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MS018532 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018532
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold417:387786..387935
RNA-Seq ExpressionMS018532
SyntenyMS018532
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW91431.1 putative ribonuclease H protein [Vitis vinifera]9.2e-0546.94Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSS
        +G  LWQ    A LW +W  RN+R+F+ KE++ + VW+LI F +SLW+S
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSS

RVW92839.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.6e-0444.9Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSS
        +G  LWQA   A LW +W  RN R+F+GK ++++ +W++I F  SLW S
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSS

TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]2.1e-0444Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI
        +G FLW A   A +W IW  RN R+F+GK++ +  +  L+RF+ SLW+S+
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]9.2e-0546Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI
        +G FLW+AC  A LW +W   N R+F G E+    +W +IR++ SLW SI
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.3e-0676.47Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVD
        +G FLWQACF A+LWGIWL RN+RLF+G EKSVD
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVD

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909764.5e-0546Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI
        +G FLW+AC  A LW +W   N R+F G E+    +W +IR++ SLW SI
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI

A0A438I409 Putative ribonuclease H protein4.5e-0546.94Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSS
        +G  LWQ    A LW +W  RN+R+F+ KE++ + VW+LI F +SLW+S
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSS

A0A438I862 LINE-1 retrotransposable element ORF2 protein7.6e-0544.9Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSS
        +G  LWQA   A LW +W  RN R+F+GK ++++ +W++I F  SLW S
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSS

A0A5D3D7T2 Uncharacterized protein1.0e-0444Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI
        +G FLW A   A +W IW  RN R+F+GK++ +  +  L+RF+ SLW+S+
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI

A0A6J1DFI2 uncharacterized protein LOC1110196246.2e-0776.47Show/hide
Query:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVD
        +G FLWQACF A+LWGIWL RN+RLF+G EKSVD
Subjt:  QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGGGTATTTTTTATGGCAGGCTTGTTTTCAGGCTACTTTATGGGGTATTTGGCTAGGGAGGAATCATAGACTATTTAAGGGGAAGGAGAAATCTGTGGACTATGTATG
GGAACTCATTAGATTTAATACTTCGTTATGGAGTTCGATT
mRNA sequenceShow/hide mRNA sequence
CAGGGGTATTTTTTATGGCAGGCTTGTTTTCAGGCTACTTTATGGGGTATTTGGCTAGGGAGGAATCATAGACTATTTAAGGGGAAGGAGAAATCTGTGGACTATGTATG
GGAACTCATTAGATTTAATACTTCGTTATGGAGTTCGATT
Protein sequenceShow/hide protein sequence
QGYFLWQACFQATLWGIWLGRNHRLFKGKEKSVDYVWELIRFNTSLWSSI