CuGenDBv2

Gene ID	MS018521
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Target of Myb protein 1 isoform X2
Genome location	scaffold417:191496..192135
RNA-Seq Expression	MS018521
Synteny	MS018521
Gene Ontology terms	GO:0043328 - protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process) GO:0016020 - membrane (cellular component) GO:0035091 - phosphatidylinositol binding (molecular function) GO:0043130 - ubiquitin binding (molecular function)
InterPro domains	IPR044836 - TOM1-like protein, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142659.1 TOM1-like protein 5 isoform X1 [Cucumis sativus]

1.4e-82

89.44

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVLARHDALLSGQF+STQN F+ E+ G SRLPANH NHDEGEDEEEA+QLFRRLRKGKACVRPEDEEDSSEERPSLG LGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPI+EK STT ++QHGQGVSIPPPPVKHAEREKFFKDKK+DVG GHMRGLSLHSRNASSSRSGSIDF+ES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

XP_011653749.1 TOM1-like protein 5 isoform X2 [Cucumis sativus]

1.4e-82

89.44

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVLARHDALLSGQF+STQN F+ E+ G SRLPANH NHDEGEDEEEA+QLFRRLRKGKACVRPEDEEDSSEERPSLG LGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPI+EK STT ++QHGQGVSIPPPPVKHAEREKFFKDKK+DVG GHMRGLSLHSRNASSSRSGSIDF+ES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

XP_022149373.1 TOM1-like protein 5 [Momordica charantia]

5.1e-93

99.44

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

XP_031740100.1 TOM1-like protein 5 isoform X3 [Cucumis sativus]

1.4e-82

89.44

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVLARHDALLSGQF+STQN F+ E+ G SRLPANH NHDEGEDEEEA+QLFRRLRKGKACVRPEDEEDSSEERPSLG LGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPI+EK STT ++QHGQGVSIPPPPVKHAEREKFFKDKK+DVG GHMRGLSLHSRNASSSRSGSIDF+ES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

XP_031740101.1 TOM1-like protein 5 isoform X4 [Cucumis sativus]

1.4e-82

89.44

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVLARHDALLSGQF+STQN F+ E+ G SRLPANH NHDEGEDEEEA+QLFRRLRKGKACVRPEDEEDSSEERPSLG LGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPI+EK STT ++QHGQGVSIPPPPVKHAEREKFFKDKK+DVG GHMRGLSLHSRNASSSRSGSIDF+ES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXZ2 Uncharacterized protein

6.8e-83

89.44

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVLARHDALLSGQF+STQN F+ E+ G SRLPANH NHDEGEDEEEA+QLFRRLRKGKACVRPEDEEDSSEERPSLG LGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPI+EK STT ++QHGQGVSIPPPPVKHAEREKFFKDKK+DVG GHMRGLSLHSRNASSSRSGSIDF+ES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

A0A5D3CT25 Target of Myb protein 1 isoform X2

9.8e-82

88.33

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVLARHDALLSGQF+STQN F+ E+ G SRLPANH NHDEGEDEEEAEQL+RRLRKGKACV PEDEEDSSEERPSLG LGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPI+EK STT ++QHGQGV IPPPPVKHAEREKFFK+KKMDVG GHMRGLSLHSRNASSSRSGSIDF+ES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

A0A6J1D6L6 TOM1-like protein 5

2.5e-93

99.44

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

A0A6J1HMQ1 TOM1-like protein 5 isoform X2

8.6e-70

84.53

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVL RHDALLSGQF+ST N F+ E+ GRSR  ANH N DEGED EEAEQLFRRLRKGKACVRPEDE  SS ERPSLGSLGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVG-SGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPI+EK STTSDMQ GQGV IPPPPVKHAEREKFFKDKK   G S HMRGLSLHSRNASSS SGSID SES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVG-SGHMRGLSLHSRNASSSRSGSIDFSES

A0A6J1HRT0 TOM1-like protein 5 isoform X1

8.6e-70

84.53

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI
        RDEKIVC AIELNEKLQKVL RHDALLSGQF+ST N F+ E+ GRSR  ANH N DEGED EEAEQLFRRLRKGKACVRPEDE  SS ERPSLGSLGLSI
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSI

Query:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVG-SGHMRGLSLHSRNASSSRSGSIDFSES
        PVERANRPIIRPI+EK STTSDMQ GQGV IPPPPVKHAEREKFFKDKK   G S HMRGLSLHSRNASSS SGSID SES
Subjt:  PVERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVG-SGHMRGLSLHSRNASSSRSGSIDFSES

SwissProt top hits

e value

%identity

Alignment

Q6NQK0 TOM1-like protein 4

3.5e-04

24.18

Show/hide

Query:  DEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPED-------EEDSSEERPSLG
        DE+++C  + LN+ LQ VL RHD + +   + +    +        +  NH + D+  D+E A    R     +  V   D         D  + + +  
Subjt:  DEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPED-------EEDSSEERPSLG

Query:  SLGLSIP-------VERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGS-----GHMRGLSLHS
        S G+  P          ++ P+    + + S +S++      ++PPPP +H +R++FF+      GS     G  R LSL S
Subjt:  SLGLSIP-------VERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGS-----GHMRGLSLHS

