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MS018523 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018523
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold417:201279..201416
RNA-Seq ExpressionMS018523
SyntenyMS018523
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN84133.1 hypothetical protein VITISV_000111 [Vitis vinifera]1.5e-0958.7Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL HPSF  NF++WW   +  GW G  FM RL+S+K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
RVW27595.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.4e-0956.52Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL HPSF  NF++WW   +  GW G  FM RL+ +K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
RVW40762.1 hypothetical protein CK203_080675 [Vitis vinifera]5.7e-0956.52Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL HPSF  NF++WW   +  GW G  FM RL+ +K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
RVW93866.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.3e-0954.35Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL H +F  NF+DWW   + +GW G+ FM RL+ +K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
XP_021820446.1 uncharacterized protein LOC110762145 [Prunus avium]3.0e-1060.87Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL+HP F  NFKDWW     +GW GF FM RL+++K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
TrEMBL top hitse value%identityAlignment
A0A438DZA6 Reverse transcriptase domain-containing protein2.8e-0956.52Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL HPSF  NF++WW   +  GW G  FM RL+ +K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
A0A438IAX3 Transposon TX1 uncharacterized 149 kDa protein1.6e-0954.35Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL H +F  NF+DWW   + +GW G+ FM RL+ +K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
A0A6P5T1U8 uncharacterized protein LOC1107621451.5e-1060.87Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL+HP F  NFKDWW     +GW GF FM RL+++K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
A5BM49 Reverse transcriptase domain-containing protein3.6e-0956.52Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL HPSF  NF++WW   +  GW G  FM RL+ +K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
A5C9W0 Reverse transcriptase domain-containing protein7.2e-1058.7Show/hide
Query:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
        GP PF+FENMWL HPSF  NF++WW   +  GW G  FM RL+S+K
Subjt:  GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGCCAAGGCCTTTCAAATTTGAGAATATGTGGCTTGATCATCCCTCCTTTTTGATGAATTTCAAGGATTGGTGGGAAGCTCTTCGACCCTTGGGCTGGTCCGGTTTTGC
CTTCATGGACAGGCTTAGAAGCATAAAA
mRNA sequenceShow/hide mRNA sequence
GGGCCAAGGCCTTTCAAATTTGAGAATATGTGGCTTGATCATCCCTCCTTTTTGATGAATTTCAAGGATTGGTGGGAAGCTCTTCGACCCTTGGGCTGGTCCGGTTTTGC
CTTCATGGACAGGCTTAGAAGCATAAAA
Protein sequenceShow/hide protein sequence
GPRPFKFENMWLDHPSFLMNFKDWWEALRPLGWSGFAFMDRLRSIK