y P DL LY  ++  L +N
Subjt:  CGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKP-DLTLYHGMIMMLGKN

Query:  KLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASG-----CTPDKLTFKILIKSLDKFGE
        K  +  + +   +       D +A  +++ A + A   E  V  Y LM+ SG        D+   ++L K L + GE
Subjt:  KLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASG-----CTPDKLTFKILIKSLDKFGE

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.2e-2035.14Show/hide
Query:  EAIHAVQSLK-LAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLE
        EA+  +  LK L +   KL+  I T + RLLK D+  V+ EL+RQ +  L++++F+ ++ +EWY+PD+ +Y  +I+ L K+K ++ A  ++  +KK+ L 
Subjt:  EAIHAVQSLK-LAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLE

Query:  PDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSL
        PD+Q + E++  +L+ G    A+  YE M  S   P++L F++L+K L
Subjt:  PDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSL

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein4.9e-2233.33Show/hide
Query:  SPEAIHAVQSLKLAKSAS-KLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDG
        S E + A + LK  ++ S +L+  I + +SRLLK+DL  VLAE QRQNQ+ L +++++ VR E WY+PD+  Y  M+MML +NK ++  ++++  LKK+ 
Subjt:  SPEAIHAVQSLKLAKSAS-KLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDG

Query:  LEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSL-----------DKFGEGFAAMVNRECAQYLDSPERLLKD
        +  D   F +++  +L   +   A+  Y  M+ S   P  L F++++K L           D F E F  M+        D PE + +D
Subjt:  LEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSL-----------DKFGEGFAAMVNRECAQYLDSPERLLKD

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.6e-1232.77Show/hide
Query:  CGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKP-DLTLYHGMIMMLGKN
        CG R   R PL   R+ S EAI ++QSLK A        +    L RL+K+DL  VL EL RQ+   L++ V   +R E  Y P DL LY  ++  L +N
Subjt:  CGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKP-DLTLYHGMIMMLGKN

Query:  KLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASG-----CTPDKLTFKILIKSLDKFGE
        K  +  + +   +       D +A  +++ A + A   E  V  Y LM+ SG        D+   ++L K L + GE
Subjt:  KLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASG-----CTPDKLTFKILIKSLDKFGE

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein8.3e-2235.14Show/hide
Query:  EAIHAVQSLK-LAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLE
        EA+  +  LK L +   KL+  I T + RLLK D+  V+ EL+RQ +  L++++F+ ++ +EWY+PD+ +Y  +I+ L K+K ++ A  ++  +KK+ L 
Subjt:  EAIHAVQSLK-LAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLE

Query:  PDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSL
        PD+Q + E++  +L+ G    A+  YE M  S   P++L F++L+K L
Subjt:  PDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSL

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain3.6e-2534.87Show/hide
Query:  RKPLGSSRVPSPEAIHAVQSLKLA----------------KSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHG
        RKPL   R+ S EAI AVQ+LK A                 S++ L+ VI +K  RLLK D+  VL EL RQN+  L+L+VF+ +R E WYKP + +Y  
Subjt:  RKPLGSSRVPSPEAIHAVQSLKLA----------------KSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHG

Query:  MIMMLGKNKLIEMAEEIFNGLKKD-GLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDKFGE-GFAAMVNRECAQY
        MI ++  N L+E    +++ +K + GL  + + FN ++   L   + +  ++ Y  M++ G  PD+ +F++L+  L+  GE G +A+V ++  +Y
Subjt:  MIMMLGKNKLIEMAEEIFNGLKKD-GLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDKFGE-GFAAMVNRECAQY

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein1.2e-1231.82Show/hide
Query:  SSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGL
        ++++ S +AI    S+ L + A+K          +LL   + + L E     + E ++QVF+ +R + WYKP++ +Y  +I+MLGK K  E A E+F  +
Subjt:  SSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRNEEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGL

Query:  KKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKAS-GCTPDKLTFKILIKS
          +G   + + +  ++ AY ++G  + A    E MK+S  C PD  T+ ILIKS
Subjt:  KKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKAS-GCTPDKLTFKILIKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTACTGTAATGGGGCGTCTGCAACTCCATTTTCCTCAATTGGGTCTCCGCCAAATTCAAATGAACCCACGCCTCCATTGCCAAACCATCTGTGGCCTCAGAAA
GGGGCTGCGCAAGCCCTTGGGGAGCTCGAGGGTGCCCTCCCCTGAGGCTATTCATGCCGTTCAGTCCCTCAAGCTCGCAAAATCCGCCTCGAAATTGGAGCACGTAATCA
GCACCAAGCTCAGTAGATTGCTGAAAGCAGACTTGTTTGATGTTCTCGCCGAATTGCAGAGACAAAACCAACTCGAGCTATCGCTTCAGGTCTTCAAATTTGTGCGGAAT
GAAGAATGGTACAAGCCAGACTTAACCTTATACCATGGGATGATTATGATGTTGGGAAAGAACAAACTCATTGAAATGGCTGAAGAGATCTTCAACGGGTTAAAAAAGGA
TGGGTTAGAACCAGACACACAAGCTTTTAACGAGATGATGGGAGCATATTTGCAAGCGGGCATGGCCGAGAGAGCGGTGGAGACGTATGAATTAATGAAAGCATCAGGTT
GTACGCCAGACAAACTGACTTTCAAGATTTTGATCAAGAGTCTAGACAAGTTTGGGGAAGGGTTTGCTGCAATGGTGAACAGAGAATGTGCTCAGTACTTGGATTCTCCA
GAGAGGTTGCTCAAAGATGTCAAACCGAAGCTCGTG
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTACTGTAATGGGGCGTCTGCAACTCCATTTTCCTCAATTGGGTCTCCGCCAAATTCAAATGAACCCACGCCTCCATTGCCAAACCATCTGTGGCCTCAGAAA
GGGGCTGCGCAAGCCCTTGGGGAGCTCGAGGGTGCCCTCCCCTGAGGCTATTCATGCCGTTCAGTCCCTCAAGCTCGCAAAATCCGCCTCGAAATTGGAGCACGTAATCA
GCACCAAGCTCAGTAGATTGCTGAAAGCAGACTTGTTTGATGTTCTCGCCGAATTGCAGAGACAAAACCAACTCGAGCTATCGCTTCAGGTCTTCAAATTTGTGCGGAAT
GAAGAATGGTACAAGCCAGACTTAACCTTATACCATGGGATGATTATGATGTTGGGAAAGAACAAACTCATTGAAATGGCTGAAGAGATCTTCAACGGGTTAAAAAAGGA
TGGGTTAGAACCAGACACACAAGCTTTTAACGAGATGATGGGAGCATATTTGCAAGCGGGCATGGCCGAGAGAGCGGTGGAGACGTATGAATTAATGAAAGCATCAGGTT
GTACGCCAGACAAACTGACTTTCAAGATTTTGATCAAGAGTCTAGACAAGTTTGGGGAAGGGTTTGCTGCAATGGTGAACAGAGAATGTGCTCAGTACTTGGATTCTCCA
GAGAGGTTGCTCAAAGATGTCAAACCGAAGCTCGTG
Protein sequenceShow/hide protein sequence
MKSTVMGRLQLHFPQLGLRQIQMNPRLHCQTICGLRKGLRKPLGSSRVPSPEAIHAVQSLKLAKSASKLEHVISTKLSRLLKADLFDVLAELQRQNQLELSLQVFKFVRN
EEWYKPDLTLYHGMIMMLGKNKLIEMAEEIFNGLKKDGLEPDTQAFNEMMGAYLQAGMAERAVETYELMKASGCTPDKLTFKILIKSLDKFGEGFAAMVNRECAQYLDSP
ERLLKDVKPKLV