; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS018536 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS018536
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2-like
Genome locationscaffold417:460152..460415
RNA-Seq ExpressionMS018536
SyntenyMS018536
Gene Ontology termsGO:0048856 - anatomical structure development (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]4.5e-2353.41Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD
        F+ YPWGRVAF+LL+D+M +   S+G TG+ MGGFI  ++ WAYEVIP+LS PPN++  RI    PR++N   + QP+WK+L  K FD
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD

KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]8.3e-2555.68Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD
        F+ YPWGRVAF+LL+D+M +A  S+G TG+ + GFI  ++ WAYEVIP+LS PPN++A RI    PR++NW A++QP+WK+L  K FD
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]1.4e-2457.3Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGM-GGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD
        F+ YPWGRVAF+LL+D+M +A  S+G TG+ M GGFI  ++ WAYEVIP+LS PPN++A RI    PR++NW A+ QP+WK+L  K FD
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGM-GGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD

TYK12922.1 uncharacterized protein E5676_scaffold255G005170 [Cucumis melo var. makuwa]2.9e-2251.72Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFF
        F++YPWGR+++++ ID++KKA  S   + +G+GGF  AL VWAYE IP L++  N++A RI +GTPRM NW A++ PEWK+L+ K F
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFF

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]8.3e-2555.68Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD
        F+ YPWGRVAF+LL+D+M +A  S+G TG+ + GFI  ++ WAYEVIP+LS PPN++A RI    PR++NW A++QP+WK+L  K FD
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD

TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like2.2e-2353.41Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD
        F+ YPWGRVAF+LL+D+M +   S+G TG+ MGGFI  ++ WAYEVIP+LS PPN++  RI    PR++N   + QP+WK+L  K FD
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD

A0A5A7UD30 Protein Ycf2-like4.0e-2555.68Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD
        F+ YPWGRVAF+LL+D+M +A  S+G TG+ + GFI  ++ WAYEVIP+LS PPN++A RI    PR++NW A++QP+WK+L  K FD
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD

A0A5D3CEX9 Protein Ycf2-like6.8e-2557.3Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGM-GGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD
        F+ YPWGRVAF+LL+D+M +A  S+G TG+ M GGFI  ++ WAYEVIP+LS PPN++A RI    PR++NW A+ QP+WK+L  K FD
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGM-GGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD

A0A5D3CNI7 TF-B3 domain-containing protein1.4e-2251.72Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFF
        F++YPWGR+++++ ID++KKA  S   + +G+GGF  AL VWAYE IP L++  N++A RI +GTPRM NW A++ PEWK+L+ K F
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFF

A0A5D3DCN3 Protein Ycf2-like4.0e-2555.68Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD
        F+ YPWGRVAF+LL+D+M +A  S+G TG+ + GFI  ++ WAYEVIP+LS PPN++A RI    PR++NW A++QP+WK+L  K FD
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31910.1 Domain of unknown function (DUF1985)1.7e-0438Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSL
        F  YPWGRVAF+ LI+ +K     +      +   + AL++W YE +P L
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSL

AT4G08430.1 Ulp1 protease family protein2.7e-0541.51Show/hide
Query:  FNNYPWGRVAFDLL---IDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSL
        F  YPWGRVAFD L   + ++K   DS  + G      + AL+VW YE +P +
Subjt:  FNNYPWGRVAFDLL---IDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSL

AT5G28810.1 Domain of unknown function (DUF1985)1.0e-0440Show/hide
Query:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSL
        F  YPWGRVAFD L+  +K            + G + AL+VW YE +P +
Subjt:  FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSL

AT5G45570.1 Ulp1 protease family protein2.3e-0439.62Show/hide
Query:  FNNYPWGRVAFDLL---IDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSL
        F  YPWGRVAFD L   +  +K   DS  + G      +  L+VW YE +P +
Subjt:  FNNYPWGRVAFDLL---IDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTAATAACTACCCATGGGGAAGGGTAGCATTTGACCTCCTTATTGACTACATGAAAAAGGCGCCAGACAGTCGAGGACTAACAGGAGTAGGGATGGGTGGATTCATATC
TGCACTGATAGTGTGGGCATACGAGGTCATACCTTCACTTAGTATCCCACCAAATTATTACGCACGGAGGATTGGTTATGGCACTCCGCGGATGCTCAACTGGGAAGCCG
AACTACAGCCAGAGTGGAAGGAATTGGCTACAAAGTTTTTTGAC
mRNA sequenceShow/hide mRNA sequence
TTTAATAACTACCCATGGGGAAGGGTAGCATTTGACCTCCTTATTGACTACATGAAAAAGGCGCCAGACAGTCGAGGACTAACAGGAGTAGGGATGGGTGGATTCATATC
TGCACTGATAGTGTGGGCATACGAGGTCATACCTTCACTTAGTATCCCACCAAATTATTACGCACGGAGGATTGGTTATGGCACTCCGCGGATGCTCAACTGGGAAGCCG
AACTACAGCCAGAGTGGAAGGAATTGGCTACAAAGTTTTTTGAC
Protein sequenceShow/hide protein sequence
FNNYPWGRVAFDLLIDYMKKAPDSRGLTGVGMGGFISALIVWAYEVIPSLSIPPNYYARRIGYGTPRMLNWEAELQPEWKELATKFFD