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MS018526 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018526
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalpain-type cysteine protease DEK1
Genome locationscaffold417:275666..275927
RNA-Seq ExpressionMS018526
SyntenyMS018526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011736.1 Epimerase family protein SDR39U1-like, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]8.1e-0947.5Show/hide
Query:  IGDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLSSFGFCHPLSDREMVEVVALLSILSNVKV-IPGRSVCFWSPNPSE
        +G  P C +FPCLYHLS   L+ M        A    FGF +PLSDRE  +V +LLS L  V +    R+V FWSPNPS+
Subjt:  IGDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLSSFGFCHPLSDREMVEVVALLSILSNVKV-IPGRSVCFWSPNPSE
TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]1.4e-0850Show/hide
Query:  GDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLS-SFGFCHPLSDREMVEVVALLSILSNVKVIPG-RSVCFWSPNPSE
        G++PLC +FPCLYHLS  K H MA   + +    S SFGF   LSDRE   VVAL+S+L +     G R V  WSP P E
Subjt:  GDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLS-SFGFCHPLSDREMVEVVALLSILSNVKVIPG-RSVCFWSPNPSE
TrEMBL top hitse value%identityAlignment
A0A5D3CI74 Calpain-type cysteine protease DEK16.7e-0950Show/hide
Query:  GDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLS-SFGFCHPLSDREMVEVVALLSILSNVKVIPG-RSVCFWSPNPSE
        G++PLC +FPCLYHLS  K H MA   + +    S SFGF   LSDRE   VVAL+S+L +     G R V  WSP P E
Subjt:  GDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLS-SFGFCHPLSDREMVEVVALLSILSNVKVIPG-RSVCFWSPNPSE
A0A6J1DFI2 uncharacterized protein LOC1110196246.5e-0439.53Show/hide
Query:  FFFRIFKIGDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLS-SFGFCHPLSDREMVEVVALLSILSNVKVIPGR-SVCFWSPNP
        +F+    +G+KPL   FP +Y LS+KKL S+A +        S S G    L+D E +E+ ALL +L +V    GR  V  W PNP
Subjt:  FFFRIFKIGDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLS-SFGFCHPLSDREMVEVVALLSILSNVKVIPGR-SVCFWSPNP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTTTTTAGGATTTTTAAAATAGGAGACAAGCCCCTTTGTGCTATGTTTCCTTGTTTATACCATCTTTCTGATAAGAAGTTGCATTCGATGGCCTCTATCTGCATGCC
TTCCTCAGCTCTTCTTTCTTCCTTTGGGTTTTGTCATCCTTTGTCAGATAGAGAGATGGTGGAAGTGGTAGCCCTTTTATCGATTTTGAGTAACGTTAAAGTGATTCCAG
GGAGAAGTGTCTGCTTTTGGTCCCCCAATCCTTCGGAG
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTAGGATTTTTAAAATAGGAGACAAGCCCCTTTGTGCTATGTTTCCTTGTTTATACCATCTTTCTGATAAGAAGTTGCATTCGATGGCCTCTATCTGCATGCC
TTCCTCAGCTCTTCTTTCTTCCTTTGGGTTTTGTCATCCTTTGTCAGATAGAGAGATGGTGGAAGTGGTAGCCCTTTTATCGATTTTGAGTAACGTTAAAGTGATTCCAG
GGAGAAGTGTCTGCTTTTGGTCCCCCAATCCTTCGGAG
Protein sequenceShow/hide protein sequence
FFFRIFKIGDKPLCAMFPCLYHLSDKKLHSMASICMPSSALLSSFGFCHPLSDREMVEVVALLSILSNVKVIPGRSVCFWSPNPSE