Q9FFQ0 TOM1-like protein 5

7.1e-37

48.11

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFI-----STQNNF---------------------SDEDTGRSRLPAN--HCNHDEGEDEEEAEQLFRRLR
        RDEK V  AIELNE+LQ++L RH+ LLSG+       +T N +                     S+ +T  S   +N  H   +E ++EEE EQLFRRLR
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFI-----STQNNF---------------------SDEDTGRSRLPAN--HCNHDEGEDEEEAEQLFRRLR

Query:  KGKACVRPEDEEDSSEERPSLGSLGLSIPVERANRPIIRPINEKASTTSDMQHGQG--VSIPPPPVKHAEREKFFKDKKMDVG---SGHMRGLSLHSRNA
        KGKA  RPEDEE+ S   P  G  G +I  ER NRP+IRP+  + ++     H Q   V IPPPP KH EREKFFK+ K D      GHMRGLSLHSR+ 
Subjt:  KGKACVRPEDEEDSSEERPSLGSLGLSIPVERANRPIIRPINEKASTTSDMQHGQG--VSIPPPPVKHAEREKFFKDKKMDVG---SGHMRGLSLHSRNA

Query:  SSSRSGSIDFSE
        SSSRSGS+DFS+
Subjt:  SSSRSGSIDFSE

Arabidopsis top hits

e value

%identity

Alignment

AT1G76970.1 Target of Myb protein 1

2.5e-05

24.18

Show/hide

Query:  DEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPED-------EEDSSEERPSLG
        DE+++C  + LN+ LQ VL RHD + +   + +    +        +  NH + D+  D+E A    R     +  V   D         D  + + +  
Subjt:  DEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPED-------EEDSSEERPSLG

Query:  SLGLSIP-------VERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGS-----GHMRGLSLHS
        S G+  P          ++ P+    + + S +S++      ++PPPP +H +R++FF+      GS     G  R LSL S
Subjt:  SLGLSIP-------VERANRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGS-----GHMRGLSLHS

AT5G63640.1 ENTH/VHS/GAT family protein

5.0e-38

48.11

Show/hide

Query:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFI-----STQNNF---------------------SDEDTGRSRLPAN--HCNHDEGEDEEEAEQLFRRLR
        RDEK V  AIELNE+LQ++L RH+ LLSG+       +T N +                     S+ +T  S   +N  H   +E ++EEE EQLFRRLR
Subjt:  RDEKIVCCAIELNEKLQKVLARHDALLSGQFI-----STQNNF---------------------SDEDTGRSRLPAN--HCNHDEGEDEEEAEQLFRRLR

Query:  KGKACVRPEDEEDSSEERPSLGSLGLSIPVERANRPIIRPINEKASTTSDMQHGQG--VSIPPPPVKHAEREKFFKDKKMDVG---SGHMRGLSLHSRNA
        KGKA  RPEDEE+ S   P  G  G +I  ER NRP+IRP+  + ++     H Q   V IPPPP KH EREKFFK+ K D      GHMRGLSLHSR+ 
Subjt:  KGKACVRPEDEEDSSEERPSLGSLGLSIPVERANRPIIRPINEKASTTSDMQHGQG--VSIPPPPVKHAEREKFFKDKKMDVG---SGHMRGLSLHSRNA

Query:  SSSRSGSIDFSE
        SSSRSGS+DFS+
Subjt:  SSSRSGSIDFSE

Sequences

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CDS sequence

Show/hide CDS sequence

TGTTTCATCATGGTCAGGGATGAGAAGATCGTTTGTTGTGCAATTGAATTGAACGAAAAGCTTCAAAAGGTCCTTGCAAGACACGATGCCCTCCTCTCGGGTCAGTTCAT
ATCGACTCAAAATAATTTCAGCGATGAAGATACCGGTAGGTCCAGATTGCCTGCAAATCATTGTAACCACGACGAAGGGGAAGATGAAGAAGAGGCTGAACAACTTTTCC
GAAGGCTCCGAAAAGGAAAAGCTTGTGTAAGACCTGAAGATGAAGAAGATTCATCAGAGGAGCGACCATCGTTGGGTTCGCTAGGATTGTCAATTCCAGTTGAGCGAGCA
AACCGTCCGATCATTCGACCGATCAACGAGAAGGCATCAACGACATCAGATATGCAGCATGGGCAGGGTGTTTCAATACCACCACCACCAGTAAAACATGCAGAAAGGGA
GAAGTTCTTCAAGGATAAAAAGATGGATGTTGGAAGTGGGCATATGAGAGGCCTCTCTTTACACAGTCGTAACGCCAGCAGCTCCCGCAGTGGAAGCATAGATTTCAGTG
AGTCA

mRNA sequence

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Protein sequence

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CFIMVRDEKIVCCAIELNEKLQKVLARHDALLSGQFISTQNNFSDEDTGRSRLPANHCNHDEGEDEEEAEQLFRRLRKGKACVRPEDEEDSSEERPSLGSLGLSIPVERA
NRPIIRPINEKASTTSDMQHGQGVSIPPPPVKHAEREKFFKDKKMDVGSGHMRGLSLHSRNASSSRSGSIDFSES

MS018521 (gene) of Bitter gourd (TR) v1 genome