CuGenDBv2

Gene ID	MS018512
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	scaffold680:227943..228143
RNA-Seq Expression	MS018512
Synteny	MS018512
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

ATL62595.1 ATP synthase CF1 alpha subunit [Mostuea sp. Bremer et al. 5077]

2.9e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

QTJ26326.1 ATP synthase CF1 alpha subunit [Justicia ventricosa]

2.9e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

YP_009628147.1 ATP synthase CF1 alpha subunit [Clinacanthus nutans]

2.9e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

YP_009662603.1 ATP synthase CF1 alpha subunit [Amphilophium dolichoides]

2.9e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

YP_778475.1 ATP synthase CF1 alpha subunit [Jasminum nudiflorum]

2.9e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

TrEMBL top hits

e value

%identity

Alignment

A0A1W6CAP0 ATP synthase subunit alpha

1.4e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

A0A411DAV6 ATP synthase subunit alpha, chloroplastic

1.4e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

A0A411DAW5 ATP synthase subunit alpha, chloroplastic

1.4e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

A0A482FEA8 ATP synthase subunit alpha, chloroplastic

1.4e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

A0A5C0PWP0 ATP synthase subunit alpha, chloroplastic

1.4e-22

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

SwissProt top hits

e value

%identity

Alignment

B1A920 ATP synthase subunit alpha, chloroplastic

3.3e-24

83.58

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL E G
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

B1NWD5 ATP synthase subunit alpha, chloroplastic

3.3e-24

83.58

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL E G
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

Q06RE6 ATP synthase subunit alpha, chloroplastic

3.8e-25

85.07

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL EGG
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

Q09X32 ATP synthase subunit alpha, chloroplastic

3.3e-24

83.58

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL E G
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

Q8S8Y3 ATP synthase subunit alpha, chloroplastic

3.3e-24

83.58

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVTTL E G
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

8.0e-18

59.72

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Query:  AIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQ---------QGETTICVYVAIGQKASSMAQVVTTLHE
        A+DS++PIGRG REL+IGDRQTGKT +A DTILNQ         + ET  CVYVAIGQK S++ Q++ TL E
Subjt:  AIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQ---------QGETTICVYVAIGQKASSMAQVVTTLHE

ATCG00120.1 ATP synthase subunit alpha

6.7e-25

82.09

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Query:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG
        + AIDSMIPIGRG RELIIGDRQTGKT +ATDTILNQQG+  ICVYVAIGQKASS+AQVVT+L E G
Subjt:  IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

ATMG01190.1 ATP synthase subunit 1

5.2e-17

58.33

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Query:  AIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQ---------QGETTICVYVAIGQKASSMAQVVTTLHE
        A+DS++PIGRG REL+IG RQTGKT +A DTILNQ         + ET  CVYVAIGQK S++ Q++ TL E
Subjt:  AIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQ---------QGETTICVYVAIGQKASSMAQVVTTLHE

Sequences

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CDS sequence

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ATTTATGCTATTGATTCGATGATTCCTATTGGACGTGGTCACCGAGAATTAATTATTGGGGACAGACAGACCGGTAAAACTGTACTAGCCACAGATACGATTCTCAATCA
ACAAGGAGAAACTACAATATGTGTTTATGTAGCCATTGGTCAAAAAGCATCTTCTATGGCTCAAGTAGTGACTACTTTACACGAAGGGGGC

mRNA sequence

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Protein sequence

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IYAIDSMIPIGRGHRELIIGDRQTGKTVLATDTILNQQGETTICVYVAIGQKASSMAQVVTTLHEGG

MS018512 (gene) of Bitter gourd (TR) v1 genome